Gene loci information

Transcript annotation

  • This transcript has been annotated as Dynein heavy chain, cytoplasmic.

Parent gene

Gene structure

  • The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.

Chromosome Gene Transcript Category ID Start End
chr_3 g1059 g1059.t3 TSS g1059.t3 7902016 7902016
chr_3 g1059 g1059.t3 isoform g1059.t3 7902120 7913484
chr_3 g1059 g1059.t3 exon g1059.t3.exon1 7902120 7902366
chr_3 g1059 g1059.t3 cds g1059.t3.CDS1 7902120 7902366
chr_3 g1059 g1059.t3 exon g1059.t3.exon2 7902623 7904011
chr_3 g1059 g1059.t3 cds g1059.t3.CDS2 7902623 7904011
chr_3 g1059 g1059.t3 exon g1059.t3.exon3 7904069 7904585
chr_3 g1059 g1059.t3 cds g1059.t3.CDS3 7904069 7904585
chr_3 g1059 g1059.t3 exon g1059.t3.exon4 7904640 7904850
chr_3 g1059 g1059.t3 cds g1059.t3.CDS4 7904640 7904850
chr_3 g1059 g1059.t3 exon g1059.t3.exon5 7905192 7905650
chr_3 g1059 g1059.t3 cds g1059.t3.CDS5 7905192 7905650
chr_3 g1059 g1059.t3 exon g1059.t3.exon6 7905714 7908577
chr_3 g1059 g1059.t3 cds g1059.t3.CDS6 7905714 7908577
chr_3 g1059 g1059.t3 exon g1059.t3.exon7 7908634 7908941
chr_3 g1059 g1059.t3 cds g1059.t3.CDS7 7908634 7908941
chr_3 g1059 g1059.t3 exon g1059.t3.exon8 7909001 7909581
chr_3 g1059 g1059.t3 cds g1059.t3.CDS8 7909001 7909581
chr_3 g1059 g1059.t3 exon g1059.t3.exon9 7909782 7910017
chr_3 g1059 g1059.t3 cds g1059.t3.CDS9 7909782 7910017
chr_3 g1059 g1059.t3 exon g1059.t3.exon10 7910083 7911437
chr_3 g1059 g1059.t3 cds g1059.t3.CDS10 7910083 7911437
chr_3 g1059 g1059.t3 exon g1059.t3.exon11 7911493 7912219
chr_3 g1059 g1059.t3 cds g1059.t3.CDS11 7911493 7912219
chr_3 g1059 g1059.t3 exon g1059.t3.exon12 7912278 7913227
chr_3 g1059 g1059.t3 cds g1059.t3.CDS12 7912278 7913227
chr_3 g1059 g1059.t3 exon g1059.t3.exon13 7913285 7913484
chr_3 g1059 g1059.t3 cds g1059.t3.CDS13 7913285 7913484
chr_3 g1059 g1059.t3 TTS g1059.t3 NA NA

Sequences

>g1059.t3 Gene=g1059 Length=10044
ATGGGAGATTCTTTGGAAAACATCGATCAACCGATTGAAAGTCAGCAGAATGTATCAATC
GTTGATCAAAAAGCATTTAACAACTATTTGCGAAAATGTGTTAATCTTTTCTTTGATGAC
GAGGAATTTAATTCTACAAAGTTAGAAGAAGCTCTAGATGAGAATAGAGCTAATCAAGAA
TGCATTAAAAAGTTTCTTTCTGATCCTCAAGTGCAAACTCTATACATCCAGAAGTCTTCT
AGTAAGGATGATGAAGGCGATCAAGCTCAAGAGGGTGAAGAAGAAAAAGAATCTTCTCAA
TATTACATCAGCAATGAGGTTCATTTTACTAATCCTCGTTATCAATCACTTGTTTGTGTA
AAGAGAGGAACTGTAATTGAAGCTGACAAGTCTATTCATTCGCAATTGAGACTCATTAAT
TTCTCGGAGGGATCGCCTTATGAAACGCTTCATTCGTACATAAGCAAAACACTTGCACCA
TACTTCAAGAGCTATGTCAAAGAATCAGGTAGAGCAGATCGAGATGGAGATAAAATGGCA
CCTTCTGTCGAAAAGAAATTGGCTGAGTTAGAAATGGGCTTACTCCATCTTCAACAAAAT
ATTGACATTCCTGAAATAACTTTACCAATTCATCCAACTGTTCAGTCTATCATTAAACGC
TGTGCTGATGAAGGACGTAAAGCGAAAGTTGGCGATTTTGGAGATAGAGTTGATGATTCT
TCTTTTTTAAATCAACTGCAGAATGGTGTGAATCGTTGGATTAAAGAAATTCAAAAAGTC
ACCAAACTTGATCGTGATCCATCATCTGGAACTGCATTGCAAGAAGTTTCATTCTGGCTC
AATCTCGAGCGTGCTCTTTATCGTATTCAAGAGAAACGTGAATCTTTGGAAGTTGCATTA
ACTCTGGATATCTTAAAACATGGCAAAAGATTTCAAGCTACTGTCGCTTTCGATACTGAT
ACTGGACTTAAGCAAGCACTTTCAATGGTCGCCGATTATAATCCGCTAATGAAAGATTTT
CCTATCAATGACTTGCTTTCTGCTACTGAATTGGATCGCATTCGTTCTGCTGTTCAATTA
ATTTTCTCTCATTTGAGGAAAATTCGTAACACTAAATATCCGATTCAACGAGCTTTGCGA
TTGATTGAAGCAATTTCTCGTGATTTGAGTCAACAATTGTTGAAAGTTCTTGGCACTCGT
CGTTTAATGCATATTCCATTTGATGAATTTGAACGTGTGATGAATCAATGTTTCGAAATA
TTTTGCTGCTGGGATGATGAATATGAGAAATTGCAAGGATTGTTGAGAGATATCGTTAAG
AAGAAGCGTGATGAGCATTTAAAAATGGTTTGGCGAGTAAATCCAGCTCATAAGAAGCTT
CAACAAAGAATGGAACATATGCGTAAATTCAGACGTCAGCATGAACAATTGCGCACTGTT
ATTGTGAGAGTTTTAAGACCAACTCGTCAACAATCAAATCAGCCAGCTGATATACCAATC
GATTCTAAACCATCATTAGAAGCAGCTGATGCAAATGCAATTGAAGAAGTTAATTTGGCT
TATGAGAATGTTAAGGAAGTTGAATGTTTGGACATTTCTAAAGAAGGCTCTGAAGCTTAT
GATGCTGCTGTTAAACGCTATGAAGAGCGTATTGATAGAGTTGAAGCAAGAATTACTGCA
CATTTGCGTGATCAACTTGGAACAGCAAAGAATGCCAACGAAATGTTTAGAATTTTTTCT
CGATTCAATGCTCTATTTGTTCGTCCTCATATTCGTGGTGCAATTCGAGAATATCAAACA
CAATTAATTCAGCGTGTAAAAGATGATATAGAAGGACTTCATGAGAAATTCAAGGTTCAA
TATCCACAAAGTAAAAGTTGTCGATTGTCAGTCGTTCGCGATTTGCCACCTGTTGCTGGC
TCAATAATATGGGCAAGACAAATTGATAATCAATTGACAATGTACTTGAAACGTGTTGAG
GATGTTTTGGGAAAAGGCTGGGAATCGCATATTGATGGTCAGAAACTGAAAAATGATGGA
GATAGTTTCCGTGCAAAATTATCAACTAACGAATTGTTCATGGATTGGGCAAGAAAAGTC
CAAGAAAGAAATCTTGGGATTACTGGTCGTATTTTCTTGATTGAAACTGCAAGATCCCGC
ACACGAAGTGGAAATACTTTGAAGCTCAAAGTAAATTTTCTTCCTGAAATCATTACTCTT
TACAAGGAAGTTAGAAATTTAAAGAGCTTAGGCTTTCGTGTTCCATTGGCAATTGTTAAT
AAGGCGCATCAAGCTAATCAAATTTATCCATTTGCTATTTCATTGATTGAATCCAATCGC
ACTTATGAAAGAACTTTAGATAAGATTGAAGATCGTGCAAGTATTGTTCCATTAGTTGCA
CAATTGCGCAAGGATGTTCTTAATTTGGTGTCTGAAGGAATTGCTCTTGTATGGGAAAGC
TACAAACTTGACACTTATGTACAACGTTTATCTGAAGCAGTAACTCAATTTCAAGAAAAA
GTTGAAGATCTTTTGGTTGTTGAAGAGCAATTGGATGTTGATATTCGTTCTTTGGAAACA
TGTCCTTATAGTGCTGCGACATTTGCTGATATTTTGTCAAAGATTCAACATGCTGTCGAT
GATTTGTCATTGCGTCAATATTCAAATTTGCATGTTTGGGTTCAACGTTTGGATGAAGAA
GTTGAAAAGAAACTAGCTGCTCGCTTGCAAGCTGGTATTCAAGCATGGACAGATGCATTG
ACTGGAAATAAGAAAGATGTTGATTTATCAATGGACACTGATGCACCAGTGCAACCAACA
ATTAAACCTGGCGGTGATCCACAAATTCAAAATGCGATCCATGAAATCAGAATCACAAAT
CAACAAATGTATCTCTTCCCTTCGATCGAAGAAGCTCGATTCCAAATTATGCAACAGCTA
TTTGCTTGGCAAGCAATTGTTACATCACAAACTCGTTTGCAAAGTTCTCGCTATCAAGTT
GGTTTGGATAAGCCAGTATCGCAGACTTATAGAAATTTGTTGACGAAATTGCCGGGTGGT
TCTGAACCATTGGAGGCTGGATATGCAGCAATTGATAGCAAAATGTCTGAAATTCGTGCA
TATGTTGATGAATGGCTTCGTTATCAGTCATTGTGGGACTTGCAACCTGATGTTCTTTAT
GGTCGTTTAGGTGAAGACATTAATTTGTGGATTAAGTGCTTGAATGATATCAAGAAATCA
AGAACAACTTTCGATACAAGCGATACACGTCGTGCTTATGGACCAATTATCATTGACTAT
GCAAAAGTTCAAGCTAAAGTTACATTGAAATACGATTCATGGCATAAAGAAGCATTGAGC
AAATTTGGACAACTTTTGAGTAATGAAATGAGTACTTTCCATACTAAAGTTTCAAAATCT
CGTACTGATTTAGAGCAGCAATCGATTGAGGCAGCAAGTACATCTGATGCTGTAACTTTC
ATTACTTATGTTCAATCGCTGAAGAAAGAAATGCTTGTATGGGATAAACAGGTTGAAGTT
TATCGTGAAGCTCAAAGAATTTTAGAACGTCAGAGATTCCAGTTTCCAAATAATTGGCTT
CATGTTGATAATATCGAAGGAGAATGGTCAGCATTCAATGAAATTATGAAACGCAAAGAT
TCTGCTATTCAAACACAAGTTGCAAGTCTTCAATCAAAAATTGTTGCTGAAGATAAAGCT
GTTGAGACAAGAACAGTTGAATTCCTCAATGATTGGGAAAAGAACAAACCAACAGCTGGT
CGAACTCGTCCTGATGAAGCTCTTCAACAATTGCAAATTTTCGAGACAAAATTCTCTCGA
TTGAAGGAGGAACGAGATAATGTTGCAAAAGCAAAGGAAGCACTTGAACTTCAAGAGTCC
GCTATTCCAAATAATAGCTCTGAGCGCATGAGTGTTGTTTTAGAAGAATTGCAAGATTTG
AGAGGTGTATGGAGTGAATTGGCAAAGATTTGGCAACAAATTGATGAAACTCGTGAAAAG
CCTTGGTTATCTGTTCAACCTCGTAAATTGCGTCAAAGCTTGGAAGCTATGATGAGTCAA
TTGAAAGAATTGCCAGCACGTTTGCGAATGTATGAATCATTTGAATATGTCAAGAAGCTT
TTGCAAAGCTACATCAAAGTTAATTTGTTGATTGTTGAACTTAAATCTGATGCTTTGAAG
GAACGTCATTGGAAACAATTGACAAAACAGTTGCGTGTAAGCTGGAATTTGTCTGATTTA
ACCCTTGGACAAGTTTGGGATGTCAATTTGTTGAAGAATGAAAGTATTGTGAAAGACATA
ATTTTGGTCGCACAAGGTGAAATGGCATTAGAAGAGTTCTTGAAACAAGTTCGTGAATCG
TGGCAAAACTATGAGCTCGATTTAATCAATTATCAAAATAAATGTCGAATTATTCGTGGA
TGGGATGATTTGTTCAATAAAATCAAAGAACACATTAATTCTGTTGCTGCTATGAAACTT
TCACCATATTACAAAGTTTTTGAAGAAGAAGCATTGACATGGGAAGAGAAATTAAATCGT
ATTAACTCGTTATTCGATGTCTGGATTGATGTTCAAAGGCGTTGGGTTTATCTTGAAGGA
ATTTTTAGTGGTTCAGCTGATATTAAGACACTCTTGCCTGTTGAAACAAGTCGTTTCCAG
AGTATTAGTTCTGAATTTTTGGGATTGATGAAGAAAGTAGCAAAATCACCGAAAGTTATG
GATGTCTTAAATATCCCAGCTGTTCAAAGATCACTTGAACGTTTAGCTGATTTACTTGGA
AAAATTCAAAAAGCTCTTGGTGAATATTTAGAACGTGAAAGAACATCATTCCCAAGATTC
TATTTTGTTGGTGACGAAGATTTGTTGGAAATTATTGGTAACAGCAAAAACGTTGCTCGC
TTGCAAAAGCATTTCAAGAAAATGTTTGCTGGAATTGCTTCAATTATTTTGAATGAAGAT
AACACAATTATTCTTGGAATCGCATCACGTGAAGGAGAAGAAGTCAGTTTCATTCGTCCA
GTTTCAACTGTTGAACATCCAAAAATCAATGAATGGCTTACACTTGTTGAAAAAGAAATG
AGATTTACACTTGCTTCTTATTTAGCTCAAGCTGTTCAAGATATTAAGCAATTCAAAGAT
GGTCCAATTGATTCGCAAAAGTTCATGGAATGGTGCGATAAATATCAAGCACAGATTGTA
GTTCTTGCTGCACAAATCTTGTGGTCTGAAGATGTAGAAAGTGCATTGCAGCAAGCTCAA
GATAATCCAGGAAAAAATCCGTTAAATCGTGTGTTGTCATCCGTTGAATCGACATTGAAT
GTCTTAGCAGATTCAGTTTTGCAAGAACAACCACCATTGCGACGAAAGAAACTAGAGCAT
TTAATTAATGAATTTGTGCATAAAAGAACTGTCACAAGACGTTTACTGAATGCTGGTGTT
AATAATCCAAAATCATTCCATTGGCTTACTGAAATGCGTTTCTACTTTGATCCTCGTCAA
ACTGAAGTTTTAGAACAATTGACAATTCATATGGCAAATGCAAGATTCTATTATGGATTC
GAATATTTGGGAGTTCAAGATCGTCTTGTTCAAACACCTTTGACTGATCGTTGCTATCTT
ACAATGACACAAGCTTTGGAAGCCAGATTAGGTGGTTCACCATTTGGCCCTGCCGGCACA
GGCAAAACAGAGAGTGTGAAAGCACTTGGAAATCAACTCGGTCGTTTCGTTCTCGTTTTC
AATTGTGATGAGACTTTTGACTTCCAAGCAATGGGAAGAATTTTTGTTGGTTTATGTCAA
GTCGGGGCATGGGGATGTTTTGATGAATTCAATCGATTGGAAGAGAGAATGCTTTCTGCT
GTTTCTCAGCAAATTCAAACAATTCAAGAAGCACTCAAATCTCAAAGCGATTCAAAAACT
ACAATCAGTGTAGAATTAGTTGGAAAACAAGTTCGTGTGAGCACTGATATGGCGATTTTC
ATTACTATGAATCCTGGTTATGCTGGACGTTCAAATCTTCCTGATAATTTGAAGAAACTC
TTCCGATCACTTGCAATGACAACACCTGATCGTCAATTGATTGCTGAAGTTATGTTATTC
TCTCAAGGATTTAGAACAGCAGAGAAACTCGCATGTAAAATTGTTCCATTCTTCAAATTG
TGCGATGAACAATTGAGCAATCAATCACATTACGATTTCGGTTTGAGAGCATTGAAATCA
GTTCTTGTATCAGCTGGTAATGTGAAACGTGATCGAATTATGAGAATAAAAGACAACATG
AGACAAGCTGGTGAAGAAAATATTGATGAAGGCACAATTGCTGAAAATCTACCAGAGCAA
GAAATTCTCATTCAGTCTGTTTGTGAAACAATGGTTCCAAAACTTGTTGCTGAAGATATT
CCATTACTTTTCTCACTCTTGAATGATGTATTCCCGAATGTTGGCTATACTCGTGCAGAA
ATGAAAGGACTTAAGGATGAAATCAAGAAAGTTTGTGCTGAAGAATATCTCGTTACTGGC
GAAGGTGATGAACAAGGAGCAGCTTGGATGGAAAAGGTTCTTCAACTTTATCAAGTATCA
ATCATTTCTCATGGTTTAATGATGGTTGGACCTTCAGGATCTGGTAAATCGACAGCATGG
AAAGTGTTATTAAAAGCTCTCGAAAGATATGAAGGTGTTGAAGGAGTTGCTCATGTAATT
GATCCTAAAGCAATTTCTAAAGAAACACTTTATGGTGTTCTTGATCCAAATACAAGAGAA
TGGACTGATGGTCTTTTTACTCACATTTTGAGAAAAATTATTGACAACGTTCGTGGTGAA
ATCAATAAACGTCAGTGGATTATTTTTGATGGTGATGTAGATCCAGAATGGGTTGAAAAT
CTTAACTCTGTACTTGATGATAACAAATTGCTTACATTACCCAATGGTGAACGTCTTTCA
TTGCCACCAAATGTTCGTATTATGTTTGAAGTTCAAGATTTGAAGTATGCAACATTGGCT
ACTGTTTCTCGTTGCGGTATGGTTTGGTTCAATGAAGATGTATTAAGTACTGAAATGGTG
TTTGAAAATTACTTTGCTCGCATCAAGAGTATTCCATTGGAAGAAGGAGAAGACGACAGT
TTCCTTCAGCCAGCTGCAAAAGCCAATAAAGAGAAGGAAGAAGAATTGTCACCAGCTCTT
CAAACACAAAGAGAAATTGCAGCTTTTCTTCAACCATATTTCTCAGCTGATGGTATTGTT
GTTCGCTGTTTAGAATATGCACTAACACAAGAGCACATTATGGATTTCACTCGATTACGT
GCATTAGGATCATTATTCTCTATGTTAAATCAAGGAATCAGAAATGTATTAGCTTATAAT
CAACTTCATCCTGATTTCCCACTTGCTTCTGAAAAACTTGAACAATATATTCCTCGACAT
TTAGTTTATTCAATCTTATGGTCATTTGCTGGTGATGCAAAATTGAAAGCTCGTATTGAT
TTGGGTGATTTTATTAGATCAATCACAACAATTCCACTTCCATCTCAAAGTGGTGCACCA
ATCATAGATTACGAAGTTACAATTCAAGGAGAGTGGCTTCCATGGTCAAATAAAGTTCCA
GTCATTGAAGTTGAAACCCATAAAGTTGCTGCTCCAGATATTGTGGTACCCACACTTGAT
ACAGTTCGTCATGAATCACTTCTTTACACTTGGCTTGCTGAACATAAACCATTGGTTTTA
TGTGGTCCACCAGGCAGTGGTAAAACTATGACACTCTTCTCGGCTTTGCGTGCTTTGCCT
GATATGGAAGTCGTTGGTCTTAACTTTTCATCAGCTACAACACCAGAACTTTTGTTGAAA
ACATTTGATCATTATTGTGAATATCGAAAAACACCAAATGGTGTAGTTCTTGCACCAGTT
CAAATCGGAAAATGGCTTGTTCTTTTCTGTGATGAAATCAACTTACCGGACATGGACGCT
TATGGGACACAGAGAGTCATTTCATTCTTGCGACAACTTGTTGAACACAAAGGATTTTAT
CGTGCATCTGATCAGAGCTTTGTTATGCTTGAAAGAATTCAATTTGTTGGTGCTTGTAAT
CCACCTACTGATCCTGGGCGAAAACCACTTTCTCATCGCTTCTTACGTCATGTTCCAATT
ATTTATGTCGATTATCCTGGTGAAACATCATTAAAGCAAATTTATGGAACATTTTCACGA
GCAATGTTGAGAATGATGCCGAGCTTGAGAGGATATGCTGAACCATTGACAAATGCTATG
GTTGAATTTTATTTAGCATCACAAGATCGCTTTACTCAAGATATGCAGCCGCATTATGTT
TACTCACCTCGTGAAATGACAAGATGGGTGAGAGGAATTTGTGAAGCAATTCGACCACTT
GACAATTTGCCGATTGAAGGATTAGTTCGATTATGGGCACATGAAGCTTTGAGATTGTTC
CAAGATCGACTTGTTGAAGAATCAGAAAGACGTTGGACAAATGAGAATATTGATGTTGTA
GCAATGAAGCATTTCCCATCAATTGACAGAGAGAAAGCTCTTGAGCGTCCAATTTTGTAT
TCGAACTGGTTATCAAAAGATTATGTTCCAGTTAATCGTCAAGAATTGCGTGATTATACT
AAAGCAAGATTGAAAGTTTTCTATGAAGAAGAATTGGATGTTCCACTTGTACTTTTCGAT
GAAGTTTTGGAACATGTATTGAGAATCGATCGTATATTTAGACAACCACAAGGGCATTTA
CTCTTAATTGGAGTTTCAGGAGCAGGAAAAACAACTTTGAGTAAATTTGTTGCATGGATG
AATGGATTGAGTATTTTCCAAATTAAAGTTCATAATAAATATAGTGGTAATGATTTCGAT
GAAGATTTAAGAACTGTTTTACGTCGATCGGGATGCAAAGATGAAAAGATTTGTTTCATT
CTTGATGAGTCTAATGTTTTAGAGTCTGGATTTTTGGAAAGAATGAATACACTCTTAGCC
AACGGAGAAGTTCCTGGATTGTTTGAAGGCGATGAATTTACAACACTCATGACTCAATGT
AAAGAAGGAGCACAACGTGAAGGTTTAATGCTTGATTCAGTTGATGAACTTTACAAATGG
TTTACACAACAAGTAATGAAGAATTTGCATGTTGTATTTACAATGAATCCAAGTACTGAT
GGTTTGAAAGATCGTGCAGCAACATCACCTGCTTTGTTTAATCGTTGTGTTCTCAATTGG
TTTGGTGATTGGTCTGATTCAGCATTGTTCCAAGTTGGCAAAGAATTTACAATTCGTATG
GATTTGGAGAGATCAAATTGGATTGCACCAGATTTCTTCCCATCAGCATGTCCCAATATT
CCGGCATCACCATCACATCGAGATGCAGTTATCAATGCTACAGTTTATGTCCATCAAACT
CTTCATCGTGCAAACTCACGTTTAGCTAAGAGAGGATCTCGAACAATGGCAATTACACCT
CGACATTTTCTCGATTTTATTCATCACTTTGTCAAGTTGTATGGTGAAAAGAGAAGCGAT
TTGGAAGAACAACAGCTTCATCTTAATGTCGGTTTAAATAAAATTGCTGAGACTGTAGAG
CAAGTTGAAGAATTACAAAAATCTTTGGCTGTCAAAAAAGAAGAACTTCAACAAAAGAAC
GACGCTGCCAACTCAAAATTGAAGCAAATGTTTAAAGATCAACAAGAAGCTGAGAAGAAG
AAGGTTCAATCTCAAGAGATTCAACAACAACTTGCTGAACAAACAATCAAGATTGAAGAA
AAGAGAAAAGATGTCATGGCAGATTTAGCTTTGGTAGAACCAGCAGTTATAGAAGCACAG
CAAGCCGTCAGTGGAATAAAGAAGAAACAATTGGCTGAAGTTCGATCTATGGCCAATCCA
CCAGCACCCGTGAAATTAGCTTGTGAATCAATTTGTTTACTCTTGGGAGAAAATGCAATT
GACTGGAAGTCAATTCGTGGTGTTCTCGTCAAGGATTCTTTTATATCAAATATTGTCAAC
TTTGATACGTTGCAAATAACGTAA

>g1059.t3 Gene=g1059 Length=3347
MGDSLENIDQPIESQQNVSIVDQKAFNNYLRKCVNLFFDDEEFNSTKLEEALDENRANQE
CIKKFLSDPQVQTLYIQKSSSKDDEGDQAQEGEEEKESSQYYISNEVHFTNPRYQSLVCV
KRGTVIEADKSIHSQLRLINFSEGSPYETLHSYISKTLAPYFKSYVKESGRADRDGDKMA
PSVEKKLAELEMGLLHLQQNIDIPEITLPIHPTVQSIIKRCADEGRKAKVGDFGDRVDDS
SFLNQLQNGVNRWIKEIQKVTKLDRDPSSGTALQEVSFWLNLERALYRIQEKRESLEVAL
TLDILKHGKRFQATVAFDTDTGLKQALSMVADYNPLMKDFPINDLLSATELDRIRSAVQL
IFSHLRKIRNTKYPIQRALRLIEAISRDLSQQLLKVLGTRRLMHIPFDEFERVMNQCFEI
FCCWDDEYEKLQGLLRDIVKKKRDEHLKMVWRVNPAHKKLQQRMEHMRKFRRQHEQLRTV
IVRVLRPTRQQSNQPADIPIDSKPSLEAADANAIEEVNLAYENVKEVECLDISKEGSEAY
DAAVKRYEERIDRVEARITAHLRDQLGTAKNANEMFRIFSRFNALFVRPHIRGAIREYQT
QLIQRVKDDIEGLHEKFKVQYPQSKSCRLSVVRDLPPVAGSIIWARQIDNQLTMYLKRVE
DVLGKGWESHIDGQKLKNDGDSFRAKLSTNELFMDWARKVQERNLGITGRIFLIETARSR
TRSGNTLKLKVNFLPEIITLYKEVRNLKSLGFRVPLAIVNKAHQANQIYPFAISLIESNR
TYERTLDKIEDRASIVPLVAQLRKDVLNLVSEGIALVWESYKLDTYVQRLSEAVTQFQEK
VEDLLVVEEQLDVDIRSLETCPYSAATFADILSKIQHAVDDLSLRQYSNLHVWVQRLDEE
VEKKLAARLQAGIQAWTDALTGNKKDVDLSMDTDAPVQPTIKPGGDPQIQNAIHEIRITN
QQMYLFPSIEEARFQIMQQLFAWQAIVTSQTRLQSSRYQVGLDKPVSQTYRNLLTKLPGG
SEPLEAGYAAIDSKMSEIRAYVDEWLRYQSLWDLQPDVLYGRLGEDINLWIKCLNDIKKS
RTTFDTSDTRRAYGPIIIDYAKVQAKVTLKYDSWHKEALSKFGQLLSNEMSTFHTKVSKS
RTDLEQQSIEAASTSDAVTFITYVQSLKKEMLVWDKQVEVYREAQRILERQRFQFPNNWL
HVDNIEGEWSAFNEIMKRKDSAIQTQVASLQSKIVAEDKAVETRTVEFLNDWEKNKPTAG
RTRPDEALQQLQIFETKFSRLKEERDNVAKAKEALELQESAIPNNSSERMSVVLEELQDL
RGVWSELAKIWQQIDETREKPWLSVQPRKLRQSLEAMMSQLKELPARLRMYESFEYVKKL
LQSYIKVNLLIVELKSDALKERHWKQLTKQLRVSWNLSDLTLGQVWDVNLLKNESIVKDI
ILVAQGEMALEEFLKQVRESWQNYELDLINYQNKCRIIRGWDDLFNKIKEHINSVAAMKL
SPYYKVFEEEALTWEEKLNRINSLFDVWIDVQRRWVYLEGIFSGSADIKTLLPVETSRFQ
SISSEFLGLMKKVAKSPKVMDVLNIPAVQRSLERLADLLGKIQKALGEYLERERTSFPRF
YFVGDEDLLEIIGNSKNVARLQKHFKKMFAGIASIILNEDNTIILGIASREGEEVSFIRP
VSTVEHPKINEWLTLVEKEMRFTLASYLAQAVQDIKQFKDGPIDSQKFMEWCDKYQAQIV
VLAAQILWSEDVESALQQAQDNPGKNPLNRVLSSVESTLNVLADSVLQEQPPLRRKKLEH
LINEFVHKRTVTRRLLNAGVNNPKSFHWLTEMRFYFDPRQTEVLEQLTIHMANARFYYGF
EYLGVQDRLVQTPLTDRCYLTMTQALEARLGGSPFGPAGTGKTESVKALGNQLGRFVLVF
NCDETFDFQAMGRIFVGLCQVGAWGCFDEFNRLEERMLSAVSQQIQTIQEALKSQSDSKT
TISVELVGKQVRVSTDMAIFITMNPGYAGRSNLPDNLKKLFRSLAMTTPDRQLIAEVMLF
SQGFRTAEKLACKIVPFFKLCDEQLSNQSHYDFGLRALKSVLVSAGNVKRDRIMRIKDNM
RQAGEENIDEGTIAENLPEQEILIQSVCETMVPKLVAEDIPLLFSLLNDVFPNVGYTRAE
MKGLKDEIKKVCAEEYLVTGEGDEQGAAWMEKVLQLYQVSIISHGLMMVGPSGSGKSTAW
KVLLKALERYEGVEGVAHVIDPKAISKETLYGVLDPNTREWTDGLFTHILRKIIDNVRGE
INKRQWIIFDGDVDPEWVENLNSVLDDNKLLTLPNGERLSLPPNVRIMFEVQDLKYATLA
TVSRCGMVWFNEDVLSTEMVFENYFARIKSIPLEEGEDDSFLQPAAKANKEKEEELSPAL
QTQREIAAFLQPYFSADGIVVRCLEYALTQEHIMDFTRLRALGSLFSMLNQGIRNVLAYN
QLHPDFPLASEKLEQYIPRHLVYSILWSFAGDAKLKARIDLGDFIRSITTIPLPSQSGAP
IIDYEVTIQGEWLPWSNKVPVIEVETHKVAAPDIVVPTLDTVRHESLLYTWLAEHKPLVL
CGPPGSGKTMTLFSALRALPDMEVVGLNFSSATTPELLLKTFDHYCEYRKTPNGVVLAPV
QIGKWLVLFCDEINLPDMDAYGTQRVISFLRQLVEHKGFYRASDQSFVMLERIQFVGACN
PPTDPGRKPLSHRFLRHVPIIYVDYPGETSLKQIYGTFSRAMLRMMPSLRGYAEPLTNAM
VEFYLASQDRFTQDMQPHYVYSPREMTRWVRGICEAIRPLDNLPIEGLVRLWAHEALRLF
QDRLVEESERRWTNENIDVVAMKHFPSIDREKALERPILYSNWLSKDYVPVNRQELRDYT
KARLKVFYEEELDVPLVLFDEVLEHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSKFVAWM
NGLSIFQIKVHNKYSGNDFDEDLRTVLRRSGCKDEKICFILDESNVLESGFLERMNTLLA
NGEVPGLFEGDEFTTLMTQCKEGAQREGLMLDSVDELYKWFTQQVMKNLHVVFTMNPSTD
GLKDRAATSPALFNRCVLNWFGDWSDSALFQVGKEFTIRMDLERSNWIAPDFFPSACPNI
PASPSHRDAVINATVYVHQTLHRANSRLAKRGSRTMAITPRHFLDFIHHFVKLYGEKRSD
LEEQQLHLNVGLNKIAETVEQVEELQKSLAVKKEELQQKNDAANSKLKQMFKDQQEAEKK
KVQSQEIQQQLAEQTIKIEEKRKDVMADLALVEPAVIEAQQAVSGIKKKQLAEVRSMANP
PAPVKLACESICLLLGENAIDWKSIRGVLVKDSFISNIVNFDTLQIT

Protein features from InterProScan

Transcript Database ID Name Start End E.value
29 g1059.t3 CDD cd00009 AAA 1876 1977 0.00632874
30 g1059.t3 CDD cd00009 AAA 2557 2720 9.47495E-12
31 g1059.t3 CDD cd00009 AAA 2904 3018 6.40025E-7
28 g1059.t3 Coils Coil Coil 537 564 -
27 g1059.t3 Coils Coil Coil 1278 1301 -
26 g1059.t3 Coils Coil Coil 3195 3240 -
25 g1059.t3 Coils Coil Coil 3244 3264 -
14 g1059.t3 Gene3D G3DSA:1.20.140.100 - 1449 1615 3.8E-64
15 g1059.t3 Gene3D G3DSA:3.20.180.20 - 1616 1712 5.6E-30
24 g1059.t3 Gene3D G3DSA:1.20.58.1120 - 1713 1872 8.0E-62
20 g1059.t3 Gene3D G3DSA:3.40.50.300 - 1873 2027 8.2E-69
19 g1059.t3 Gene3D G3DSA:1.10.8.710 - 2028 2159 3.8E-47
21 g1059.t3 Gene3D G3DSA:3.40.50.300 - 2187 2719 6.7E-232
18 g1059.t3 Gene3D G3DSA:1.10.472.130 - 2396 2558 6.7E-232
16 g1059.t3 Gene3D G3DSA:1.20.920.30 - 2724 2872 8.6E-55
22 g1059.t3 Gene3D G3DSA:3.40.50.300 - 2873 3082 5.7E-81
17 g1059.t3 Gene3D G3DSA:1.20.920.20 - 3083 3188 9.2E-32
23 g1059.t3 Gene3D G3DSA:1.20.920.60 - 3215 3347 4.3E-31
36 g1059.t3 MobiDBLite mobidb-lite consensus disorder prediction 76 101 -
8 g1059.t3 PANTHER PTHR45703 DYNEIN HEAVY CHAIN 184 3323 0.0
9 g1059.t3 PANTHER PTHR45703:SF8 DYNEIN HEAVY CHAIN 184 3323 0.0
6 g1059.t3 Pfam PF08385 Dynein heavy chain, N-terminal region 1 243 826 1.5E-124
4 g1059.t3 Pfam PF08393 Dynein heavy chain, N-terminal region 2 1312 1711 6.3E-115
3 g1059.t3 Pfam PF12774 Hydrolytic ATP binding site of dynein motor region 1858 2217 5.2E-128
7 g1059.t3 Pfam PF17852 Dynein heavy chain AAA lid domain 2418 2536 1.1E-15
5 g1059.t3 Pfam PF12775 P-loop containing dynein motor region 2548 2724 5.9E-37
2 g1059.t3 Pfam PF12780 P-loop containing dynein motor region D4 2895 3173 9.4E-67
1 g1059.t3 Pfam PF12777 Microtubule-binding stalk of dynein motor 3188 3346 2.5E-14
32 g1059.t3 SMART SM00382 AAA_5 1891 2039 0.059
35 g1059.t3 SMART SM00382 AAA_5 2202 2353 3.2
33 g1059.t3 SMART SM00382 AAA_5 2574 2724 7.8E-6
34 g1059.t3 SMART SM00382 AAA_5 2916 3082 1.7E-4
11 g1059.t3 SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 1874 2092 1.03E-22
10 g1059.t3 SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 2132 2352 2.26E-16
13 g1059.t3 SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 2568 2835 7.47E-28
12 g1059.t3 SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 2888 3188 1.58E-29

Transmembrane regions from TMHMM

Disordered region

IUPRED3 score over 0.5 is predictive of a disordered region.

GO terms from InterProScan

GOID TERM ONTOLOGY
GO:0005524 ATP binding MF

KEGG

Orthology

This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).

Expression

Transcript expression in Pv11 cells

TPM values are indicated as average +/- STDEV.

Differential expression

Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed