Gene loci information

Transcript annotation

  • This transcript has been annotated as Chitin synthase chs-2.

Parent gene

Gene structure

  • The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.

Chromosome Gene Transcript Category ID Start End
chr_1 g10236 g10236.t2 isoform g10236.t2 8410389 8421073
chr_1 g10236 g10236.t2 exon g10236.t2.exon1 8410389 8410504
chr_1 g10236 g10236.t2 cds g10236.t2.CDS1 8410389 8410504
chr_1 g10236 g10236.t2 exon g10236.t2.exon2 8413478 8414300
chr_1 g10236 g10236.t2 cds g10236.t2.CDS2 8413478 8414300
chr_1 g10236 g10236.t2 exon g10236.t2.exon3 8414359 8415280
chr_1 g10236 g10236.t2 cds g10236.t2.CDS3 8414359 8415280
chr_1 g10236 g10236.t2 exon g10236.t2.exon4 8415342 8417076
chr_1 g10236 g10236.t2 cds g10236.t2.CDS4 8415342 8417076
chr_1 g10236 g10236.t2 exon g10236.t2.exon5 8417135 8417330
chr_1 g10236 g10236.t2 cds g10236.t2.CDS5 8417135 8417330
chr_1 g10236 g10236.t2 exon g10236.t2.exon6 8417390 8417566
chr_1 g10236 g10236.t2 cds g10236.t2.CDS6 8417390 8417566
chr_1 g10236 g10236.t2 exon g10236.t2.exon7 8420142 8420345
chr_1 g10236 g10236.t2 cds g10236.t2.CDS7 8420142 8420345
chr_1 g10236 g10236.t2 exon g10236.t2.exon8 8420409 8420771
chr_1 g10236 g10236.t2 cds g10236.t2.CDS8 8420409 8420771
chr_1 g10236 g10236.t2 exon g10236.t2.exon9 8420834 8421073
chr_1 g10236 g10236.t2 cds g10236.t2.CDS9 8420834 8421073
chr_1 g10236 g10236.t2 TSS g10236.t2 NA NA
chr_1 g10236 g10236.t2 TTS g10236.t2 NA NA

Sequences

>g10236.t2 Gene=g10236 Length=4776
ATGTCTGCAATCAGACATCGGCCCCTGCAGGCGATGCCTGGTGCAGGCGGTGAGAGTGAT
GAAAACTTTTCCGATGACGAGAGTACACCATTGACCCATGATATCTACGGTGGCAGTCAG
CGGACAGTTCATGAAACAAAAGGATGGGATGTGTTTCGCGATCCACCGATAAAAGTTGAT
TCCGGTTCAATGGCCAATCAGGCCTGCATGGAAATAACGGCAAAAATACTCAAACTTGTA
GCGTACATAATTACGTTTATTTTGGTTCTATGTGGAGGCGTCATAGCAAAAGGCTGTGTA
ATTTTTATGTCTGCACAGCTTAAGCGTGACAGAAAAATTCAGTATTGCAATAAAGATTTG
GCACGTGACAAACAATTCATTGCAATTATTCCTGAGGAGGAGCGCATTGCATGGATGTGG
GCTCTTATGATTGCTTTTGCAGTTCCTGAAATTGGTGCACTCATTCGATCAGTGCGTATT
TGTTTTTTCAAGTCATGGAAGTTGCCTCAAAAATCGCACTTCCTTTTTATTTTTCTTATG
GAGTCATTTCATACCATTGGCCTTGTTTTATTAGTCTTTGTTGTGCTACCTGAATTAGAT
TCTGTAAAAGGCGCGATGTTAACAAATTGTCTTTGTGTTGTGCCCGGTATTCTTGGCTTG
CTTTCTTGTACATCAAAAGAAGGCAAGCGAGCAGCAAAAATTATAATGGATTTGGCAGCA
ATTGCTGCACAAGTAACAGGTTTTGTAGTTTGGCCATTGCTTGAAGATCGTCCTGTACTT
TGGATGATTCCTGCCTCTGCATTCATGATTTCATGTGGCTGGTGGGAAAACTATGTTTCA
TCACAAAGTCCATTTGGTATTGTGCGAGCATTGGGACGTGTAAAAGAAGACCTTAAATAT
ACTCGATACTTTGCCTATATGTTCTTGTCAATATGGAAGATTGTGGCCTTCGTTTTTACA
GTCATCATGATTTTATGGTTTGAGGGCGATGACCCCACAAGTATTTTTGGTCTCTTTAGC
AAAGGCTTTGGACCACATAAAATAGTTGTTGAAGAACTTACAACGACCTTCGGCAAATCA
CTTCCTGACTTGATTGATTCCTCACAAATTGGCGATATTGTGCAAATCGATGCATCACAC
AATACAGTCATTCATGTGCTCATAATTCAAATTATTGCCGCTTATATTTGCTACATTTTT
GGTAAATTTGCGTGCAAAATTCTTATTCAGGGCTTCAGTTACGCTTTCCCCGTCAACCTT
ACGATCCCAATTTCAATTTCATTGCTTATCGCAGCATGTGGTATTAGAAATGGAGATCCA
TGCTTCTATCACGGGTCAATTCCCGATTATCTCTTTTTTGAAAGTCCACCAGTATTTAAA
TTAAGCGATTTGGCATCAAAGCAGATGGCTTGGGCTTGGTTGCTTTGGTTATTCTCACAA
TTTTGGATAACACTTCATGTATGGACACCCAAATGTGAACGTTTAGCTACAACTGAAAAA
CTTTTTGTAACACCAATGTACAATGCATTGTTGATTGATCAATCAATGGCGCTCAATAGA
CGACGCGATGATCAAGCTGATGTAAAGACCGAAGATCTTGCTGAAATTGAGAAAGAAAAG
GGTGATGAATACTACGAGACTATCTCTGTCCATACTGATGGCTCTGCTATGCCAAAATCG
AATGTCAAATCGAGTGATCACATCACGAGAATTTATGCTTGCGCAACTATGTGGCATGAA
ACAAAAGACGAAATGATTGAATTTTTGAAATCTATTATGCGTCTTGATGAAGACCAATGT
GCACGTCGTGTTGCTCAAAAATATTTAAGAATTGTTGATCCTGATTATTATGAATTTGAA
ACACATATTTTCTTTGATGATGCTTTCGAAATTTCCGACCATAGCGATGACGATATTCAA
GTGAATCGTTTTGTGAAACTTTTAGTAAGCACAATTGATGAAGCAGCATCAGATGTTCAT
CAAACCAATATTCGATTACGTGCACCAAAGAAATATCCTGCACCATATGGTGGTCGTCTT
GTATGGACATTACCAGGCAAAACTAAAATGATTGCTCATTTGAAAGACAAAGACAGAATT
AGACATCGTAAACGTTGGTCGCAAGTGATGTATATGTATTATTTGCTTGGTCATCGTCTT
ATGGAGCTGCCAATTTCTGTTGATAGAAAGGATGTTATTGCTGAAAATACTTATCTTTTG
ACACTTGATGGTGATATTGATTTCCAACCTAATGCTGTCACATTGCTTATCGATTTGATG
AAAAAGAACAAGAATCTGGGAGCTGCATGTGGTCGTATTCATCCAGTTGGATCTGGTCCT
ATGGTGTGGTATCAAAAGTTCGAATATGCTATTGGTCATTGGCTGCAAAAAGCCACAGAA
CACATGATCGGTTGTGTACTTTGTTCGCCTGGTTGTTTCTCACTCTTCCGTGGCAAGGCA
TTGATGGACGATAATGTCATGAAAAAATATACAACAAGGTCAGATGAAGCACGCCATTAT
GTGCAATACGATCAGGGTGAAGATCGTTGGTTATGTACATTATTACTGCAAAGGGGTTAT
CGAGTCGAATATTCAGCTGCATCAGATGCATATACACATTGTCCAGAAGGTTTCAATGAG
TTTTATAATCAACGTCGTCGATGGGTTCCATCAACAATTGCAAACATTATGGATCTTTTG
GTTGACTATAAACGAACAATTAAAGTTAATGACAACATTTCTATGCTTTACATCTTTTAT
CAAATGCTTCTTATGGGTGGTACAATTCTCGGACCTGGAACAATTTTTCTTATGTTGGTG
GGAGCTTTTGTAGCTGCTTTTAGAATAGACAATTGGACATCATTTCATTACAATATTGTT
CCAATTCTACTATTTATGTTTGTCTGCTTCACATGTAAATCCAACATTCAATTGCTGCTT
GCACAAATTTTATCTACAATGTATGCATTAATTATGATGGCTGTAATTGTCGGTACAGCT
TTACAATTAGGCGAGGATGGTGTCGGCAGTCCATCTGCTATTTTCTTGATGTCAATGGTG
GGGTCATTTTTCATAGCGGCGTGTTTGCATCCGCAAGAATTTTGGTGCATAGCTGCTGGT
ATTATTTATTTGCTTTCAATCCCATCTATGTACTTGCTTTTGATTCTTTATTCAATCATC
AACTTAAATGTCGTCTCATGGGGAACACGTGAGGTTGTTGCGAAAAAGACAAAGAAAGAA
CTCGAACAAGAAAAGAAAGAAGCCGAAGAAGCGGCAAAGAAAGCAAAACAAAAATCATTG
CTTGGATTTTTACAAGGCGGAGTTGGATCAAGTAATGATGAAGAAGGCTCAATCGATATT
TCAGTTGCGGGACTCTTTAGAATTTTATTGTGTACGCATGGAAAGACGAGTGATGAGAAA
GCGCAATTAATTCATATTGCTGACTCACTTGATACAATGAAGAAGAAAATTGAGTCAATT
GAACGACATATTGATCCACATGTTCATCATCCACATGGAAGAAGAAGAACAGCATCAACA
GGTTCAAAAGATCATCATTTAGGTTCTGTTGCTGAAGTGGCATCTGAAGAAGATAGTAGC
AGTTCTGAATCAGAATCAGAATCATCAACTGTTCCACGTAATGAAAGAGATTTCCTTACA
AATCCTTATTGGATTGAAGATCCAGATTTAAAGAAAGGAGAAGTAGATTTCCTATCAAGT
GCTGAAATTCAATTTTGGAAAGATATGATTGATAAATATCTTTTCCCTATTGATCAAGAT
AAAGCAGAACAGGCACGTATTGCAAAAGATTTGAAAGAATTGAGAAACTCTTCTGTCTTT
GGCTTTTTCATGATTAATGCCCTTTTTGTCCTTATTGTTTTCCTTTTGCAACTTAATAAG
GACAATTTACATGTAAAATGGCCCATTTCTGCCCGAATTAACGTCACTTATGACGAAATA
ACCCAAGAGGTGCATATCACAAAGGAATATTTGCAACTTGAACCTATCGGTTTGGTTTTT
GTGTTTTTCTTTGCATTGATTTTGGTTATTCAATTTACTGCCATGTTGTTCCATCGTTTT
GGAACTATTTCGCATATTTTGGCATCAACAGAGTTGAATCTTTCATGCAGCAAGAAATCA
GAGGAACTTTCTCAAGATGCATTAATTGATAAACATGCGGTAGAAATCGTCAAAAACTTA
CAACGACTACAGGGTATTGATGGTGACTACGATAATGATTCCGGTAGTGGACCAGATCGA
ATAGCACGTAGAAAAACTATACAAAATCTAGAGAAGGCGCGACAGCCACGCCGACAAATT
GGTACACTCGATGTGGCCTTCAAAAAGCGTTTCCTTAAATTGACGGCTGCTAATGAGGAG
AACAACTTAGGAACGCCTATTTTAACACGTCGTATGACCATGAGAGCTGAAACGATCCGT
GCATTGGAAGTCAGAAAAAATTCAGTTATGGCAGAAAAGAGAAAGTCACAAATGCAGACT
TTAGGTGCAAATAATGAATATGGAATAACTGGAAATCATAATAATAATCATCAACTACCT
AGTAGACCAGTTCGTAGCTCAAATGCTGGCATTAATGTTAAAGAATTGTTTAATGTCAAT
GGCAGTGCAAATCATAATATTTACGGTACCAACACAGGTGCAGTAAATCAAGCATATGAG
CATGTGGAAGAAGAAGATGGAAATTCAATTAGACTTACACCACGTAATCAAACATCATCA
TGGGCTAGCAACTCAACGAGCACCCAACGACTTTAG

>g10236.t2 Gene=g10236 Length=1591
MSAIRHRPLQAMPGAGGESDENFSDDESTPLTHDIYGGSQRTVHETKGWDVFRDPPIKVD
SGSMANQACMEITAKILKLVAYIITFILVLCGGVIAKGCVIFMSAQLKRDRKIQYCNKDL
ARDKQFIAIIPEEERIAWMWALMIAFAVPEIGALIRSVRICFFKSWKLPQKSHFLFIFLM
ESFHTIGLVLLVFVVLPELDSVKGAMLTNCLCVVPGILGLLSCTSKEGKRAAKIIMDLAA
IAAQVTGFVVWPLLEDRPVLWMIPASAFMISCGWWENYVSSQSPFGIVRALGRVKEDLKY
TRYFAYMFLSIWKIVAFVFTVIMILWFEGDDPTSIFGLFSKGFGPHKIVVEELTTTFGKS
LPDLIDSSQIGDIVQIDASHNTVIHVLIIQIIAAYICYIFGKFACKILIQGFSYAFPVNL
TIPISISLLIAACGIRNGDPCFYHGSIPDYLFFESPPVFKLSDLASKQMAWAWLLWLFSQ
FWITLHVWTPKCERLATTEKLFVTPMYNALLIDQSMALNRRRDDQADVKTEDLAEIEKEK
GDEYYETISVHTDGSAMPKSNVKSSDHITRIYACATMWHETKDEMIEFLKSIMRLDEDQC
ARRVAQKYLRIVDPDYYEFETHIFFDDAFEISDHSDDDIQVNRFVKLLVSTIDEAASDVH
QTNIRLRAPKKYPAPYGGRLVWTLPGKTKMIAHLKDKDRIRHRKRWSQVMYMYYLLGHRL
MELPISVDRKDVIAENTYLLTLDGDIDFQPNAVTLLIDLMKKNKNLGAACGRIHPVGSGP
MVWYQKFEYAIGHWLQKATEHMIGCVLCSPGCFSLFRGKALMDDNVMKKYTTRSDEARHY
VQYDQGEDRWLCTLLLQRGYRVEYSAASDAYTHCPEGFNEFYNQRRRWVPSTIANIMDLL
VDYKRTIKVNDNISMLYIFYQMLLMGGTILGPGTIFLMLVGAFVAAFRIDNWTSFHYNIV
PILLFMFVCFTCKSNIQLLLAQILSTMYALIMMAVIVGTALQLGEDGVGSPSAIFLMSMV
GSFFIAACLHPQEFWCIAAGIIYLLSIPSMYLLLILYSIINLNVVSWGTREVVAKKTKKE
LEQEKKEAEEAAKKAKQKSLLGFLQGGVGSSNDEEGSIDISVAGLFRILLCTHGKTSDEK
AQLIHIADSLDTMKKKIESIERHIDPHVHHPHGRRRTASTGSKDHHLGSVAEVASEEDSS
SSESESESSTVPRNERDFLTNPYWIEDPDLKKGEVDFLSSAEIQFWKDMIDKYLFPIDQD
KAEQARIAKDLKELRNSSVFGFFMINALFVLIVFLLQLNKDNLHVKWPISARINVTYDEI
TQEVHITKEYLQLEPIGLVFVFFFALILVIQFTAMLFHRFGTISHILASTELNLSCSKKS
EELSQDALIDKHAVEIVKNLQRLQGIDGDYDNDSGSGPDRIARRKTIQNLEKARQPRRQI
GTLDVAFKKRFLKLTAANEENNLGTPILTRRMTMRAETIRALEVRKNSVMAEKRKSQMQT
LGANNEYGITGNHNNNHQLPSRPVRSSNAGINVKELFNVNGSANHNIYGTNTGAVNQAYE
HVEEEDGNSIRLTPRNQTSSWASNSTSTQRL

Protein features from InterProScan

Transcript Database ID Name Start End E.value
43 g10236.t2 CDD cd04190 Chitin_synth_C 574 895 4.9876E-92
7 g10236.t2 Coils Coil Coil 1071 1101 -
6 g10236.t2 Coils Coil Coil 1257 1277 -
5 g10236.t2 Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 732 880 1.2E-6
59 g10236.t2 MobiDBLite mobidb-lite consensus disorder prediction 1162 1213 -
61 g10236.t2 MobiDBLite mobidb-lite consensus disorder prediction 1562 1591 -
60 g10236.t2 MobiDBLite mobidb-lite consensus disorder prediction 1571 1591 -
2 g10236.t2 PANTHER PTHR22914:SF42 CHITIN SYNTHASE 1 45 1436 0.0
3 g10236.t2 PANTHER PTHR22914 CHITIN SYNTHASE 45 1436 0.0
1 g10236.t2 Pfam PF03142 Chitin synthase 737 940 1.6E-25
12 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 78 -
27 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 79 103 -
21 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 104 135 -
32 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 136 155 -
13 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 156 174 -
34 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 175 196 -
22 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 197 201 -
35 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 202 222 -
10 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 223 233 -
37 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 234 254 -
18 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 255 259 -
29 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 260 279 -
16 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 280 302 -
28 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 303 327 -
23 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 328 381 -
33 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 382 400 -
14 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 401 411 -
26 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 412 432 -
20 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 433 469 -
42 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 470 488 -
9 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 489 922 -
41 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 923 949 -
25 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 950 954 -
31 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 955 972 -
15 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 973 978 -
30 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 979 1001 -
17 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1002 1012 -
39 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 1013 1029 -
11 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1030 1040 -
38 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 1041 1060 -
24 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1061 1278 -
36 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 1279 1298 -
8 g10236.t2 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1299 1335 -
40 g10236.t2 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 1336 1357 -
19 g10236.t2 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1358 1591 -
4 g10236.t2 SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases 735 925 3.09E-17
55 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 79 101 -
48 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 138 160 -
46 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 173 195 -
50 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 205 224 -
51 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 305 327 -
49 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 382 404 -
58 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 411 433 -
53 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 469 488 -
47 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 915 937 -
45 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 952 971 -
56 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 978 997 -
52 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 1007 1029 -
54 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 1034 1056 -
57 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 1279 1296 -
44 g10236.t2 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 1336 1358 -

Transmembrane regions from TMHMM

Disordered region

IUPRED3 score over 0.5 is predictive of a disordered region.

GO terms from InterProScan

GOID TERM ONTOLOGY
GO:0004100 chitin synthase activity MF
GO:0016758 hexosyltransferase activity MF

KEGG

Orthology

Pathway

  • This transcript belongs to the following pathways

Expression

Transcript expression in Pv11 cells

TPM values are indicated as average +/- STDEV.

Differential expression

Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed