| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_1 | g12978 | g12978.t1 | isoform | g12978.t1 | 27300998 | 27307536 |
| chr_1 | g12978 | g12978.t1 | exon | g12978.t1.exon1 | 27300998 | 27301835 |
| chr_1 | g12978 | g12978.t1 | cds | g12978.t1.CDS1 | 27300998 | 27301835 |
| chr_1 | g12978 | g12978.t1 | exon | g12978.t1.exon2 | 27301894 | 27302243 |
| chr_1 | g12978 | g12978.t1 | cds | g12978.t1.CDS2 | 27301894 | 27302243 |
| chr_1 | g12978 | g12978.t1 | exon | g12978.t1.exon3 | 27302299 | 27306733 |
| chr_1 | g12978 | g12978.t1 | cds | g12978.t1.CDS3 | 27302299 | 27306733 |
| chr_1 | g12978 | g12978.t1 | exon | g12978.t1.exon4 | 27306798 | 27306870 |
| chr_1 | g12978 | g12978.t1 | cds | g12978.t1.CDS4 | 27306798 | 27306870 |
| chr_1 | g12978 | g12978.t1 | exon | g12978.t1.exon5 | 27306924 | 27307054 |
| chr_1 | g12978 | g12978.t1 | cds | g12978.t1.CDS5 | 27306924 | 27307054 |
| chr_1 | g12978 | g12978.t1 | exon | g12978.t1.exon6 | 27307112 | 27307536 |
| chr_1 | g12978 | g12978.t1 | cds | g12978.t1.CDS6 | 27307112 | 27307536 |
| chr_1 | g12978 | g12978.t1 | TSS | g12978.t1 | NA | NA |
| chr_1 | g12978 | g12978.t1 | TTS | g12978.t1 | NA | NA |
>g12978.t1 Gene=g12978 Length=6252
ATGAATAATTCAAGTGAAAAAGGTGATGACATAGTTGTTACAGGAATGTCTGGTCGACTT
CCACAATCACGAAATATTAAAGAATTTGCAACAAATCTTTTCAATAAAGTTGATTTGGTT
GATGATTCTGAAGAGCGTTGGAAGCATGTTTATGATGAACTTCCAAATCGTTTTGGGAAA
ATTTCTGATGTTGATAAGTTTGACTCATCATTCTTCTCAATGTTGAATGTCCAAGCTAAA
TATACAGACCCACAAATGAGAATTCTACTGGAGCATACTTATGAAGCAATTTTGGATGCT
GGTATTAGTCCTCAAACGTTGATAGGAAGTAATACAGGTGTTTTTGTTGGTTGTTGTACA
TCTGATTCAAAAGATAGTTTTATTAATCAAACATATGCTGCACCTCATAGCACTGTTACG
ATCGGAAATAGCACATTTTCATTTTCTAACCGTGTTTCTTATACACTCGGTTTAAGTGGA
CCTTCCTTAACACTCGACACTGCATGCTCAAGCTCTGGTTATGCTCTCGATTGTGCTTTT
CATTATTTAAATTCAGGAGTTTGTGATGCTGCTATTGTAGCTGGGACTCAATTGACTTTA
GTGCCTTCGATGTTCTTTGAATATGAATCTTTGGGAATACTTTCTAAAAATGGAGTTTCT
AGACCTTTTGATGAATCTGCAAATGGTTTAGTTCGTGCTGAAGCAATTTGTGCAATTTTT
CTACAAAAACGAAAAGATGCAAAAAGAATTTATGCTCAAATAATTAATTCAAAAACAAAC
AATGATGGTTTTAAAAAAGAAGGTTCAACACTTCCTTCTAAACAATCGCAAGAAAAACTC
ATGAAACGAGTTTATAAAGATTTGAATTTTAATCCAGCAGAAATTAAAATTGTTGAAGCT
CATTCTACAAGTACAGTACTTGGTGATTTTCAAGAAGTTTCTGCTATTGATGCAGTTTTC
TGTGAAAATCGTTCAGATAAGCTCATTATTGGTAGTGTAAAGTCTAATACAGGACATGCA
GAAGCTGCAAGTGGAATCGTATCAACAATTAAAATTTTAATTGCACTCGATAATGGAAAA
TTTCCACCTAATATAAATTTGATGAACTTACGTAAAGATATCCCAGCCTTTGCTGAAAAT
CGAATTGAAGTTGCAACTGAAACAATTGAGCTAACATCACCTTATATTGCACAAAACAGT
TTTGGAATTGGTGGATCAAATGCTCACATTTTGTTCAAACAAAATTTGAAAGTTAAAGAT
AGTTTAAAATTGTCAAAAAGTAATCTTGAATATATGGTTTTATGGTCAGGTAGAACTGAA
GATGCCATTCATACGATATTTGATGATATTTCAAGTAAACCACTGGATGTTGAGTTTTTA
GCTTTACTTCATAATTCACAAATAAAAACACTTGATGCTAATTCTTATAGAGGTTATGGA
ATATTTAAAAATAATGAAGATAAAGCATCTTGTATTACTCGTAATATTCAACATTTTGAT
GGAGTTCGACGAGAAATTGTTTTCGTGTATGCTGGTATGGGAACTCAATGGTTCAAAATG
GGACAAGATTTAATGCAAATTCCACTTTTTGCTAGTTCAATTGAAAAATCTCATGAGATT
TTAAAAAAGAAAGATGTCGATTTGAAGTCTATTATAACATCAAATGATCCAACTATTTAT
GAAAACTTTTTAAATTCATCATTGGGAATAATTTCAATTGAAATGGCATTGACTGACATT
TTGCATGAACTTAATATTAAGCCTGATTGGATAATTGGACACTCTTTTGGTGAGATTGGT
TGTTCATATGCTGATGGTTGTTTTACAAGAGAAGAAGCTTTGATAACTGCTTATCTTAGA
GCTAAAATAACTCTCGATTCTGGAATTCAAGGTGGTAGTATGGCTGCAATTGGAATGCAT
TACAGTGAACTTGAAAAGATTACTCCAAAAGAAATTGATATTGCATGTCAGAATAGTAAA
GAATTGACAACAATTAGTGGACCAAAGAACATCGTTGCTGACTTTGTCGATTATTTGAAA
TCTCAACATTGTTTTGCTAGGGAAGTCGCTTGTGTCGGAGTTCCATTTCATAGTCGATAC
ATCAAAGAAGTTGGTATAAAATTCCGTGATGAATTAGCAAAAACAATTACAAACCCAAAA
GTCCGTTCATCAAATTGGATTACTGCAACTTATCCTGAAGAATGTGTTGACAGTAAATTT
TGTGATGCAAGTTATCATGCGAATAATTACATGAATCCAGTTTTCTTTGAAAATGCAGCC
AAAAGATTGCCACAAAATGCGCTAGCTATCGAAATTTCACCTCATGGTTTTCTTCAATCA
CTTTTAAAATCAGCATTAAAGAAAAGTGTTTATGTTGGTTTGACTAATAAAAATAAAAGT
GATGGTAAAGCACTTTTTTTTGAAGGAATCGGAAAAATCTTTCAATACGGCGTTGATGTT
GATATTAGCAAGTTATATCCAAATATTGAATTTCCAGTATCAAGAGGTACTCCAATGATT
TCGCCTCTTATCAAATGGAATCATAGTCAGAGTCATTTTGTGCCATATTTTGACCCAATA
CATTTTCATGCTCATTATAAGAAATTATTGAATTTTAGAAACAAGGATTTTGAGTTTCTT
AAACATCATGTAATTGATGATAAACCTGTGGTAGCTGCAGCTTTTTGGGTTTATCTAGCA
TGGAAAAATTTTGCTATTATGCATGGAATGCATTTTGAAAATATGCGTGTAACATTCAGA
GATCTTGAATGTCTACGAGCAACTTACATTCCACCAAATGATGAAATTGTAATAACTGTC
TCAATAAATTCTGCAACTGGAAAATTTGAGTTAATGGAAGGAAAAACTTTGGCAGCACAA
GGATATATTGAAAGAGATGATAATTTGTACATTGGAAAAGTTGAAGAAAGAGCTTATGAT
AAAGATGCTGTGATATTAACTACAAAAGATTTTTATAAGCATGCTCGAGTTCTTGGATAT
CAATATGTGAATGAATTTCAACAAATACATGAAATAACTGATGATGGTTTGATGGGAAAA
GTAAAATGGAATAAAAATTGGACTGCATTTATTGATTGTGTGATTCAAAGTATAATTTTG
ACTTCTAAATTCCATAAACTTGAATTACCTCTTAAAGTCAAGAAAATATCAATTGATCCT
TTCTTACATAAAGAAGCTATTGATAAGGAAATGAAAAAACTCCAATTAAATAATGAGAAT
ACAGAAGATCAAGTTATTTTACTTCCATTTGAAACTGACAGCGTTATAAATATGACAAGA
TGTGCTGGAATTGCATTTTACGAACCAACTTCAATTGCTGTAAATCGTAAAATTCAAAAG
AACATTGCCCTAGAAAGTTCAAAATTTGTACCTTTCACGACTTCTCAAGAAAACTTTGAA
TTCTTCGATGCAATTAAATGTTCAGCTAAATTTTATTTTGAAAATAATCAGAAATTCAAT
TACAAAATTATTGAAATTGACAATAATGAAGAAAAAACTGACTTTGTAGTTGAAATATTT
TCAAAAATAAACAGACAATATCCAGTATCTTTAGATTTAAAGCTTTTAACACCAAAAAAT
GTTGATAGTGTTGATGCTCAAGTAATTAAAGATAAAGATATTTCTACATTTACTTATATT
GATATAGTTTACGTTAAAAATTGCTTGCAAAACGAAGAACTTGTCGAAAAAGTTTATAAA
GCTTTAGCACAGACTGGAGTGTTAATTACACAAGAAAATTTAAATGTAGAAACTTCCAAT
GAAAGGTTTGACATCATGTTGAATTTTAAAATAAAAAGTGGAAATAGAATTATAATGATG
AGGAAGAAAAAAGAAGAAACAGAACTTAATGCAAAGATTTTTGAAATATCTTCAAATATT
GAGTATTGGATTGAAGATTTAAAACAAGAATTACAGAAAATGACCGATGAAAGTAATGAG
AAGAAATATGATAGCATTATTTTGCATTCAAACAATTCCAAAGAAGATTCAGGTATTCTT
GGTTTCTTTAATTGTCTCCGTTTAGAACATCCAGGCATTAATTTCAAATGTTTCATGATT
GACGATGAAAGTGCTCCAAACTTTGATATAGAAAATGAATTTTATAAAAAACAACTTTCA
AAAAATCTTGTCATAAATATCTTCAAAAATGGTCAGTGGGGTTGCTATCAATATCTAAAT
ATTCAAGAAAATAACCAGCTAGAACCATTTAAAGATAATTGTTTTGCAAGTTATACTGAA
AGTGGAAATTTATCAACTCTTAAATGGCGAAATGGTGCATTGAAAAATTTGACACCGGAA
AGTTGTAATAAAGATCTGATGAAAATACAATATGCAGCATTGAATTTTAGAGATGTTGTT
TTTGCTTATGGATATTTACCTGATGAAGCAACTTTTCTAACAGACAGTACTATTGGATTA
GAATTTGCTGGTGTTTTAGCAAAAACTGGAAAACGTCTTACGGGAATCGCTCTTAATGAG
CCTGGAATTGCGACTTATTTTGAAGAGCCAAACATGCCTATTGTCGATATTCCTGACGAT
TGGACAATGGAAGATGCTGCAACAATTCCTGTTGCTTACTTAACAGTTTATTTTGCATTT
TTTGAAACAATAAAAATTGAAGCAGGAAAATCGATTTTGATTCACAGCGGAGCTGGCGGT
GTCGGACAGGCAGCTATTCATGTAGCATTTGGTTATGGTTTGGAAGTTTATACAACTGTT
GGAACAAAAGAAAAGAGGAAATTTTTACTCGAAACATTTCCAAAATTAAAACCTCAAAAT
ATTGGAAATTCAAGAGATACATCTTTCTACAATATGGTCATGAAAGAAACAAATGGCAAA
GGAGTCGATTATGTTCTTAATTCACTTTTTGATGATAAAATGTTAGCATCGGTTAAATGT
CTAGCGAAATTTGGTGTGATGTTAGAAATCGGTGTAGCAGATATTCTCAAAGGAACTAAA
ACTGATCTAAAATATCTCGAAAAATTTGCAACAATCAAATGGGTAAAAATTGATAGAGTC
GATCGAAAAAGTCCAGAAATAACGAATACTATTGAACATATAAAAAGAGATATTTCATCC
GGTATAGTTAAACCATTGAGTCGAACAGTTTTTGATGCTAAAGATATTGCAAAAGCTTTT
CAATATATGTCAACTGGCAATCATATTGGAAAAGTTTTGATTAAAATACGTGAAAATGAA
AATGATGAAGCAACAGTTCCAATTAATGTTACACCAAGATTTTATTGCAATTCTGATCAA
TCTTATATTGTTGTTGGTGGCTTAGGTGGACTTGGACTTGAATTTTCGCAATGGTTGATT
GGTAGAAAATGTAAAAAATTGATATTGAGTTCAAGTCGTGGCATAAGTAACCAATATCAA
GCTTATAAAATTAAATATTGGAAATCATTTGATGTTGAAATAACTGTTAATACTTCAGAC
GTAACCACAGCAGAAGGATGTGAACAATTAATAAAAGCAGCAAATAATTTAGGACCTGTT
GGAGGAATTTTTAATTTTGCTGTTGTGCTCAATGATGGAGTTTTCCTGAATCAAACAACA
GAAACATTTAATCATGTACTGGCACCAAAAGCAATTGCTACAAAACACTTGCATGAGCAA
TCACTAAAACTTTGCCCCAAGTTGAAGCATTTTGTTATTTATTCAAGTATTTCATGCGGT
AGAGGAAACACTGGTCAATCTAATTATGGTATGGCTAATTCAGTTATGGAAAGAATTATT
GAAAAACGTCATTCAATGGGATTGCCTGCTAAAGCTATTCAATTGGGTGCAATTGGGGAT
GTTGGTGTTTTTGCAGATGTTCAGCATAAGATAAAAGTTGACTTTGAAATTCCAGTTCAA
TCAATTGCTTCATTGCTTGAACATCATGATGCACTTCTATTAAACCCTGAACCAATTATG
TCTTGTATGGCAACATTTAAGAAAAAAGGAGTGACTTTAGAGAAGGAAGGATTCATTGAT
ATGCTCATGAGAGTTTTAAATATTGAAGATCGTAAAACAATTTCAATGAATTCAACTTTT
TCACAACTTGGAATTGATTCACTTGGTGGAGTTGAAATGATGCAAATGATAGAACGAGAA
TATGGAGTAACATTAACTTCAAATGAACTTAGATCGTTGACAATATCAGAGTTAGAAGCT
AGAGTTATGATTAATTCTAAAACTATTGAAACTGAATCAGAAGAAGTCAATTATGAGGAA
ATGGATTTTTAA
>g12978.t1 Gene=g12978 Length=2083
MNNSSEKGDDIVVTGMSGRLPQSRNIKEFATNLFNKVDLVDDSEERWKHVYDELPNRFGK
ISDVDKFDSSFFSMLNVQAKYTDPQMRILLEHTYEAILDAGISPQTLIGSNTGVFVGCCT
SDSKDSFINQTYAAPHSTVTIGNSTFSFSNRVSYTLGLSGPSLTLDTACSSSGYALDCAF
HYLNSGVCDAAIVAGTQLTLVPSMFFEYESLGILSKNGVSRPFDESANGLVRAEAICAIF
LQKRKDAKRIYAQIINSKTNNDGFKKEGSTLPSKQSQEKLMKRVYKDLNFNPAEIKIVEA
HSTSTVLGDFQEVSAIDAVFCENRSDKLIIGSVKSNTGHAEAASGIVSTIKILIALDNGK
FPPNINLMNLRKDIPAFAENRIEVATETIELTSPYIAQNSFGIGGSNAHILFKQNLKVKD
SLKLSKSNLEYMVLWSGRTEDAIHTIFDDISSKPLDVEFLALLHNSQIKTLDANSYRGYG
IFKNNEDKASCITRNIQHFDGVRREIVFVYAGMGTQWFKMGQDLMQIPLFASSIEKSHEI
LKKKDVDLKSIITSNDPTIYENFLNSSLGIISIEMALTDILHELNIKPDWIIGHSFGEIG
CSYADGCFTREEALITAYLRAKITLDSGIQGGSMAAIGMHYSELEKITPKEIDIACQNSK
ELTTISGPKNIVADFVDYLKSQHCFAREVACVGVPFHSRYIKEVGIKFRDELAKTITNPK
VRSSNWITATYPEECVDSKFCDASYHANNYMNPVFFENAAKRLPQNALAIEISPHGFLQS
LLKSALKKSVYVGLTNKNKSDGKALFFEGIGKIFQYGVDVDISKLYPNIEFPVSRGTPMI
SPLIKWNHSQSHFVPYFDPIHFHAHYKKLLNFRNKDFEFLKHHVIDDKPVVAAAFWVYLA
WKNFAIMHGMHFENMRVTFRDLECLRATYIPPNDEIVITVSINSATGKFELMEGKTLAAQ
GYIERDDNLYIGKVEERAYDKDAVILTTKDFYKHARVLGYQYVNEFQQIHEITDDGLMGK
VKWNKNWTAFIDCVIQSIILTSKFHKLELPLKVKKISIDPFLHKEAIDKEMKKLQLNNEN
TEDQVILLPFETDSVINMTRCAGIAFYEPTSIAVNRKIQKNIALESSKFVPFTTSQENFE
FFDAIKCSAKFYFENNQKFNYKIIEIDNNEEKTDFVVEIFSKINRQYPVSLDLKLLTPKN
VDSVDAQVIKDKDISTFTYIDIVYVKNCLQNEELVEKVYKALAQTGVLITQENLNVETSN
ERFDIMLNFKIKSGNRIIMMRKKKEETELNAKIFEISSNIEYWIEDLKQELQKMTDESNE
KKYDSIILHSNNSKEDSGILGFFNCLRLEHPGINFKCFMIDDESAPNFDIENEFYKKQLS
KNLVINIFKNGQWGCYQYLNIQENNQLEPFKDNCFASYTESGNLSTLKWRNGALKNLTPE
SCNKDLMKIQYAALNFRDVVFAYGYLPDEATFLTDSTIGLEFAGVLAKTGKRLTGIALNE
PGIATYFEEPNMPIVDIPDDWTMEDAATIPVAYLTVYFAFFETIKIEAGKSILIHSGAGG
VGQAAIHVAFGYGLEVYTTVGTKEKRKFLLETFPKLKPQNIGNSRDTSFYNMVMKETNGK
GVDYVLNSLFDDKMLASVKCLAKFGVMLEIGVADILKGTKTDLKYLEKFATIKWVKIDRV
DRKSPEITNTIEHIKRDISSGIVKPLSRTVFDAKDIAKAFQYMSTGNHIGKVLIKIRENE
NDEATVPINVTPRFYCNSDQSYIVVGGLGGLGLEFSQWLIGRKCKKLILSSSRGISNQYQ
AYKIKYWKSFDVEITVNTSDVTTAEGCEQLIKAANNLGPVGGIFNFAVVLNDGVFLNQTT
ETFNHVLAPKAIATKHLHEQSLKLCPKLKHFVIYSSISCGRGNTGQSNYGMANSVMERII
EKRHSMGLPAKAIQLGAIGDVGVFADVQHKIKVDFEIPVQSIASLLEHHDALLLNPEPIM
SCMATFKKKGVTLEKEGFIDMLMRVLNIEDRKTISMNSTFSQLGIDSLGGVEMMQMIERE
YGVTLTSNELRSLTISELEARVMINSKTIETESEEVNYEEMDF
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 28 | g12978.t1 | CDD | cd00833 | PKS | 9 | 411 | 4.24598E-139 |
| 29 | g12978.t1 | CDD | cd05195 | enoyl_red | 1448 | 1734 | 1.64958E-87 |
| 27 | g12978.t1 | CDD | cd08954 | KR_1_FAS_SDR_x | 1752 | 1979 | 1.22151E-57 |
| 26 | g12978.t1 | Coils | Coil | Coil | 1064 | 1084 | - |
| 25 | g12978.t1 | Coils | Coil | Coil | 1304 | 1324 | - |
| 21 | g12978.t1 | Gene3D | G3DSA:3.40.47.10 | - | 9 | 414 | 1.7E-130 |
| 19 | g12978.t1 | Gene3D | G3DSA:3.30.70.3290 | - | 430 | 852 | 9.4E-147 |
| 24 | g12978.t1 | Gene3D | G3DSA:3.40.366.10 | - | 502 | 817 | 9.4E-147 |
| 20 | g12978.t1 | Gene3D | G3DSA:3.10.129.110 | - | 866 | 1120 | 3.8E-48 |
| 18 | g12978.t1 | Gene3D | G3DSA:3.40.50.720 | - | 1302 | 1983 | 1.9E-234 |
| 23 | g12978.t1 | Gene3D | G3DSA:3.90.180.10 | - | 1403 | 1754 | 1.9E-234 |
| 22 | g12978.t1 | Gene3D | G3DSA:1.10.1200.10 | - | 1994 | 2075 | 3.9E-14 |
| 9 | g12978.t1 | PANTHER | PTHR43775 | FATTY ACID SYNTHASE | 5 | 2073 | 0.0 |
| 10 | g12978.t1 | PANTHER | PTHR43775:SF23 | FATTY ACID SYNTHASE 3 | 5 | 2073 | 0.0 |
| 4 | g12978.t1 | Pfam | PF00109 | Beta-ketoacyl synthase, N-terminal domain | 10 | 247 | 8.8E-55 |
| 1 | g12978.t1 | Pfam | PF02801 | Beta-ketoacyl synthase, C-terminal domain | 251 | 367 | 3.2E-34 |
| 8 | g12978.t1 | Pfam | PF16197 | Ketoacyl-synthetase C-terminal extension | 372 | 481 | 8.6E-22 |
| 6 | g12978.t1 | Pfam | PF00698 | Acyl transferase domain | 507 | 807 | 1.4E-51 |
| 3 | g12978.t1 | Pfam | PF14765 | Polyketide synthase dehydratase | 872 | 1060 | 3.1E-9 |
| 7 | g12978.t1 | Pfam | PF13602 | Zinc-binding dehydrogenase | 1604 | 1734 | 1.5E-12 |
| 2 | g12978.t1 | Pfam | PF08659 | KR domain | 1761 | 1939 | 9.5E-41 |
| 5 | g12978.t1 | Pfam | PF00550 | Phosphopantetheine attachment site | 2000 | 2061 | 3.4E-9 |
| 30 | g12978.t1 | ProSitePatterns | PS00606 | Beta-ketoacyl synthases active site. | 160 | 176 | - |
| 36 | g12978.t1 | ProSiteProfiles | PS50075 | Carrier protein (CP) domain profile. | 1992 | 2069 | 11.405 |
| 34 | g12978.t1 | SMART | SM00825 | Beta-ketoacyl synthase | 11 | 415 | 3.4E-98 |
| 32 | g12978.t1 | SMART | SM00827 | Acyl transferase domain in polyketide synthase (PKS) enzymes. | 509 | 799 | 5.5E-25 |
| 31 | g12978.t1 | SMART | SM00829 | PKS_ER_names_mod | 1422 | 1734 | 3.9E-85 |
| 35 | g12978.t1 | SMART | SM00822 | This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. | 1760 | 1941 | 1.5E-21 |
| 33 | g12978.t1 | SMART | SM00823 | Phosphopantetheine attachment site | 1995 | 2053 | 0.0067 |
| 12 | g12978.t1 | SUPERFAMILY | SSF53901 | Thiolase-like | 7 | 413 | 9.77E-63 |
| 11 | g12978.t1 | SUPERFAMILY | SSF52151 | FabD/lysophospholipase-like | 506 | 788 | 5.75E-37 |
| 17 | g12978.t1 | SUPERFAMILY | SSF55048 | Probable ACP-binding domain of malonyl-CoA ACP transacylase | 631 | 688 | 7.72E-6 |
| 15 | g12978.t1 | SUPERFAMILY | SSF50129 | GroES-like | 1445 | 1555 | 4.27E-12 |
| 14 | g12978.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1520 | 1671 | 1.38E-32 |
| 13 | g12978.t1 | SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 1758 | 1955 | 3.45E-27 |
| 16 | g12978.t1 | SUPERFAMILY | SSF47336 | ACP-like | 1998 | 2061 | 9.29E-10 |
IUPRED3 score over 0.5 is predictive of a disordered region.
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0031177 | phosphopantetheine binding | MF |
| GO:0016746 | acyltransferase activity | MF |
| GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | MF |
| GO:0016740 | transferase activity | MF |
| GO:0006633 | fatty acid biosynthetic process | BP |
| GO:0016491 | oxidoreductase activity | MF |
This gene does not belong to any pathways.
TPM values are indicated as average +/- STDEV.
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed