General information for g10549.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Protein lev-9.
Parent gene
- The parent gene g10549 is located on chr_1: 10444569..10450606 (+ strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_1 | g10549 | g10549.t1 | TSS | g10549.t1 | 10439345 | 10439345 |
| chr_1 | g10549 | g10549.t1 | isoform | g10549.t1 | 10439529 | 10444729 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon1 | 10439529 | 10439586 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS1 | 10439529 | 10439586 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon2 | 10439812 | 10439931 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS2 | 10439812 | 10439931 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon3 | 10439992 | 10440183 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS3 | 10439992 | 10440183 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon4 | 10440243 | 10440577 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS4 | 10440243 | 10440577 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon5 | 10440644 | 10440677 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS5 | 10440644 | 10440677 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon6 | 10440740 | 10440868 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS6 | 10440740 | 10440868 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon7 | 10441317 | 10441708 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS7 | 10441317 | 10441708 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon8 | 10441784 | 10442195 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS8 | 10441784 | 10442195 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon9 | 10442264 | 10442418 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS9 | 10442264 | 10442418 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon10 | 10442486 | 10443832 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS10 | 10442486 | 10443832 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon11 | 10443909 | 10443966 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS11 | 10443909 | 10443966 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon12 | 10444026 | 10444379 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS12 | 10444026 | 10444379 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon13 | 10444463 | 10444501 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS13 | 10444463 | 10444501 |
| chr_1 | g10549 | g10549.t1 | exon | g10549.t1.exon14 | 10444569 | 10444729 |
| chr_1 | g10549 | g10549.t1 | cds | g10549.t1.CDS14 | 10444569 | 10444729 |
| chr_1 | g10549 | g10549.t1 | TTS | g10549.t1 | NA | NA |
Sequences
>g10549.t1 Gene=g10549 Length=3786
ATGAAAAATTTTCAACTTTTCTGGATCATCTTAGTTTCAGCCATTTTTTTTCAACGAGGC
TATTCAGGACCAACGACAGTAACAGAGGATCCAGATGATTGGGAAGAAGAAGATGATTCT
TCTGAAGCTGATGATGATGGTCGTGTTTATAAAAATCCTAGAAATTTTCCATCACCTGAC
TGTCCTAGAGACGAAGAACAAGCAACCCTCTTAGGGCAAAAGTGTCTAAGAAAATGTTCA
TCAGATGAAGATTGTAAAAGTAAGAAAAAGAAATGCTTATGTGACGGTGCTTGTGGAATG
TCATGTATCAAACCAGATAGAGAATGTCCTGAACTTGAACATCCAGCATTAGGCACTGTA
GTAATGTCAGGACGAACTTTTGGTTCGAGAGCGAGCTATACTTGTAATCACGGTTATCAT
GTCGTGGGATTGCAAACAAGAGTTTGTCAAGCTTATGGCTCCTGGTCTGGCAGTGAGCCA
GCATGCAAGCAAAATATTTATTGCTTAGCACCACCAACAATCGAGCATGCACGACATTCC
GCACTACCAGAACAAGCAACATTTGATTTAGATTCAACGGTTCAGTATCATTGCCATTTG
GGCTATGCAACCGCGGGTTTCCCTCGAGCTAAATGCTTAGCAATCGATGGACAAGCAAGC
TGGTATGGTCCTGATATTTCCTGTGAACCACGTTCATGTGGACAACCAGTCGATCCAGCG
AACTCAGGATGGCATGCGGGCGAATGCTATACATATGGATGTCGGATAACATATCATTGT
GGAGAAGGCTATGAATTAGTTGGAAAACAAGCTGCAGATTGTCAAGCAGATGGAGTTTGG
GCACCAAAAGAAGTTCCAACTTGTGTTTTGGTAACAGCAGTTCAATGTCCTCAACCGGAT
AATCCACGAAATGGAAAAGCTATTTATACGAGTGTTTCATATAACTCTGTTGTTAGTTAT
GAATGTCGTTATGGTTATACATTGATTGGAGAAAGTTCGAGGCGTTGTGGTGCTGATAAA
AAATGGTCTGGTAGCTTGCCACAATGCAAAGAAATTAATTGCGGTCATCCAGGAACTTTA
TATAATGGTTGGCTAGAGAATGTTGAAGCAGGTTTCGGTTTAGGCTCAAGTATAATTTTC
CGATGTCAGCCAGAGATGTTACTTGTCGGCAATGCATCAACTGTTTGTCAAATAGATGGA
AGATGGAGATATCCATTACCTCAATGTCTTGCACCATGTGTTGTACCAAGTATTTCTCAA
GGAATTGTTGTTCCAATTGAAGTTGATATTCCTGATACAAATGCAACTCAAGCAACACCG
ATAGGAATGGGCATTGGAAGCAGCAAAGTTAGGCATGGAACAATTTTAGAAGTAATTTGC
GATGAACATTATGAATTTCCATTAACATCACTTTCACCTCCAACATGTAATAATGGTACA
TGGTCAACTATACCACGATGTGTGCCTGCAAGATGCAAAACACTCCCAAAAGCACCAAAA
TTTGCTATGGTGATTTCACCAAAGACAGAACATGGCATGAAAGCACGATTTAAATGCAAA
GATGGTTGGCAACTTGCAACTGCAGATGGTAAACCAATAAACGATTCAAATGAACATGTA
TTAACATGCTTATTTGGCAATTGGAGTGGAGAATATCCAATTTGTCAAGAGGTTTATTGT
CAGTTTCTTGGTATCATTCCAAATGGGAAAGTATTATTAGTTGGAAACATGGGTCTTTAT
GATTATCGTCCTTATGTCAAAAAAGTCATAAATAATAAACAAATAATGTATGATTGTGAT
AAGGGCTATGTTCTTGAGAATGGTGCTTCAGGTGCAACTTGTATTGGTGGAAAATGGCAG
CCATCACAACTTCCTGATTGTCTTTTAGGACAACATCCTCGATTGAGATGGACAAGAAAG
AAGAGATCGGTTGATTTAAAATTTACACGTGCCAAATTTATGCTCAATCATTATCGAAAT
ATCAAACGAAAGCACTTTGACCATCATAAAATTGATGAATTTATTAAAAAAGCTGCCGCA
AGAGAGAAAAGAAGTATCATAAATGAAAGTCAAAAACATTTTCTCGAATATCTCAATAAT
ATTGTTCAAAATGAATCAAGAGAGAAGAAAAAACGAGAAAATCGCGATTTTTCTGAGATT
GATAGAGCATATTCAAAATATTATGAGAAAATTAAAGCAAGATATAGAAATTATGTAAAG
AATCTCTTTCCTAATCAAAAGCAAAAAAATTCATTAATCAACAATAGCTATCCAATGCAA
CCTGTTGCAGAAGAGGAAGTGAAAAATACAAGAAAAATTCAAGATGGTCGATGGTTCAAT
GCACCAGAATTTCGATATCGTGCAATACAAAAAGCAAGATCATCTTACACAAAAGATTTA
CAAAATGAAGAAATAGATGCTGATTTAGATGATCAACCAGTTGCAATTCCAACAATTAAT
GATTCAACACGATCAAACAAATATGAGACATCTATAATAAATACAAATGCAAGCATATCA
AATTATTATCCTTCTTATAATGAAAAACAACAACAAATAGAAGAAAATAATGAGAATGGT
GCAAAAAAGCACAGCAGCTCAGTTGATATTGCTGCCAATATTTATGCACAATTACAATCG
CAAATAGTGAGGCGAAAACGTGATACAGATGATGATGGAAAAGATGATGATATTGGTGTA
GTTGGAAAGAAAAAACGTGGACCATGTGAGCCGATAACTGAGCTTGATCATATGCAAATG
GAAATTGTTAAACCTCCAAAAAATCCTAATGATAGTTTTGGTCATGGAATGGTATTGAAA
ATAACGTGCAATAGTGGCTATCATTCAAATATCCAAACAGTCAATTCGACTGTTCGATGT
AATAAAGGTGTTTGGAAGCCAGTTAAACCAGTATGCACAGTAACAAAAGGTCCTTGCTTT
GTACCGTCTGTTGAACATGGAAGTTATTATGAAATGCCATCATCAGATCCGCTAATTGAA
CAAATTAAACCAACAACTAGTCCACTTACACCACTTGCTAGAGTCGATAATGGTATAACA
ATTGCATTTCAATGTGACACTGGCTACAATATTCAAGGATCAAATAGTATCAAATGTATT
GATGGAAATTGGTCAAGTCAAGCATCTCCTGAATGTCTTCCTGCTCCTTGTGTGTTGCCT
GAAATCTTACATGCTGTATATCAAGGCGGTTATCGATTGGGTTTAACTATAGCTCATGGA
TCTCATGTTATGGTAGTTTGTGAAAATGGAGCAGCTAATACGATTCCACCAGTTCAAATG
GATTGTGCACTAGGATTATTGACTCCAACAACAGTCAGTTGTAGTTTCACGGCTTCGCGT
AAATCAAGGGATGATGAAATGAATAGTTTTATTGTTGATGACGGTAATGTAACGACATCT
TCTGAGGAAGGTGGCGATTTTTGTGGACCACCATCAAAAGATCAGGCAATGTTAATTTAT
AAAAATGAAGATACTGAAATAGATGATACTTATCCTGCTGGTACTGAAATTTCCTTCAGT
TGCATTCCAAGTATTACTGGAGAGCGAACAACTTGGAAAATTGTGTGTGAGAATGGTCAT
TGGATCGGAAGAGCACACGATTGTGAGGATGACGAAAGACTTTATAATACACCATTAGCA
AATGGATCTTGTGTCTTTAAAAATACAGATCCACATGTGGCAAATTTCTATAATGACTTA
GAAATAAGAGAAAGTTATGTCGAATTTCCTGCTGGAACAACGCTAATCTCAAGGTACCAT
ATCTGA
>g10549.t1 Gene=g10549 Length=1261
MKNFQLFWIILVSAIFFQRGYSGPTTVTEDPDDWEEEDDSSEADDDGRVYKNPRNFPSPD
CPRDEEQATLLGQKCLRKCSSDEDCKSKKKKCLCDGACGMSCIKPDRECPELEHPALGTV
VMSGRTFGSRASYTCNHGYHVVGLQTRVCQAYGSWSGSEPACKQNIYCLAPPTIEHARHS
ALPEQATFDLDSTVQYHCHLGYATAGFPRAKCLAIDGQASWYGPDISCEPRSCGQPVDPA
NSGWHAGECYTYGCRITYHCGEGYELVGKQAADCQADGVWAPKEVPTCVLVTAVQCPQPD
NPRNGKAIYTSVSYNSVVSYECRYGYTLIGESSRRCGADKKWSGSLPQCKEINCGHPGTL
YNGWLENVEAGFGLGSSIIFRCQPEMLLVGNASTVCQIDGRWRYPLPQCLAPCVVPSISQ
GIVVPIEVDIPDTNATQATPIGMGIGSSKVRHGTILEVICDEHYEFPLTSLSPPTCNNGT
WSTIPRCVPARCKTLPKAPKFAMVISPKTEHGMKARFKCKDGWQLATADGKPINDSNEHV
LTCLFGNWSGEYPICQEVYCQFLGIIPNGKVLLVGNMGLYDYRPYVKKVINNKQIMYDCD
KGYVLENGASGATCIGGKWQPSQLPDCLLGQHPRLRWTRKKRSVDLKFTRAKFMLNHYRN
IKRKHFDHHKIDEFIKKAAAREKRSIINESQKHFLEYLNNIVQNESREKKKRENRDFSEI
DRAYSKYYEKIKARYRNYVKNLFPNQKQKNSLINNSYPMQPVAEEEVKNTRKIQDGRWFN
APEFRYRAIQKARSSYTKDLQNEEIDADLDDQPVAIPTINDSTRSNKYETSIINTNASIS
NYYPSYNEKQQQIEENNENGAKKHSSSVDIAANIYAQLQSQIVRRKRDTDDDGKDDDIGV
VGKKKRGPCEPITELDHMQMEIVKPPKNPNDSFGHGMVLKITCNSGYHSNIQTVNSTVRC
NKGVWKPVKPVCTVTKGPCFVPSVEHGSYYEMPSSDPLIEQIKPTTSPLTPLARVDNGIT
IAFQCDTGYNIQGSNSIKCIDGNWSSQASPECLPAPCVLPEILHAVYQGGYRLGLTIAHG
SHVMVVCENGAANTIPPVQMDCALGLLTPTTVSCSFTASRKSRDDEMNSFIVDDGNVTTS
SEEGGDFCGPPSKDQAMLIYKNEDTEIDDTYPAGTEISFSCIPSITGERTTWKIVCENGH
WIGRAHDCEDDERLYNTPLANGSCVFKNTDPHVANFYNDLEIRESYVEFPAGTTLISRYH
I
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 46 | g10549.t1 | CDD | cd00033 | CCP | 109 | 163 | 1.12805E-11 |
| 52 | g10549.t1 | CDD | cd00033 | CCP | 168 | 229 | 6.77166E-6 |
| 51 | g10549.t1 | CDD | cd00033 | CCP | 233 | 289 | 1.30948E-7 |
| 49 | g10549.t1 | CDD | cd00033 | CCP | 296 | 350 | 1.57703E-13 |
| 48 | g10549.t1 | CDD | cd00033 | CCP | 354 | 409 | 4.58683E-9 |
| 50 | g10549.t1 | CDD | cd00033 | CCP | 909 | 972 | 0.00853269 |
| 47 | g10549.t1 | CDD | cd00033 | CCP | 1018 | 1052 | 5.39335E-4 |
| 38 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 104 | 166 | 3.7E-14 |
| 34 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 167 | 227 | 1.3E-10 |
| 39 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 228 | 290 | 1.8E-12 |
| 37 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 291 | 350 | 9.3E-18 |
| 32 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 351 | 414 | 4.8E-12 |
| 33 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 429 | 488 | 6.2E-5 |
| 36 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 490 | 560 | 5.8E-7 |
| 40 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 561 | 628 | 1.6E-8 |
| 35 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 907 | 972 | 2.5E-7 |
| 31 | g10549.t1 | Gene3D | G3DSA:2.10.70.10 | Complement Module | 977 | 1053 | 1.1E-10 |
| 66 | g10549.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 62 | - |
| 65 | g10549.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 43 | - |
| 10 | g10549.t1 | PANTHER | PTHR19325 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING | 25 | 338 | 0.0 |
| 15 | g10549.t1 | PANTHER | PTHR19325:SF531 | HIG-ANCHORING SCAFFOLD PROTEIN, ISOFORM G | 25 | 338 | 0.0 |
| 12 | g10549.t1 | PANTHER | PTHR19325 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING | 336 | 416 | 0.0 |
| 17 | g10549.t1 | PANTHER | PTHR19325:SF531 | HIG-ANCHORING SCAFFOLD PROTEIN, ISOFORM G | 336 | 416 | 0.0 |
| 14 | g10549.t1 | PANTHER | PTHR19325 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING | 412 | 1013 | 0.0 |
| 19 | g10549.t1 | PANTHER | PTHR19325:SF531 | HIG-ANCHORING SCAFFOLD PROTEIN, ISOFORM G | 412 | 1013 | 0.0 |
| 11 | g10549.t1 | PANTHER | PTHR19325 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING | 1017 | 1068 | 0.0 |
| 16 | g10549.t1 | PANTHER | PTHR19325:SF531 | HIG-ANCHORING SCAFFOLD PROTEIN, ISOFORM G | 1017 | 1068 | 0.0 |
| 13 | g10549.t1 | PANTHER | PTHR19325 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING | 1125 | 1217 | 0.0 |
| 18 | g10549.t1 | PANTHER | PTHR19325:SF531 | HIG-ANCHORING SCAFFOLD PROTEIN, ISOFORM G | 1125 | 1217 | 0.0 |
| 1 | g10549.t1 | Pfam | PF00095 | WAP-type (Whey Acidic Protein) ‘four-disulfide core’ | 60 | 105 | 9.5E-5 |
| 5 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 109 | 162 | 4.6E-9 |
| 6 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 168 | 225 | 4.1E-4 |
| 2 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 233 | 288 | 1.7E-8 |
| 9 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 296 | 349 | 1.4E-9 |
| 3 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 354 | 409 | 8.9E-7 |
| 7 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 592 | 627 | 4.9E-4 |
| 4 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 909 | 972 | 8.8E-4 |
| 8 | g10549.t1 | Pfam | PF00084 | Sushi repeat (SCR repeat) | 1020 | 1052 | 7.5E-6 |
| 42 | g10549.t1 | Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 22 | - |
| 43 | g10549.t1 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 5 | - |
| 44 | g10549.t1 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 6 | 17 | - |
| 45 | g10549.t1 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 18 | 22 | - |
| 41 | g10549.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 23 | 1261 | - |
| 67 | g10549.t1 | ProSiteProfiles | PS51390 | WAP-type ‘four-disulfide core’ domain profile. | 53 | 106 | 12.712 |
| 72 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 100 | 164 | 11.358 |
| 68 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 166 | 230 | 8.779 |
| 78 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 231 | 290 | 10.737 |
| 71 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 294 | 351 | 11.503 |
| 75 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 352 | 411 | 10.095 |
| 73 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 426 | 489 | 6.034 |
| 77 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 490 | 557 | 8.282 |
| 70 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 558 | 629 | 7.443 |
| 74 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 907 | 974 | 8.044 |
| 76 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 977 | 1054 | 8.707 |
| 69 | g10549.t1 | ProSiteProfiles | PS50923 | Sushi/CCP/SCR domain profile. | 1146 | 1210 | 7.795 |
| 60 | g10549.t1 | SMART | SM00032 | CCP_2 | 109 | 162 | 3.5E-11 |
| 54 | g10549.t1 | SMART | SM00032 | CCP_2 | 168 | 228 | 8.2E-7 |
| 53 | g10549.t1 | SMART | SM00032 | CCP_2 | 233 | 288 | 1.5E-6 |
| 63 | g10549.t1 | SMART | SM00032 | CCP_2 | 296 | 349 | 4.5E-16 |
| 55 | g10549.t1 | SMART | SM00032 | CCP_2 | 354 | 409 | 4.1E-9 |
| 57 | g10549.t1 | SMART | SM00032 | CCP_2 | 430 | 487 | 9.4 |
| 64 | g10549.t1 | SMART | SM00032 | CCP_2 | 492 | 555 | 5.6E-5 |
| 59 | g10549.t1 | SMART | SM00032 | CCP_2 | 560 | 627 | 0.5 |
| 56 | g10549.t1 | SMART | SM00032 | CCP_2 | 909 | 972 | 1.2E-4 |
| 61 | g10549.t1 | SMART | SM00032 | CCP_2 | 992 | 1052 | 7.4E-5 |
| 58 | g10549.t1 | SMART | SM00032 | CCP_2 | 1057 | 1114 | 5.0 |
| 62 | g10549.t1 | SMART | SM00032 | CCP_2 | 1148 | 1208 | 1.0 |
| 21 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 109 | 163 | 2.97E-13 |
| 25 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 166 | 241 | 2.29E-10 |
| 23 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 228 | 291 | 1.75E-11 |
| 22 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 294 | 363 | 1.39E-18 |
| 20 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 346 | 410 | 5.26E-13 |
| 29 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 448 | 495 | 6.34E-6 |
| 27 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 495 | 569 | 6.21E-8 |
| 24 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 552 | 627 | 2.83E-8 |
| 26 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 909 | 974 | 2.16E-5 |
| 28 | g10549.t1 | SUPERFAMILY | SSF57535 | Complement control module/SCR domain | 1017 | 1061 | 3.67E-7 |
| 30 | g10549.t1 | SignalP_EUK | SignalP-noTM | SignalP-noTM | 1 | 22 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0005576 | extracellular region | CC |
| GO:0030414 | peptidase inhibitor activity | MF |
KEGG
Orthology
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
