General information for g13804.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Low-density lipoprotein receptor-related protein 2.
Parent gene
- The parent gene g13804 is located on chr_1: 32511222..32511857 (- strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_1 | g13804 | g13804.t1 | isoform | g13804.t1 | 32485760 | 32511222 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon1 | 32485760 | 32485968 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS1 | 32485760 | 32485968 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon2 | 32486028 | 32486254 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS2 | 32486028 | 32486254 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon3 | 32486316 | 32486565 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS3 | 32486316 | 32486565 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon4 | 32486625 | 32487907 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS4 | 32486625 | 32487907 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon5 | 32487967 | 32488101 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS5 | 32487967 | 32488101 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon6 | 32488157 | 32488529 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS6 | 32488157 | 32488529 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon7 | 32488587 | 32488715 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS7 | 32488587 | 32488715 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon8 | 32488776 | 32489102 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS8 | 32488776 | 32489102 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon9 | 32489166 | 32489333 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS9 | 32489166 | 32489333 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon10 | 32489395 | 32489517 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS10 | 32489395 | 32489517 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon11 | 32489577 | 32491055 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS11 | 32489577 | 32491055 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon12 | 32491112 | 32491519 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS12 | 32491112 | 32491519 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon13 | 32491574 | 32491707 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS13 | 32491574 | 32491707 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon14 | 32491763 | 32491873 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS14 | 32491763 | 32491873 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon15 | 32491933 | 32492312 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS15 | 32491933 | 32492312 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon16 | 32492372 | 32496417 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS16 | 32492372 | 32496417 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon17 | 32496476 | 32497408 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS17 | 32496476 | 32497408 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon18 | 32497473 | 32500016 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS18 | 32497473 | 32500016 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon19 | 32500087 | 32500365 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS19 | 32500087 | 32500365 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon20 | 32500425 | 32500691 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS20 | 32500425 | 32500691 |
| chr_1 | g13804 | g13804.t1 | exon | g13804.t1.exon21 | 32511087 | 32511222 |
| chr_1 | g13804 | g13804.t1 | cds | g13804.t1.CDS21 | 32511087 | 32511222 |
| chr_1 | g13804 | g13804.t1 | TSS | g13804.t1 | 32511915 | 32511915 |
| chr_1 | g13804 | g13804.t1 | TTS | g13804.t1 | NA | NA |
Sequences
>g13804.t1 Gene=g13804 Length=13941
ATGGGGTGGCCATTTGATGGCAAAACTCCCCAAAACATGGCACCAAAAGCAAGGTCACTA
CAATGGATTATTTTAAGTTCTTTCGTATTGTTCCTATGTATACAATTGTCATATGCTGAC
GACAGGGAAATAACAGATGCCTATACAAATTCATCATGTCCTACGGGAATGTTTCAGTGT
TCGAGTGGAAGTCCGCAGTGCATTCCACAAATTTGGGTGTGTAATTACCAAAAGGACTGT
GAAAAGGGCGAAGACGAATTTCAATCGTGTCCGCCACCAGACTGTGAAAATGGGCAATTT
AGTTGCGGTCGTTATGAGTTTAACAAAACTTATTGTTTACCACCGCACCATAAATGCGAT
ATGATTGTTGATTGTGTTGATGGCAGCGATGAAGCCGAATGCTCTTATCGCAAGTGTCAG
CCTGACGATATTCATTGTGGCGTGCCAAGTAATGCAACCGGTCTCAATCCAAATGGAAAG
CAGTCTGATCCATGTGTGCCACCTGAAAAAAAATGTGATGGCTATTTTGACTGCAGAAGT
GGTAAAGATGAAGAAGGTTGCACCGGCATTTCATGTCGTTTAGATCAATTCAGATGTGCC
AATGGCAATCGTTGTATCGATGCCTCATTAAAATGCAATCACAAAAATGATTGTGGTGAT
AATTCAGATGAAGCTGCTTGCAATTTCCCGCCATGCCATGGAGGCCAATTTCGATGTGCC
AATGCTTTATGCATTCCAGCAAATTTTCATTGCGACGGTTATCACGATTGTGCCGATGAA
AGTGACGAAGCTAATTGTACAGCAATTGCATGTCCCGACAATAAATTTCTTTGTCCAAAT
GGCGGTCCAAATCGATTACCAAAGTGTATTGGAAAATCACAACTATGCGATGGCAAAAGA
GATTGCGATGATGGTGCAGACGAGGAAACTGCTTGCTCAACTACATCATGTCCGGCTTTA
AGTTGTGAATACAAATGTGGTCCATCACTGACTGGCGGTCAATGTACTTGTCCAGTTGGA
AAAATGCTCTCTAATGATAACAAAACTTGCTCAGATCTCGATGAATGTATGGAATGGGGT
TATTGTGACCAACTTTGTACAAATAGTGATGGCTCATTTACATGTCATTGCGCACCAGGC
TACACATTAACTGATAAAACACATTGTGTGGCACCAAATGCTGGCAGTCTCGAACTTATT
TTTGCTCACGATCGTGCAGTTATCAGAATGTCACATCATGGTCAAGATTCAAGAATTATA
GCAAATGCAACAGGTGCAAGTGGTTTAGCTTTTCATTATGAGAGAAACTTGCTCTTCTGG
TCTGATACAAAGACGAGAAAAGTTCAGTCACAGCCACTCAATGATGGAGGATTTACAGGG
AGTGATTTGACTTTGCCTGGAACATGGTCACCTGGTGCATTGGCAATTGATTGGATTGGT
GATAAACTTTATGTTGCTGATCTTATTGGACAAAAGGTTGATGTTTTTGAACTTGATGGT
CGTTGGCATGCAGTAGTTCTTGGATCAAATTTAACAAGTCCGGCTGATATCGCACTCGAT
CCAACTTCTGGTCTAATGTTTGTTGCTGATGGCGGTCAAGTGCTTAGAGCGCATATGGAT
GGCACACATGTGAGATCGATTGTATCAGAAGCAGCATATAAAGCATCTGGAGTAACAACA
GATGTAATTGCAAAAAGAATTTTCTGGTGTGATTCACTTTTGGATTATATTGAGTCAGTA
AATTATGATGGTCAACATCGTGTGATGGTTCTACGTGGTCAACAAGTTCCAAGTCCATCA
CGTTTAGCTATTTTTGAAAATCGAGTTTATTGGACGGACGCAACAAAGCAAGGTATCATG
TCAGTTGACAAATTTCAAGGTTCAACGAGCATCGAGTCAATATTCAAGGCCAAAGACATT
CGTGATCCTCGTGCAATTTTAACAGTGCATAAATTAAGTCAACCAAAAGCTCTCAATCCA
TGCGGTTCAAATAATGGTGGTTGTTCACAGCTTTGCATTGTCACGGCCATTGTTGGATCT
GATGATAAATCTGTGCCATCAAGTTTAGGTTATCGTTGTGCTTGTCATACTGGTTGGCAA
TTGGCAACAGATTTAAGAAATTGTTACTTGGTTGAAGAATTTTTGATGTATTCACAACAA
AGATTTATTAAAGGAAAAGTTCTTGATCCAGCCATTGAAGGTTTTAGTGATGCAATTCTT
CCTGTAGTTTCACGAAGAGCACGTTTTGTTGGCTTAGACTTTGATTCACGTGAAGAACAC
ATTTATTACTCTGATGTGCTTCAGGATGTAATTTATCGTGTTCATAGAAATGGAACAGGC
AGGGAAATTGTATTAGCATCGCAAAATGAAGGGGTTGAAGGTCTTGCTGTTGATTGGGCA
TCGAAAAATCTTTATTACATTGACAGCCGTAAAGGAACATTGAATGTATTGTCAACAAAG
AATGTAACACATCGTAGAACATTATTGAAGAATTTAAAAAGACCACGTGCAATTGTCGTT
CATCCAAATCGTGGTTTCATTTATTTCTCAGAATGGGATCGACCAGCTAATATTACACGT
GCAAATTCTGATGGAACAAATCTTTTAGTCTTTAAAAATGTAACTCTAGGTTGGCCAAAT
GGTCTCAGTATTGATTTCACAGCTGATCGTGTTTATTGGTGTGATGCTCTTTTGGACCAT
GTTCAACATTCGAATCTCGATGGATCAGATATCAAAACTGTCAATTCACGACTCATAAGA
CATCCATTTTCAATTGTCATTCATAATGATTGGATGTATATTACTGATTGGCGTTTAGAT
GCAATTGTGCGGTTAAATAAATTGACGGGTGAACAAGAAGAAATTATGGTGAGAGAACCA
CAAACCAATCGACTTTATGGTGTGAAAGTTTACAGTAGAAAGACTCAGACTATTGCTAAT
TTGCATCCATGCTCATATAATAATGGAGGTTGTGAGAAAATGTGCTTTGCTATTCCTGAT
AATGTTACAAATGTTTTGCACGCAAAATGTGCTTGTCCTTATGGCGAAAGACTCAATGAT
GATGAAAAAACTTGTATGTTGGACCCAAATTCAGAGCCACCAGTTCAAGCTTGTCCAAAT
TCATGGGATTTCACATGTAGAAATCAAAGATGTATTCCAAAATCATGGATTTGTGATGGT
GATGATGATTGTTTGGATAACAGTGATGAAGAACAAAATTGTACAAAACCAACATGCGGA
TCAAATGAATTCCAATGTAAATCAGGCAGATGCATTCCATTAAACTTTAGATGTGATCAA
GAAAATGATTGTGGTGATCATTCTGATGAATTTGAATGTGGAAATGTCACTTGTGCTGCA
TCACAATTTGCATGTGAAAATGGAAGATGTATTCCAAATATTTGGAAATGTGATTCAGAA
AATGATTGTGGTGATGGCTCAGATGAAGGAGATTTTTGTGCTGAAAAAACTTGTGCTTAT
TTCCAATTTACTTGTCCACGAACTGGTCATTGTATTCCTCAATCTTGGGTTTGTGATGGT
GATGATGATTGTTTTGATAAACAAGATGAAAAAGATTGTCCGCCAATAACTTGCTCAGCG
AATCAATTCAAATGTGCAGACTTGCGGCAATGTGTTGAAGAAAATTATAAATGTGATGGA
ATTCCTGATTGTAATGATGGCTCAGATGAACTTGGTTGTCCATCAGTTGAACCAAATCAA
TGTAATCAAGAAAAGCATTTCCGTTGCAAGACTTCAGGCATTTGTATTCCAATTGCATGG
CATTGTGATGGCTCAAATGATTGCGATGATCATTCAGATGAACAAGAATGCGGTTCAATT
ACATGCCCGAATAATTTTTTCAAATGTAAAAATGGAAAATGTGTATTTAAAGCTTATGTC
TGTAATGGTGTTGATGATTGTGGTGACAATTCTGATGAATCACATGAACATGCTTGCGTT
CCACCACCATTTAGATGTCCGATTGGTCAATGGCAATGTCCTGGTGTTCATGAAAGATGT
GTCAATTTAACTTCAGTTTGTGATGGCTCACCTGATTGTCCAAATGGCTCAGATGAAGGC
GAAGGATGTGATTTAGCTGAATGTCAACATCAAAATGGTCGTTGTACTAATGGCTGTCAA
AAAACACCTAATGGAGCTTTATGCATTTGTCCACCTGGTGAAGAATTATCAGAAGATGGT
TACACGTGTAAAGATGTAAATGAATGCGATCCACCAGGTTTGTGCTCACAACGTTGTGTC
AATACTAAAGGTTCATACTTCTGCTCCTGTACACCTGGTTATGATATTTTGCCTGATCAT
CATCATTGCAAAGCTGTCAATCATTCTGCAGCATTCTTAATCATTTCAAATCGTCATTCG
ATTCTTGTTGCTGATTTAAAAGAGCAAGGACTTGAACGAGTTCCAATTATTGTTGAGAAT
GTTGTTGCAACAACTTCGAATATGCACACAGGCACAATATTTTGGTCTGATATGAAATTG
AAGAAAATTTCACGACTTGATAGAGGAATGGAACCAGTTGACATAATCACTACTGGTCTA
GATCTTGTTGAAGGCTTGGCATATGATTGGATAGGCAAAAATATTTATTGGCTTGACAGT
AAACTTAATACAATTGAAGTTTCATCAGAAAATGGCACAAATCGAATGGTTTTAGTTCGT
GAAAATATTACACAACCACGTGGAATGTGTCTTGATCCAACACCTGAGAACCGTTGGCTT
TTCTGGAGTGATTGGGGTGAAAATCCAAGAATTGAAAGAGTTGGTATGGATGGAACATTG
CGTGAGACAATTATCAGCAACAAAATTTATTGGCCAAACGGTCTCACACTCGATATTGCT
ACAAAACGAGTTTATTTTGCTGACTCTAAGCTTGACTTTATCGACTTTTGCTACTATAAC
GGAACAGGTCGTCAACAGGTTCTGGCAGGAAGTCATTATCTGCTACATCCTCATTCATTG
TCACTCTTTGAAGATACTCTCTATTGGACTGACCGTCAACTTAATCGAGTCTTATCAGCA
CATAAATTTAAAGGCACAAATCAAACTGTCGTTTCACATTTAATTTCTCAACCTTTATCA
ATTCATGTTCATCATAAAGTTTTGCAGCCAATGTTTGAAAATCCATGTGAAACTGCTGAA
TATAAATGTCAACATATTTGTCTTTTGAGTCCATCAGATAAAAAAGGATATGTATGCAAA
TGTAGACCAGGTTACAAACCAACAGGACAAAATCAATGGAGATGTATTGAAGAAGAAAAT
CCTTATCTCATGGTACTTAAGGGCAATCAAATTGTTGATATTCCACTTAGCAATAACAAC
GCTCGTGCTGGTTCACTAAATCCTGTTATTGGAATTGAAAATGGAATTGGTTTAGAATAT
GATAGAAAAGGTGAACAAATTTTCTGGCTTCAAGGCAAAGAGGATGATGATGAAAATTGC
ACTATTTATGTTACACCTTATGGTGGTGGAAATAAGACAGAATTTTTGCCAGAATCAGGA
GTCGTTGGTGCACCTTATGCAATCGCTTTTGATTGGATTGGCCGAATTCTTTTCATTGGC
AATCGATTGGCTAGCAATATTGAAGCAATTAAAGTTGAAGGCAAAACTCGTTATCGTGCA
ATAATTTTATCAAATAATGGCGAAAGAGAATCAGTAGCTAAGCCTAAAGCACTCGCATTA
GATCCAAGTGAAGGCAAAATTTTCTGGACTGATGAAGGTGGTTATGGAGTGCCAGCCAAA
GTCGGTCGTGTCAATATGGACGGATCTAATCCAACGATTCTTGTTGATTTGATTGAAAAT
CCTGAGGCAATTACTGTTGATGTTGATAAAAAGTTTGTTTATTATAGTACACGGCATCCA
CCTGGTATTCATTCAATGCGCTATGATGGTACTGAAAAGAATGAAATTCTTAGTGAACAA
AATGATATTTCATATCCAAAAGCTCTTGGAATTCTTGAATCACGACTTTATTATCTCGAT
CCAATTTATGAGAAAATTATTCGTGTTGATTTGCCAAGTGGTGACAATCCAAAGGTCATT
ATTGACAATGAAGCTGATTTGAAAAATATGATTGTATTTAGAAAGAGAGCAATTCCAAAT
CATCCATGCATGACACTTAATGGAGGTTGTGAACATTTCTGTTTCCCAGCTGAAGGTGAA
GCACGCACATGTGCTTGCGGAATTGGTTATAAGAAAGAAAATGAAATTTCATGCACGCCA
TTTAAATCATTTGCTGTTGTTTCACAGCTTGATGTTGCTCGTGGATATTCATTGAAAGAC
AGCTCAGAAGCAATGGTTCCAATCGCTGGGCCAGGTCATCACATTCTTCATGTTGATGTT
GTTTACAGAGATCAATGGATTTATTGGGTTGAATTCAATCGAGGACATTGGAATGGAATT
TTCAGATCAAGACCAAACGGTACAGAAATTCAACATATTGTTAAAGATGGAATTGGCAGC
AATACAATTCGTGGATTGGCAATTGATTGGGTAGCTGGAAACCTTTACTTTACAAATGTC
TTTCCACATGAAAATTATGTTGAAGTTTGTTGGCTTGATGGAAGTAACAGAAAAATTATT
GTAAAAACAACCACTGATGCACCACGTGAACTTGCAGTTAATCCAATTAAAAGACTCCTT
TATTGGATTGATTATGGTCAATATCCACGAATTGGAAAATCATATTTAGATGGATCAAAT
TGGATGCCGGTTGTTACTTCAGGAATTTCGAATCCACGTGATTTGACTGTCGACATGTTG
ACTCATGATGTTTATTGGGTTGATTCAAAACTTGATATGATTCAGAAAATTTCATATACT
GGTGGAAATCGACAAGTTATCAGAAGAAATTTACCAAATCCAATGGGAATTGCTATTCAT
GTTAATGATGTTTATTGGGTTGATAGAAATCTCATGTCAGTTTTTAAAGCATCCAAATTT
CCAGGCAACACAACTGTGCCAGATAAATTGAGAACAAATTTGCAAAAACTCCGTGACATT
GTAATTTATGACTCAAGCAATCAACCAGCTGATGAGAATAATCCATGTTATAAACTCGGC
AATGGCGGTTGTGATCAATTGTGCTTTAGTTTCCCACCAGACACTTCATCCATTGGTCGT
TTGAGTTTCAAATGTGATTGTGCTACTGGAAAACTGACATCTGATGGACGACGTTGTGAT
ACTGAAAATGAATTTTTAGTTTTCACAACTCGTACTGAAATTCGTGCAATTGAACTTGAT
CCAAAGTCTACAAATGTTCCTTTTAAACCTGTCACAAATCTCACAAATGTTGTTGGCCTT
GATTTTGATTATAGTGACAATAAACTTTTCTTCACACAAATCAGACCATGGTCAAAGATT
GGTTGGATTAATGCTGATATTCCAGAATCAAGTGCTATAAATACAATCATCAATCGTGGC
ATTAATCCTGAAGGAATTGCGTATGATTGGACACAGAAGAAAATTTACTGGACTGACAGT
GCTAATGTTTCAATTTTCGCAATGAATCTCGATGGATCAGATTTAGTCATGATTTCAAGA
GTTGAAAGACCTCGTGCTATTGTTCTTGATCCCTGCAATGGCACACTTTATTACACTGAT
TGGGGAAGATTTGGTACGACAGGAAAAATTTTCAGAACAACAATGGCTGGATCATTGAAG
AAGGCAATTATTGATAAAGATCTATCACAACCAAGTGGTTTAGCTATTGATTATGAAGAA
AGAATGCTTTATTGGACAGATGCAGTTCGTGAAAAGATTGAAAGATCAACATTGGATGGA
AAGAATCGAGAAATTTTAGTGACAGCGACAATTTATCCATTTGCAATTACAGTTTTTAGA
AATTACATTTATTGGACAGATTTGCAACTTCGTGGAGTTTATAGAGCTGAGAAACATACT
GGTGCAAATATGATTGAAATGGTTAAGAGGCTCGAAGATTCACCAAGAGATATTCATATC
TATAGTAAAACAAGACAAGCATGTCAAGTAAATCCTTGCAATCAAAATAATGGTGGATGT
GCACAAAGTTGTCATCCAGGATTGAATGGAAAAGCTGAATGCAAATGCGATGATTCAACT
AAACCAGTGAATGAAGGAAGAATGTGTGCACCAAAGAATCATACATGTGATGCAAGCAAA
TTCTATTGTAAAAATGGAAAATGTATTTCTCGAATGTGGGCTTGTGATGGTGATAATGAT
TGTGGTGATAATTCTGATGAAGATACAAATTACTGCGCATTCCACTCTTGTTCGCCAAAT
GAGTTCCGTTGTAACAATGGAAGATGTATTTTCAAAACATGGAAATGTGATCATGAAAAT
GATTGCAAAGATGGATCAGATGAACTCAATTGTCAATATCCACCATGTGCTGATGGCGAA
TTTACTTGCTTAAATGGACGCTGTATTCCACAAGCTCAAGTTTGCAATGGAGTAAATGAC
TGCAAGGATAATGCAACATCAGATGAAACCCATGAAAGATGTCCAACTAACACAACTTGT
CCAGCAAATCACCTAAAATGTGCAAAGACAAACATTTGTGTTGAACCATATTGGTTGTGT
GATGGTGATAATGATTGCGGTGATAATTCTGATGAAGATGCTATCCATTGTGCTCAAAGA
ACTTGTCCACAAAATTCATTCAGATGTCCAAATCATCGTTGTATTCCAGCTACATGGTAT
TGTGATGGTGATGACGATTGCGGTGATGGAGCTGATGAACCACCAGAATATTGCAAATCT
GAAGGAAGAACATGCTTTGGTGATCTTTTCACTTGTGATAATGGCAATTGCATTCCTAGA
ATTTATATTTGCGATGGTGATAATGATTGTCTCGATAACAGCGATGAAGATAATAGACAT
CAATGCAATGATAGAAAATGTGATCCAGAAACTGAATTTACTTGTGAAGAGAACAAACAA
TGGGGCAGATCACAATGTATACCCAAGAAATGGCTTTGTGATGGCGATCCTGATTGCGTT
GATGGTGCTGATGAAAATACAACCCTTCACAATTGTCCAACTCCTCAACCTTGCTCAGAA
GATCAATTTACGTGTGAGAATGGAAGATGTATCAATAAAGGATGGCTTTGTGATCATGAT
AATGATTGTGGTGATGGCTCAGATGAAGGCAAATTCTGTAATTCACAATATAAAACTTGC
TCAACTCAGGAATTTACATGTCAAAACTTTAAATGTATCAGAAATCAATATCGATGCGAT
GGAGAAGATGATTGTGGTGATAGATCAGATGAAGTTGATTGCAAGAAAGAAAATTCGACA
TGTCCAAATGGTCAATTCCAGTGTAATAATGGAAATTGCATAGATTACACACTTGTTTGT
AATAAAGTTTCTGACTGTTCTGATGATTCCGATGAACCATTGCACTGTAATGTCGATGAA
TGTGCCAAGGTTGAAACAAATCAATGTGGACATAAATGTGTTGACACTCTCACGAGCTAT
TATTGTGATTGTAATCAAGGTTATAAATTGTTAGCTGATGGAAAAGCTTGTGCTGATATC
GATGAGTGCATTGAAACACCAGGTGTTTGTTCACAGCATTGCTCAAATACACCAGGCGGT
TATTATTGTAAATGTGATGAACGCTATTATGAACGTCAAAATGATGAGCACACGTGCAAG
AGAAAGGATAAGGAAACACCTTGGATTGTGTTTACAAATAAATATTATGTGCGCAATATT
TCAGTTGATGGATCAATTTATAATGTCATGCATCAAGACTTGATGAATGTTGTTGCAGTT
GATTTTGATTATAAAGAACAGAAAATGTATTTCTGTGATGTTACAGCAAAGACAATTTTC
AGATCTGATTATGGAGTTGAAACTGATCAAAAAATACCTAAAGAGCCTGTCGTTAAACAT
GATTCACATGGTTTAGAAGGTTTAGCTGTCGATTGGGTTGGTAGAAAACTATATTGGCTT
GATAGACATTCGAAAAATCTTGATGTCTCAGAATTAGATGGAACAAATAGAAAAACTTTG
AGAAGTGGAGTTGTTGATCCTCGTGCTGTCGTTGTACATCCTGGAATTGGTTATTTATAC
TTTACATCATGGCATTTGCAAGCTTATATCGCTAAAATGGGCATGGATGGCTCTAATTTC
AGTAGAATACTCACATGGGAGCAAGACATTGCTTGGCCAAATGCATTGACAATTGATTAT
TTTACTGACAGAATTTATTGGGCTGATGCTCATTTGGATTATATTGCATTCACTGATCTT
GAAGGACGTAATCGTCATGTTGTGATCTCAGGTGCAAAAGTTCCACACGTTTTCGCACTT
ACAGTCTTTGATGATTTCCTTTATTGGACTGATTGGAATTTAAAAGCAATTTTACGTGCT
AATAAATTTACTGGAAAAGATTTACAAACTTTAAGAAACACAACTCATCGACCTTATGAC
ATTCACATTAATCATCGTTTAAGACAAATTCCATACCCAAATCCATGTGGTGAAACAAAT
GGAGGTTGCAGTCATTTGTGTTTGCTTTCGCCACCTCATGAATCAAGCTATTTGAACATT
GAAGGGTATATTGAAGAGGGAGCTCCTGGTTATAAATGTGCTTGTCCAAATCAATTTTAC
CTTGCAAGAGATGCAAAGACTTGCATTGCTAATTATACAGCTGGTCAACATCGATGCGGT
GGTGCTGATGAAAAATGTATTCCGTGGTTCTGGAAATGTGATGGAGAGCCTGATTGTAAA
GATAAATCTGATGAACCAGCTTCATGTCCAGCACGTCATTGTCGTGCAGGAACTTTCCAA
TGTAAGAACAACAACTGCACACCATCAGCTACTATTTGTGATGGAAATGATGATTGTGGT
GATGGAAGTGATGAACAAAATTGTGATTTGCCATGTCCAGAAAGTGATTTTAAATGCAAG
TCAAGTGGTCGTTGTATTTTAGAAAGTTGGAGATGTGATGGTGATGCAGATTGTAAAGAT
GGCAGTGATGAAGATCCAGCTGTTTGTCATAAGAGAGCTTGTGACCCAGAAACTGAATTT
TCTTGCAAGAATGGTCGTTGTATACCAAAATTATGGATGTGTGACTTTGATAATGATTGC
GGTGATGATTCTGATGAACCAGCATATATGTGTCGTCAAAGAAATTGCACAAACGGATGG
AGAAGATGTCCAGGTCAATCAAATTATCGTTGCATTCCAAAATGGCTATTCTGTGATGGA
AAAGACGATTGTCGTGATAACAGCGATGAATTGCCAGAAAATTGTCCAACATGTCAAGCT
GATACTGACTTTAAGTGCAAAAATAATCGCTGTATTCCTAAACAATGGACTTGCGATTTT
GCTGATGATTGTGGTGACGGTTCTGATGAAGCAGAAGCACTTTGCAAAGGAAGATATCGT
GAATGTTCAGAATCAGAATTCCATTGTGATAATGGCAAATGTATTTCATCAAGATGGAGA
TGCGATCACGAAGATGATTGTGGTGATGGCTCAGATGAGCTTCATTGTGAAGGTTTCCAA
TGCAAGAACGGAACATTCCAGTGTAAATCAGGTCATTGTATTGCTGCTTACTTCCGTTGT
GATGGTGATCGTGATTGTCGTGACATGTCAGATGAAATCGATTGTCCACCAAAATATCCA
GGAGGAAGATACTGTCCAGAAACAAGGTTCCAGTGTAACAATCACTTCTGTGTTTTCAAT
ACTGATGTTTGTGATGGTGCAGACGACTGTGGTGATAACTCAGACGAAGCCCCATCAGTT
TGCTCTAATTTGACTTGCGATTTGACTAAGAAATTCCAATGTGATAATAAGAAATGCATT
CCAAGATTCCAAATTTGTGATGGAATTGATAACTGCGGAGATGGATCAGATGAAAATAAT
CACACGCTTTGTGGAACGAAAATAAAACCATGTGATCCAAACACTCAATACACTTGTGCC
AATAAGAAATGCGTTGAAAGATCACAAGTTTGTGATTTCAGTGACGATTGTGGAGATAAA
TCAGATGAACTTGGTTGTCATCATACAAGCACATGCACAGAATTGACAAGAGGCGGATGT
GAACATCATTGTACAAACCTTACAGATGGTGGTTACATTTGCAGTTGCTATCAAGGCTAT
ATCATTGATGCAACAAATAAGAAGAAATGTATTGATGTCGATGAATGTGCAACAGGTACA
AGTAAATGTTCACAAATTTGTAACAATCTCAATGGAACATACTCATGCTCTTGTACAAAT
GGCTTCAAACTTGTCGATTCGATGGCTGGTATTTGCAAAGCTGAAAAAGATGAGACAACT
GTCATTTTTACTACTGGCACAAATATTCGTGCATTTAATCTCAAGGAAAATAAAGAGTTT
GATGTGATTTCATCTGAAAAACGAATAGAATCAATTGATTATGATCCAAAGAAACAAATG
GTATTTTGGGCTGATAGCAATGATCGTACAATTAAGAGATCTTATATGGTCAATGCAATG
GATGGTCAAGCTAAAATTGGTTTCGCTCAAGATCTAAATATGAAAGGAAATTCAAAACCT
ACAGCAGTTGCTGTAGATTGGATTGCGGAAAATCTTTATTGGACTGAAACTGACAGAACA
GGAAGCAAACCACGTGGTCGAGTGATGGTTGCTAAAACTGATGGACGTTATCGTCGTGCT
TTAGTTAATAATGGACTAGAAATTCCAACATCAATTGCAGTTGATCCTCAATTAGGAAGA
CTGTATTGGTCAGATGCAGGTTCAGCACCAAAAATTGAAGTTTCATGGATGGATGGTGGT
AGAAGAAAACCTTTAATTGTTGATGGAATCCGGCATCCAGCTGGAGTCACAATTGATTAC
GATCAAGAACATCGAATTTATTGGGTTGACACTAAGCTTAATACAATCGAATCAGTTAAA
CCTGATGGAACTTTAAGAACAATTGTCGTTCGTGGTGAACAACTACGTCATCCAATTTCA
TTAGATATTTTTGAATCAAGTCTTTATTGGGTTTCACGTGACACTGGTGATCTCATTAAA
CAAGATAAATTTGGTCGTGGTGTTCAAGTTGTAATTCAACATGACATTGCTAATCCAGCT
GGTGTTAAAATTTATCATGAAAATCGATACAATACATCATTGAAAAATCCATGCTTTAAG
AGCACTTGCTCACATCTTTGTCTTCTTGTACCTGGTGGATGGCGTTGTGCTTGTCCAGAT
AATTCAGTTCAACCACAAAATCATAGAAGTACAGCTGAAGTTGTTTGTGATGCTGTTGCT
GAAAGAGAACGTCCTTTACCAAGAGTTTGCAAATGTCAAAATGGTGGTTATTGCAAAGAA
GATGAAAATGGAGATGTTGTTTGTGACTGTCAACCAGATTTCTTAGGCAAACACTGTGAG
AAGTTCGTAGGAGTGTCACACACAGCAGGCGGAAATTCAACTGCTGCCGTTCTCATTCCA
ATTTTGATCTTGGCACTTATGGGTGCGGCTGTTGGTTCGTGGTTTGTCATCAAAAAACGA
CCATTTGGCAAAGCAACATTAGGCTTGTCATCATCACAAAGTGTTTCATTTAGACATGGA
ACAAATGTGGAATTTAATTCGCCAGGCTTTTCAGCTGGCTCACCTACTTCACCATCACTC
GCAACTGATGAAATTCCTCCAATGGACTCATACAATCTTGAGACTTTGAGTAATAAGAAT
CGAGATTTTTCAAATCCAATGTATGATGCAGTTCAATCAGATTCTCATATGGCACGAATA
TATGATGTGCCGCCACCCGAATCAAGTCCAAAAGATAGTGCCCCAGTAGAACCAGGCTCG
GCGATAATTGCGCCAAGCAGTATAGTTCATCGAACATCACCTCAATTACAAATAAGAAAA
CCACGTGAGCTCGATCCAACGTCTGTTGATACAGGCAAGGATACGCAAGCACTCGTCGAA
GAAGACAAATCTGAATGCTGA
>g13804.t1 Gene=g13804 Length=4646
MGWPFDGKTPQNMAPKARSLQWIILSSFVLFLCIQLSYADDREITDAYTNSSCPTGMFQC
SSGSPQCIPQIWVCNYQKDCEKGEDEFQSCPPPDCENGQFSCGRYEFNKTYCLPPHHKCD
MIVDCVDGSDEAECSYRKCQPDDIHCGVPSNATGLNPNGKQSDPCVPPEKKCDGYFDCRS
GKDEEGCTGISCRLDQFRCANGNRCIDASLKCNHKNDCGDNSDEAACNFPPCHGGQFRCA
NALCIPANFHCDGYHDCADESDEANCTAIACPDNKFLCPNGGPNRLPKCIGKSQLCDGKR
DCDDGADEETACSTTSCPALSCEYKCGPSLTGGQCTCPVGKMLSNDNKTCSDLDECMEWG
YCDQLCTNSDGSFTCHCAPGYTLTDKTHCVAPNAGSLELIFAHDRAVIRMSHHGQDSRII
ANATGASGLAFHYERNLLFWSDTKTRKVQSQPLNDGGFTGSDLTLPGTWSPGALAIDWIG
DKLYVADLIGQKVDVFELDGRWHAVVLGSNLTSPADIALDPTSGLMFVADGGQVLRAHMD
GTHVRSIVSEAAYKASGVTTDVIAKRIFWCDSLLDYIESVNYDGQHRVMVLRGQQVPSPS
RLAIFENRVYWTDATKQGIMSVDKFQGSTSIESIFKAKDIRDPRAILTVHKLSQPKALNP
CGSNNGGCSQLCIVTAIVGSDDKSVPSSLGYRCACHTGWQLATDLRNCYLVEEFLMYSQQ
RFIKGKVLDPAIEGFSDAILPVVSRRARFVGLDFDSREEHIYYSDVLQDVIYRVHRNGTG
REIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTKNVTHRRTLLKNLKRPRAIVV
HPNRGFIYFSEWDRPANITRANSDGTNLLVFKNVTLGWPNGLSIDFTADRVYWCDALLDH
VQHSNLDGSDIKTVNSRLIRHPFSIVIHNDWMYITDWRLDAIVRLNKLTGEQEEIMVREP
QTNRLYGVKVYSRKTQTIANLHPCSYNNGGCEKMCFAIPDNVTNVLHAKCACPYGERLND
DEKTCMLDPNSEPPVQACPNSWDFTCRNQRCIPKSWICDGDDDCLDNSDEEQNCTKPTCG
SNEFQCKSGRCIPLNFRCDQENDCGDHSDEFECGNVTCAASQFACENGRCIPNIWKCDSE
NDCGDGSDEGDFCAEKTCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPITCSA
NQFKCADLRQCVEENYKCDGIPDCNDGSDELGCPSVEPNQCNQEKHFRCKTSGICIPIAW
HCDGSNDCDDHSDEQECGSITCPNNFFKCKNGKCVFKAYVCNGVDDCGDNSDESHEHACV
PPPFRCPIGQWQCPGVHERCVNLTSVCDGSPDCPNGSDEGEGCDLAECQHQNGRCTNGCQ
KTPNGALCICPPGEELSEDGYTCKDVNECDPPGLCSQRCVNTKGSYFCSCTPGYDILPDH
HHCKAVNHSAAFLIISNRHSILVADLKEQGLERVPIIVENVVATTSNMHTGTIFWSDMKL
KKISRLDRGMEPVDIITTGLDLVEGLAYDWIGKNIYWLDSKLNTIEVSSENGTNRMVLVR
ENITQPRGMCLDPTPENRWLFWSDWGENPRIERVGMDGTLRETIISNKIYWPNGLTLDIA
TKRVYFADSKLDFIDFCYYNGTGRQQVLAGSHYLLHPHSLSLFEDTLYWTDRQLNRVLSA
HKFKGTNQTVVSHLISQPLSIHVHHKVLQPMFENPCETAEYKCQHICLLSPSDKKGYVCK
CRPGYKPTGQNQWRCIEEENPYLMVLKGNQIVDIPLSNNNARAGSLNPVIGIENGIGLEY
DRKGEQIFWLQGKEDDDENCTIYVTPYGGGNKTEFLPESGVVGAPYAIAFDWIGRILFIG
NRLASNIEAIKVEGKTRYRAIILSNNGERESVAKPKALALDPSEGKIFWTDEGGYGVPAK
VGRVNMDGSNPTILVDLIENPEAITVDVDKKFVYYSTRHPPGIHSMRYDGTEKNEILSEQ
NDISYPKALGILESRLYYLDPIYEKIIRVDLPSGDNPKVIIDNEADLKNMIVFRKRAIPN
HPCMTLNGGCEHFCFPAEGEARTCACGIGYKKENEISCTPFKSFAVVSQLDVARGYSLKD
SSEAMVPIAGPGHHILHVDVVYRDQWIYWVEFNRGHWNGIFRSRPNGTEIQHIVKDGIGS
NTIRGLAIDWVAGNLYFTNVFPHENYVEVCWLDGSNRKIIVKTTTDAPRELAVNPIKRLL
YWIDYGQYPRIGKSYLDGSNWMPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKISYT
GGNRQVIRRNLPNPMGIAIHVNDVYWVDRNLMSVFKASKFPGNTTVPDKLRTNLQKLRDI
VIYDSSNQPADENNPCYKLGNGGCDQLCFSFPPDTSSIGRLSFKCDCATGKLTSDGRRCD
TENEFLVFTTRTEIRAIELDPKSTNVPFKPVTNLTNVVGLDFDYSDNKLFFTQIRPWSKI
GWINADIPESSAINTIINRGINPEGIAYDWTQKKIYWTDSANVSIFAMNLDGSDLVMISR
VERPRAIVLDPCNGTLYYTDWGRFGTTGKIFRTTMAGSLKKAIIDKDLSQPSGLAIDYEE
RMLYWTDAVREKIERSTLDGKNREILVTATIYPFAITVFRNYIYWTDLQLRGVYRAEKHT
GANMIEMVKRLEDSPRDIHIYSKTRQACQVNPCNQNNGGCAQSCHPGLNGKAECKCDDST
KPVNEGRMCAPKNHTCDASKFYCKNGKCISRMWACDGDNDCGDNSDEDTNYCAFHSCSPN
EFRCNNGRCIFKTWKCDHENDCKDGSDELNCQYPPCADGEFTCLNGRCIPQAQVCNGVND
CKDNATSDETHERCPTNTTCPANHLKCAKTNICVEPYWLCDGDNDCGDNSDEDAIHCAQR
TCPQNSFRCPNHRCIPATWYCDGDDDCGDGADEPPEYCKSEGRTCFGDLFTCDNGNCIPR
IYICDGDNDCLDNSDEDNRHQCNDRKCDPETEFTCEENKQWGRSQCIPKKWLCDGDPDCV
DGADENTTLHNCPTPQPCSEDQFTCENGRCINKGWLCDHDNDCGDGSDEGKFCNSQYKTC
STQEFTCQNFKCIRNQYRCDGEDDCGDRSDEVDCKKENSTCPNGQFQCNNGNCIDYTLVC
NKVSDCSDDSDEPLHCNVDECAKVETNQCGHKCVDTLTSYYCDCNQGYKLLADGKACADI
DECIETPGVCSQHCSNTPGGYYCKCDERYYERQNDEHTCKRKDKETPWIVFTNKYYVRNI
SVDGSIYNVMHQDLMNVVAVDFDYKEQKMYFCDVTAKTIFRSDYGVETDQKIPKEPVVKH
DSHGLEGLAVDWVGRKLYWLDRHSKNLDVSELDGTNRKTLRSGVVDPRAVVVHPGIGYLY
FTSWHLQAYIAKMGMDGSNFSRILTWEQDIAWPNALTIDYFTDRIYWADAHLDYIAFTDL
EGRNRHVVISGAKVPHVFALTVFDDFLYWTDWNLKAILRANKFTGKDLQTLRNTTHRPYD
IHINHRLRQIPYPNPCGETNGGCSHLCLLSPPHESSYLNIEGYIEEGAPGYKCACPNQFY
LARDAKTCIANYTAGQHRCGGADEKCIPWFWKCDGEPDCKDKSDEPASCPARHCRAGTFQ
CKNNNCTPSATICDGNDDCGDGSDEQNCDLPCPESDFKCKSSGRCILESWRCDGDADCKD
GSDEDPAVCHKRACDPETEFSCKNGRCIPKLWMCDFDNDCGDDSDEPAYMCRQRNCTNGW
RRCPGQSNYRCIPKWLFCDGKDDCRDNSDELPENCPTCQADTDFKCKNNRCIPKQWTCDF
ADDCGDGSDEAEALCKGRYRECSESEFHCDNGKCISSRWRCDHEDDCGDGSDELHCEGFQ
CKNGTFQCKSGHCIAAYFRCDGDRDCRDMSDEIDCPPKYPGGRYCPETRFQCNNHFCVFN
TDVCDGADDCGDNSDEAPSVCSNLTCDLTKKFQCDNKKCIPRFQICDGIDNCGDGSDENN
HTLCGTKIKPCDPNTQYTCANKKCVERSQVCDFSDDCGDKSDELGCHHTSTCTELTRGGC
EHHCTNLTDGGYICSCYQGYIIDATNKKKCIDVDECATGTSKCSQICNNLNGTYSCSCTN
GFKLVDSMAGICKAEKDETTVIFTTGTNIRAFNLKENKEFDVISSEKRIESIDYDPKKQM
VFWADSNDRTIKRSYMVNAMDGQAKIGFAQDLNMKGNSKPTAVAVDWIAENLYWTETDRT
GSKPRGRVMVAKTDGRYRRALVNNGLEIPTSIAVDPQLGRLYWSDAGSAPKIEVSWMDGG
RRKPLIVDGIRHPAGVTIDYDQEHRIYWVDTKLNTIESVKPDGTLRTIVVRGEQLRHPIS
LDIFESSLYWVSRDTGDLIKQDKFGRGVQVVIQHDIANPAGVKIYHENRYNTSLKNPCFK
STCSHLCLLVPGGWRCACPDNSVQPQNHRSTAEVVCDAVAERERPLPRVCKCQNGGYCKE
DENGDVVCDCQPDFLGKHCEKFVGVSHTAGGNSTAAVLIPILILALMGAAVGSWFVIKKR
PFGKATLGLSSSQSVSFRHGTNVEFNSPGFSAGSPTSPSLATDEIPPMDSYNLETLSNKN
RDFSNPMYDAVQSDSHMARIYDVPPPESSPKDSAPVEPGSAIIAPSSIVHRTSPQLQIRK
PRELDPTSVDTGKDTQALVEEDKSEC
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 220 | g13804.t1 | CDD | cd00112 | LDLa | 53 | 86 | 7.64113E-6 |
| 217 | g13804.t1 | CDD | cd00112 | LDLa | 95 | 134 | 5.49756E-5 |
| 219 | g13804.t1 | CDD | cd00112 | LDLa | 192 | 227 | 7.20231E-9 |
| 221 | g13804.t1 | CDD | cd00112 | LDLa | 232 | 266 | 2.62886E-9 |
| 210 | g13804.t1 | CDD | cd00112 | LDLa | 271 | 309 | 2.92152E-6 |
| 224 | g13804.t1 | CDD | cd00054 | EGF_CA | 352 | 384 | 3.75402E-4 |
| 212 | g13804.t1 | CDD | cd00112 | LDLa | 1044 | 1074 | 7.4169E-9 |
| 190 | g13804.t1 | CDD | cd00112 | LDLa | 1079 | 1113 | 5.01082E-11 |
| 199 | g13804.t1 | CDD | cd00112 | LDLa | 1118 | 1151 | 5.44314E-10 |
| 203 | g13804.t1 | CDD | cd00112 | LDLa | 1158 | 1193 | 4.03384E-8 |
| 193 | g13804.t1 | CDD | cd00112 | LDLa | 1198 | 1233 | 4.44883E-8 |
| 200 | g13804.t1 | CDD | cd00112 | LDLa | 1243 | 1277 | 1.54336E-7 |
| 206 | g13804.t1 | CDD | cd00112 | LDLa | 1282 | 1315 | 8.4232E-9 |
| 204 | g13804.t1 | CDD | cd00112 | LDLa | 1326 | 1359 | 5.93247E-4 |
| 225 | g13804.t1 | CDD | cd00054 | EGF_CA | 1405 | 1434 | 7.22701E-6 |
| 196 | g13804.t1 | CDD | cd00112 | LDLa | 2716 | 2748 | 5.60519E-10 |
| 202 | g13804.t1 | CDD | cd00112 | LDLa | 2757 | 2791 | 1.03669E-12 |
| 192 | g13804.t1 | CDD | cd00112 | LDLa | 2796 | 2831 | 3.8789E-8 |
| 208 | g13804.t1 | CDD | cd00112 | LDLa | 2840 | 2873 | 4.67843E-6 |
| 198 | g13804.t1 | CDD | cd00112 | LDLa | 2925 | 2958 | 2.09327E-8 |
| 195 | g13804.t1 | CDD | cd00112 | LDLa | 2969 | 3006 | 1.17677E-5 |
| 205 | g13804.t1 | CDD | cd00112 | LDLa | 3018 | 3049 | 2.88283E-10 |
| 207 | g13804.t1 | CDD | cd00112 | LDLa | 3060 | 3094 | 2.60327E-9 |
| 222 | g13804.t1 | CDD | cd00112 | LDLa | 3101 | 3132 | 9.64653E-7 |
| 223 | g13804.t1 | CDD | cd00054 | EGF_CA | 3137 | 3170 | 0.00296734 |
| 201 | g13804.t1 | CDD | cd00112 | LDLa | 3553 | 3585 | 1.02569E-5 |
| 191 | g13804.t1 | CDD | cd00112 | LDLa | 3594 | 3628 | 1.47606E-9 |
| 194 | g13804.t1 | CDD | cd00112 | LDLa | 3632 | 3665 | 2.21991E-8 |
| 215 | g13804.t1 | CDD | cd00112 | LDLa | 3676 | 3706 | 8.34116E-9 |
| 214 | g13804.t1 | CDD | cd00112 | LDLa | 3716 | 3755 | 1.31093E-5 |
| 211 | g13804.t1 | CDD | cd00112 | LDLa | 3758 | 3791 | 1.51341E-7 |
| 218 | g13804.t1 | CDD | cd00112 | LDLa | 3802 | 3836 | 1.14303E-12 |
| 216 | g13804.t1 | CDD | cd00112 | LDLa | 3841 | 3875 | 2.07873E-9 |
| 209 | g13804.t1 | CDD | cd00112 | LDLa | 3885 | 3917 | 7.85168E-7 |
| 213 | g13804.t1 | CDD | cd00112 | LDLa | 3931 | 3960 | 3.69356E-8 |
| 197 | g13804.t1 | CDD | cd00112 | LDLa | 3971 | 4006 | 1.28124E-7 |
| 151 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 51 | 98 | 1.0E-11 |
| 154 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 99 | 146 | 7.8E-8 |
| 180 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 156 | 194 | 8.6E-7 |
| 167 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 195 | 229 | 2.0E-10 |
| 156 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 230 | 267 | 5.2E-13 |
| 170 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 268 | 313 | 1.0E-8 |
| 133 | g13804.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 314 | 388 | 2.4E-12 |
| 143 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 397 | 713 | 2.8E-77 |
| 144 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 714 | 1027 | 1.2E-90 |
| 171 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1036 | 1081 | 4.3E-13 |
| 158 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1082 | 1115 | 1.1E-13 |
| 178 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1116 | 1152 | 6.0E-14 |
| 157 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1153 | 1196 | 9.2E-13 |
| 165 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1197 | 1238 | 2.0E-13 |
| 160 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1239 | 1279 | 5.0E-12 |
| 174 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1280 | 1320 | 1.2E-11 |
| 164 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1323 | 1371 | 1.6E-8 |
| 137 | g13804.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 1372 | 1408 | 4.1E-8 |
| 136 | g13804.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 1409 | 1446 | 3.0E-14 |
| 147 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 1449 | 1758 | 4.6E-95 |
| 141 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 1759 | 2083 | 1.1E-57 |
| 140 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 2084 | 2388 | 5.8E-76 |
| 146 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 2390 | 2714 | 3.1E-90 |
| 169 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2715 | 2754 | 7.4E-13 |
| 152 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2755 | 2794 | 1.0E-15 |
| 182 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2795 | 2836 | 6.9E-12 |
| 176 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2837 | 2879 | 2.2E-11 |
| 161 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2880 | 2920 | 8.2E-15 |
| 177 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2921 | 2964 | 2.0E-10 |
| 163 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2965 | 3013 | 5.0E-11 |
| 150 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3014 | 3057 | 2.4E-14 |
| 172 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3058 | 3095 | 3.5E-11 |
| 159 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3099 | 3132 | 1.8E-9 |
| 139 | g13804.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 3138 | 3183 | 5.3E-12 |
| 134 | g13804.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 3184 | 3222 | 2.9E-9 |
| 145 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 3225 | 3553 | 3.0E-99 |
| 166 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3554 | 3596 | 2.9E-10 |
| 168 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3597 | 3626 | 1.8E-9 |
| 153 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3629 | 3671 | 9.3E-13 |
| 173 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3672 | 3714 | 1.1E-12 |
| 148 | g13804.t1 | Gene3D | G3DSA:2.40.128.620 | - | 3715 | 3759 | 4.7E-9 |
| 155 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3760 | 3797 | 2.3E-12 |
| 181 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3798 | 3838 | 3.6E-14 |
| 179 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3839 | 3881 | 1.0E-12 |
| 149 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3882 | 3923 | 4.9E-10 |
| 162 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3924 | 3966 | 1.7E-9 |
| 175 | g13804.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3967 | 4012 | 1.1E-9 |
| 138 | g13804.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 4013 | 4056 | 2.8E-10 |
| 135 | g13804.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 4057 | 4087 | 3.2E-9 |
| 142 | g13804.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 4088 | 4415 | 2.3E-86 |
| 364 | g13804.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 4584 | 4646 | - |
| 365 | g13804.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 4623 | 4646 | - |
| 58 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 47 | 227 | 0.0 |
| 72 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 47 | 227 | 0.0 |
| 53 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 231 | 1629 | 0.0 |
| 67 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 231 | 1629 | 0.0 |
| 60 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 1622 | 1752 | 0.0 |
| 74 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 1622 | 1752 | 0.0 |
| 61 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 1795 | 2179 | 0.0 |
| 75 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 1795 | 2179 | 0.0 |
| 55 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 2159 | 2791 | 0.0 |
| 69 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 2159 | 2791 | 0.0 |
| 59 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 2777 | 2950 | 0.0 |
| 73 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 2777 | 2950 | 0.0 |
| 52 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 2945 | 3055 | 0.0 |
| 66 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 2945 | 3055 | 0.0 |
| 63 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 3057 | 3550 | 0.0 |
| 77 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 3057 | 3550 | 0.0 |
| 54 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 3562 | 3640 | 0.0 |
| 68 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 3562 | 3640 | 0.0 |
| 50 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 3632 | 3717 | 0.0 |
| 64 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 3632 | 3717 | 0.0 |
| 51 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 3716 | 3877 | 0.0 |
| 65 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 3716 | 3877 | 0.0 |
| 62 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 3879 | 4089 | 0.0 |
| 76 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 3879 | 4089 | 0.0 |
| 56 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 4118 | 4398 | 0.0 |
| 70 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 4118 | 4398 | 0.0 |
| 57 | g13804.t1 | PANTHER | PTHR24270 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED | 4477 | 4644 | 0.0 |
| 71 | g13804.t1 | PANTHER | PTHR24270:SF32 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2 | 4477 | 4644 | 0.0 |
| 82 | g13804.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 1089 | 1110 | 5.1E-46 |
| 83 | g13804.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 1128 | 1149 | 5.1E-46 |
| 81 | g13804.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 1169 | 1190 | 5.1E-46 |
| 78 | g13804.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 1209 | 1230 | 5.1E-46 |
| 80 | g13804.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 1253 | 1274 | 5.1E-46 |
| 79 | g13804.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 1292 | 1313 | 5.1E-46 |
| 22 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 52 | 90 | 5.8E-8 |
| 32 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 94 | 134 | 2.6E-5 |
| 21 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 191 | 227 | 1.2E-8 |
| 10 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 231 | 266 | 1.5E-10 |
| 14 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 271 | 312 | 2.5E-5 |
| 36 | g13804.t1 | Pfam | PF07645 | Calcium-binding EGF domain | 352 | 389 | 1.5E-5 |
| 39 | g13804.t1 | Pfam | PF14670 | Coagulation Factor Xa inhibitory site | 661 | 708 | 1.7E-9 |
| 43 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 889 | 928 | 1.7E-4 |
| 6 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1038 | 1074 | 8.8E-9 |
| 11 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1078 | 1113 | 5.5E-12 |
| 2 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1117 | 1151 | 7.8E-11 |
| 29 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1156 | 1193 | 2.8E-9 |
| 12 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1197 | 1233 | 6.2E-10 |
| 27 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1240 | 1277 | 4.6E-9 |
| 31 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1281 | 1314 | 2.0E-8 |
| 5 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1325 | 1363 | 1.0E-5 |
| 37 | g13804.t1 | Pfam | PF07645 | Calcium-binding EGF domain | 1405 | 1443 | 2.7E-6 |
| 46 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 1534 | 1573 | 3.2E-5 |
| 42 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 1580 | 1619 | 2.2E-9 |
| 48 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 1905 | 1947 | 6.0E-5 |
| 45 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 2218 | 2258 | 1.2E-5 |
| 44 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 2264 | 2300 | 5.7E-6 |
| 47 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 2494 | 2531 | 1.8E-5 |
| 23 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2715 | 2750 | 4.5E-11 |
| 26 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2756 | 2791 | 1.2E-12 |
| 13 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2795 | 2834 | 1.0E-7 |
| 16 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2838 | 2877 | 2.6E-8 |
| 28 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2880 | 2918 | 3.3E-10 |
| 25 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2924 | 2960 | 5.8E-8 |
| 33 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2966 | 3010 | 2.1E-7 |
| 15 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3017 | 3053 | 9.1E-10 |
| 9 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3058 | 3094 | 4.3E-10 |
| 18 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3099 | 3136 | 4.8E-9 |
| 38 | g13804.t1 | Pfam | PF12662 | Complement Clr-like EGF-like | 3159 | 3182 | 4.3E-8 |
| 49 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 3357 | 3400 | 7.2E-6 |
| 40 | g13804.t1 | Pfam | PF14670 | Coagulation Factor Xa inhibitory site | 3496 | 3548 | 1.6E-8 |
| 19 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3555 | 3589 | 1.5E-7 |
| 7 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3593 | 3628 | 1.5E-8 |
| 34 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3631 | 3667 | 7.0E-10 |
| 4 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3673 | 3706 | 2.6E-8 |
| 30 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3716 | 3755 | 2.0E-5 |
| 8 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3757 | 3791 | 2.5E-9 |
| 3 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3801 | 3836 | 3.8E-11 |
| 24 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3840 | 3875 | 1.2E-10 |
| 20 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3885 | 3917 | 3.7E-6 |
| 17 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3925 | 3960 | 2.0E-7 |
| 1 | g13804.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3970 | 4006 | 4.1E-6 |
| 35 | g13804.t1 | Pfam | PF07645 | Calcium-binding EGF domain | 4052 | 4083 | 2.3E-7 |
| 41 | g13804.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 4239 | 4280 | 2.1E-9 |
| 185 | g13804.t1 | Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 39 | - |
| 186 | g13804.t1 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 22 | - |
| 187 | g13804.t1 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 23 | 34 | - |
| 189 | g13804.t1 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 35 | 39 | - |
| 184 | g13804.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 40 | 4474 | - |
| 188 | g13804.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 4475 | 4497 | - |
| 183 | g13804.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 4498 | 4646 | - |
| 341 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 67 | 90 | - |
| 338 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 112 | 134 | - |
| 337 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 244 | 266 | - |
| 354 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 289 | 312 | - |
| 358 | g13804.t1 | ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 352 | 375 | - |
| 359 | g13804.t1 | ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 366 | 377 | - |
| 335 | g13804.t1 | ProSitePatterns | PS01186 | EGF-like domain signature 2. | 375 | 389 | - |
| 345 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1091 | 1113 | - |
| 349 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1130 | 1153 | - |
| 342 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1255 | 1277 | - |
| 353 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1294 | 1319 | - |
| 347 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1340 | 1363 | - |
| 357 | g13804.t1 | ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 1405 | 1428 | - |
| 362 | g13804.t1 | ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 1419 | 1430 | - |
| 333 | g13804.t1 | ProSitePatterns | PS01186 | EGF-like domain signature 2. | 1428 | 1443 | - |
| 340 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 2769 | 2791 | - |
| 344 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 2937 | 2962 | - |
| 351 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3030 | 3053 | - |
| 352 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3113 | 3136 | - |
| 363 | g13804.t1 | ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 3153 | 3164 | - |
| 334 | g13804.t1 | ProSitePatterns | PS01186 | EGF-like domain signature 2. | 3162 | 3177 | - |
| 356 | g13804.t1 | ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 3179 | 3203 | - |
| 361 | g13804.t1 | ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 3194 | 3205 | - |
| 343 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3645 | 3669 | - |
| 346 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3814 | 3836 | - |
| 339 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3853 | 3875 | - |
| 348 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3939 | 3964 | - |
| 350 | g13804.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3984 | 4006 | - |
| 355 | g13804.t1 | ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 4052 | 4076 | - |
| 360 | g13804.t1 | ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 4067 | 4078 | - |
| 336 | g13804.t1 | ProSitePatterns | PS00022 | EGF-like domain signature 1. | 4448 | 4459 | - |
| 436 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 52 | 91 | 11.788 |
| 411 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 94 | 135 | 11.7 |
| 426 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 138 | 188 | 10.688 |
| 402 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 191 | 228 | 12.825 |
| 405 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 231 | 267 | 13.387 |
| 428 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 270 | 313 | 12.413 |
| 441 | g13804.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 352 | 390 | 10.35 |
| 379 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 436 | 480 | 8.184 |
| 397 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 481 | 523 | 9.97 |
| 372 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 524 | 564 | 6.629 |
| 386 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 565 | 608 | 12.453 |
| 375 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 609 | 652 | 5.817 |
| 390 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 759 | 801 | 12.036 |
| 398 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 802 | 844 | 8.625 |
| 371 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 845 | 888 | 9.785 |
| 370 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 889 | 931 | 11.711 |
| 424 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1037 | 1075 | 13.637 |
| 417 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1078 | 1114 | 13.887 |
| 406 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1117 | 1154 | 14.012 |
| 425 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1157 | 1194 | 13.4 |
| 423 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1197 | 1234 | 13.863 |
| 418 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1240 | 1278 | 13.55 |
| 422 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1281 | 1320 | 12.6 |
| 412 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1325 | 1364 | 11.788 |
| 437 | g13804.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 1405 | 1444 | 8.88 |
| 377 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1491 | 1532 | 8.88 |
| 389 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1533 | 1575 | 14.797 |
| 388 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1578 | 1621 | 15.099 |
| 394 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1622 | 1666 | 9.785 |
| 399 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1667 | 1707 | 6.931 |
| 385 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1805 | 1854 | 7.58 |
| 401 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1855 | 1904 | 5.956 |
| 378 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1905 | 1950 | 10.551 |
| 374 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1951 | 1995 | 7.557 |
| 369 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2125 | 2172 | 9.112 |
| 376 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2173 | 2217 | 10.295 |
| 382 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2218 | 2261 | 13.126 |
| 384 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2262 | 2303 | 11.502 |
| 387 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2493 | 2533 | 11.038 |
| 367 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2534 | 2580 | 11.107 |
| 380 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2581 | 2622 | 12.964 |
| 393 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2623 | 2664 | 5.422 |
| 435 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2715 | 2753 | 13.8 |
| 403 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2756 | 2792 | 14.6 |
| 430 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2795 | 2835 | 11.463 |
| 416 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2839 | 2878 | 12.225 |
| 420 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2881 | 2919 | 14.225 |
| 410 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2924 | 2963 | 13.025 |
| 407 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2966 | 3013 | 13.075 |
| 415 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3017 | 3054 | 13.863 |
| 421 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3059 | 3095 | 13.538 |
| 409 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3100 | 3137 | 12.463 |
| 438 | g13804.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 3137 | 3178 | 8.816 |
| 442 | g13804.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 3179 | 3215 | 7.121 |
| 373 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3267 | 3314 | 5.562 |
| 392 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3315 | 3356 | 11.247 |
| 368 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3357 | 3402 | 9.042 |
| 381 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3403 | 3446 | 11.409 |
| 366 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3447 | 3487 | 6.049 |
| 431 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3547 | 3590 | 11.475 |
| 427 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3593 | 3629 | 13.75 |
| 419 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3631 | 3670 | 13.613 |
| 408 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3673 | 3712 | 13.088 |
| 414 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3715 | 3756 | 11.475 |
| 434 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3757 | 3796 | 13.275 |
| 429 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3801 | 3837 | 14.5 |
| 432 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3840 | 3876 | 13.238 |
| 433 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3884 | 3922 | 12.2 |
| 404 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3925 | 3965 | 12.838 |
| 413 | g13804.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3970 | 4007 | 11.9 |
| 440 | g13804.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 4052 | 4088 | 7.247 |
| 396 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 4139 | 4189 | 6.838 |
| 383 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 4190 | 4238 | 11.572 |
| 391 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 4239 | 4282 | 14.658 |
| 395 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 4284 | 4327 | 12.848 |
| 400 | g13804.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 4328 | 4368 | 6.513 |
| 439 | g13804.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 4426 | 4460 | 12.843 |
| 239 | g13804.t1 | SMART | SM00192 | LDLa_2 | 52 | 92 | 4.1E-9 |
| 234 | g13804.t1 | SMART | SM00192 | LDLa_2 | 94 | 136 | 1.7E-8 |
| 230 | g13804.t1 | SMART | SM00192 | LDLa_2 | 138 | 189 | 0.0031 |
| 247 | g13804.t1 | SMART | SM00192 | LDLa_2 | 191 | 229 | 2.0E-12 |
| 242 | g13804.t1 | SMART | SM00192 | LDLa_2 | 231 | 268 | 1.1E-13 |
| 313 | g13804.t1 | SMART | SM00181 | egf_5 | 231 | 267 | 210.0 |
| 231 | g13804.t1 | SMART | SM00192 | LDLa_2 | 270 | 314 | 3.5E-7 |
| 322 | g13804.t1 | SMART | SM00181 | egf_5 | 311 | 351 | 68.0 |
| 268 | g13804.t1 | SMART | SM00179 | egfca_6 | 352 | 390 | 2.9E-10 |
| 315 | g13804.t1 | SMART | SM00181 | egf_5 | 355 | 390 | 9.9E-5 |
| 273 | g13804.t1 | SMART | SM00135 | LY_2 | 418 | 458 | 4.5 |
| 296 | g13804.t1 | SMART | SM00135 | LY_2 | 461 | 503 | 0.3 |
| 292 | g13804.t1 | SMART | SM00135 | LY_2 | 504 | 544 | 6.5E-4 |
| 272 | g13804.t1 | SMART | SM00135 | LY_2 | 545 | 587 | 8.9E-8 |
| 280 | g13804.t1 | SMART | SM00135 | LY_2 | 589 | 630 | 2.8 |
| 325 | g13804.t1 | SMART | SM00181 | egf_5 | 660 | 709 | 0.0087 |
| 297 | g13804.t1 | SMART | SM00135 | LY_2 | 740 | 781 | 0.0068 |
| 281 | g13804.t1 | SMART | SM00135 | LY_2 | 782 | 824 | 0.0016 |
| 293 | g13804.t1 | SMART | SM00135 | LY_2 | 825 | 868 | 2.0E-6 |
| 278 | g13804.t1 | SMART | SM00135 | LY_2 | 869 | 911 | 8.3E-7 |
| 277 | g13804.t1 | SMART | SM00135 | LY_2 | 912 | 953 | 0.062 |
| 319 | g13804.t1 | SMART | SM00181 | egf_5 | 983 | 1026 | 23.0 |
| 248 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1037 | 1076 | 1.3E-13 |
| 312 | g13804.t1 | SMART | SM00181 | egf_5 | 1037 | 1075 | 220.0 |
| 258 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1078 | 1115 | 1.1E-14 |
| 252 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1117 | 1155 | 1.4E-14 |
| 314 | g13804.t1 | SMART | SM00181 | egf_5 | 1117 | 1154 | 240.0 |
| 244 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1157 | 1195 | 2.0E-13 |
| 254 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1197 | 1235 | 1.9E-12 |
| 257 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1240 | 1279 | 2.8E-12 |
| 250 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1281 | 1321 | 2.4E-13 |
| 237 | g13804.t1 | SMART | SM00192 | LDLa_2 | 1325 | 1365 | 6.9E-9 |
| 310 | g13804.t1 | SMART | SM00181 | egf_5 | 1362 | 1404 | 2.6 |
| 269 | g13804.t1 | SMART | SM00179 | egfca_6 | 1364 | 1404 | 0.27 |
| 264 | g13804.t1 | SMART | SM00179 | egfca_6 | 1405 | 1444 | 1.6E-9 |
| 309 | g13804.t1 | SMART | SM00181 | egf_5 | 1408 | 1444 | 0.005 |
| 285 | g13804.t1 | SMART | SM00135 | LY_2 | 1513 | 1555 | 6.0E-12 |
| 302 | g13804.t1 | SMART | SM00135 | LY_2 | 1556 | 1601 | 2.6E-9 |
| 290 | g13804.t1 | SMART | SM00135 | LY_2 | 1602 | 1644 | 1.3E-11 |
| 300 | g13804.t1 | SMART | SM00135 | LY_2 | 1646 | 1688 | 0.19 |
| 331 | g13804.t1 | SMART | SM00181 | egf_5 | 1715 | 1756 | 4.6E-4 |
| 299 | g13804.t1 | SMART | SM00135 | LY_2 | 1834 | 1877 | 0.35 |
| 279 | g13804.t1 | SMART | SM00135 | LY_2 | 1880 | 1931 | 5.7E-6 |
| 287 | g13804.t1 | SMART | SM00135 | LY_2 | 1932 | 1973 | 0.018 |
| 298 | g13804.t1 | SMART | SM00135 | LY_2 | 1975 | 2016 | 82.0 |
| 326 | g13804.t1 | SMART | SM00181 | egf_5 | 2042 | 2079 | 24.0 |
| 283 | g13804.t1 | SMART | SM00135 | LY_2 | 2105 | 2150 | 3.0 |
| 274 | g13804.t1 | SMART | SM00135 | LY_2 | 2151 | 2197 | 4.1E-8 |
| 282 | g13804.t1 | SMART | SM00135 | LY_2 | 2198 | 2241 | 1.9E-5 |
| 294 | g13804.t1 | SMART | SM00135 | LY_2 | 2242 | 2284 | 9.5E-8 |
| 276 | g13804.t1 | SMART | SM00135 | LY_2 | 2285 | 2325 | 61.0 |
| 330 | g13804.t1 | SMART | SM00181 | egf_5 | 2355 | 2400 | 17.0 |
| 301 | g13804.t1 | SMART | SM00135 | LY_2 | 2474 | 2515 | 1.1E-9 |
| 306 | g13804.t1 | SMART | SM00135 | LY_2 | 2516 | 2560 | 0.27 |
| 270 | g13804.t1 | SMART | SM00135 | LY_2 | 2561 | 2603 | 2.1E-14 |
| 303 | g13804.t1 | SMART | SM00135 | LY_2 | 2604 | 2644 | 3.1 |
| 327 | g13804.t1 | SMART | SM00181 | egf_5 | 2672 | 2710 | 100.0 |
| 246 | g13804.t1 | SMART | SM00192 | LDLa_2 | 2715 | 2754 | 4.3E-14 |
| 241 | g13804.t1 | SMART | SM00192 | LDLa_2 | 2756 | 2793 | 2.3E-16 |
| 308 | g13804.t1 | SMART | SM00181 | egf_5 | 2756 | 2792 | 66.0 |
| 261 | g13804.t1 | SMART | SM00192 | LDLa_2 | 2795 | 2836 | 1.0E-11 |
| 240 | g13804.t1 | SMART | SM00192 | LDLa_2 | 2839 | 2879 | 9.0E-12 |
| 251 | g13804.t1 | SMART | SM00192 | LDLa_2 | 2881 | 2920 | 5.9E-16 |
| 228 | g13804.t1 | SMART | SM00192 | LDLa_2 | 2924 | 2964 | 5.3E-10 |
| 236 | g13804.t1 | SMART | SM00192 | LDLa_2 | 2966 | 3014 | 2.3E-10 |
| 232 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3017 | 3055 | 6.7E-14 |
| 328 | g13804.t1 | SMART | SM00181 | egf_5 | 3017 | 3054 | 110.0 |
| 262 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3059 | 3096 | 9.1E-12 |
| 235 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3100 | 3138 | 5.8E-12 |
| 266 | g13804.t1 | SMART | SM00179 | egfca_6 | 3137 | 3178 | 9.1E-7 |
| 311 | g13804.t1 | SMART | SM00181 | egf_5 | 3140 | 3178 | 5.1E-4 |
| 263 | g13804.t1 | SMART | SM00179 | egfca_6 | 3179 | 3220 | 3.5E-7 |
| 318 | g13804.t1 | SMART | SM00181 | egf_5 | 3182 | 3220 | 15.0 |
| 289 | g13804.t1 | SMART | SM00135 | LY_2 | 3247 | 3289 | 1.3 |
| 271 | g13804.t1 | SMART | SM00135 | LY_2 | 3295 | 3337 | 1.0E-8 |
| 304 | g13804.t1 | SMART | SM00135 | LY_2 | 3338 | 3380 | 0.033 |
| 295 | g13804.t1 | SMART | SM00135 | LY_2 | 3382 | 3425 | 1.3E-9 |
| 291 | g13804.t1 | SMART | SM00135 | LY_2 | 3426 | 3468 | 4.2E-6 |
| 307 | g13804.t1 | SMART | SM00181 | egf_5 | 3495 | 3549 | 0.32 |
| 229 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3547 | 3591 | 5.3E-9 |
| 233 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3593 | 3630 | 3.4E-11 |
| 256 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3631 | 3671 | 9.3E-14 |
| 329 | g13804.t1 | SMART | SM00181 | egf_5 | 3631 | 3670 | 170.0 |
| 249 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3673 | 3713 | 1.1E-11 |
| 324 | g13804.t1 | SMART | SM00181 | egf_5 | 3673 | 3732 | 220.0 |
| 243 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3715 | 3756 | 2.2E-8 |
| 259 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3757 | 3797 | 5.3E-13 |
| 332 | g13804.t1 | SMART | SM00181 | egf_5 | 3757 | 3796 | 140.0 |
| 253 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3801 | 3838 | 6.3E-15 |
| 323 | g13804.t1 | SMART | SM00181 | egf_5 | 3801 | 3837 | 46.0 |
| 245 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3840 | 3877 | 8.1E-14 |
| 260 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3884 | 3923 | 2.7E-8 |
| 238 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3925 | 3966 | 9.5E-12 |
| 255 | g13804.t1 | SMART | SM00192 | LDLa_2 | 3970 | 4008 | 7.1E-12 |
| 267 | g13804.t1 | SMART | SM00179 | egfca_6 | 3995 | 4051 | 0.084 |
| 316 | g13804.t1 | SMART | SM00181 | egf_5 | 4011 | 4051 | 0.25 |
| 265 | g13804.t1 | SMART | SM00179 | egfca_6 | 4052 | 4093 | 2.6E-6 |
| 320 | g13804.t1 | SMART | SM00181 | egf_5 | 4055 | 4093 | 0.0099 |
| 286 | g13804.t1 | SMART | SM00135 | LY_2 | 4121 | 4161 | 0.48 |
| 284 | g13804.t1 | SMART | SM00135 | LY_2 | 4170 | 4218 | 0.0051 |
| 275 | g13804.t1 | SMART | SM00135 | LY_2 | 4219 | 4262 | 1.4E-12 |
| 288 | g13804.t1 | SMART | SM00135 | LY_2 | 4263 | 4306 | 5.1E-10 |
| 305 | g13804.t1 | SMART | SM00135 | LY_2 | 4307 | 4348 | 13.0 |
| 321 | g13804.t1 | SMART | SM00181 | egf_5 | 4377 | 4417 | 13.0 |
| 317 | g13804.t1 | SMART | SM00181 | egf_5 | 4425 | 4460 | 14.0 |
| 95 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 50 | 87 | 4.06E-8 |
| 99 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 89 | 134 | 1.83E-6 |
| 109 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 187 | 227 | 5.11E-8 |
| 92 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 227 | 267 | 1.22E-10 |
| 125 | g13804.t1 | SUPERFAMILY | SSF57184 | Growth factor receptor domain | 289 | 1027 | 2.51E-15 |
| 90 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 414 | 628 | 6.67E-36 |
| 131 | g13804.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 658 | 718 | 6.81E-6 |
| 84 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 739 | 973 | 1.44E-41 |
| 120 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1038 | 1072 | 3.27E-8 |
| 117 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1071 | 1113 | 9.03E-12 |
| 124 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1113 | 1151 | 7.33E-10 |
| 111 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1157 | 1194 | 6.28E-9 |
| 118 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1193 | 1234 | 1.57E-8 |
| 106 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1244 | 1277 | 6.15E-8 |
| 98 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1280 | 1316 | 3.8E-9 |
| 93 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1323 | 1359 | 1.31E-7 |
| 126 | g13804.t1 | SUPERFAMILY | SSF57184 | Growth factor receptor domain | 1366 | 1756 | 4.55E-19 |
| 86 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 1451 | 1710 | 4.19E-45 |
| 89 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 1761 | 2024 | 6.15E-29 |
| 130 | g13804.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 2040 | 2086 | 9.36E-5 |
| 87 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 2102 | 2350 | 2.49E-32 |
| 91 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 2405 | 2666 | 3.79E-41 |
| 110 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2713 | 2752 | 1.19E-9 |
| 122 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2749 | 2792 | 2.36E-12 |
| 115 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2790 | 2831 | 1.13E-7 |
| 113 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2838 | 2877 | 9.69E-8 |
| 100 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2873 | 2917 | 5.24E-11 |
| 114 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2923 | 2959 | 1.24E-8 |
| 97 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2967 | 3008 | 1.07E-5 |
| 121 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3014 | 3050 | 1.09E-9 |
| 112 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3054 | 3094 | 1.57E-8 |
| 104 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3099 | 3132 | 1.96E-8 |
| 129 | g13804.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 3145 | 3185 | 2.58E-9 |
| 128 | g13804.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 3171 | 3219 | 2.31E-8 |
| 85 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 3227 | 3490 | 4.97E-43 |
| 105 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3551 | 3585 | 1.02E-6 |
| 116 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3588 | 3628 | 5.11E-10 |
| 123 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3631 | 3669 | 9.82E-9 |
| 102 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3674 | 3711 | 5.37E-9 |
| 94 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3709 | 3753 | 7.72E-7 |
| 96 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3757 | 3795 | 5.5E-8 |
| 108 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3799 | 3836 | 3.01E-10 |
| 107 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3840 | 3877 | 1.7E-9 |
| 101 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3883 | 3921 | 7.33E-8 |
| 119 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3925 | 3961 | 1.27E-8 |
| 103 | g13804.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3970 | 4007 | 9.95E-8 |
| 127 | g13804.t1 | SUPERFAMILY | SSF57184 | Growth factor receptor domain | 4012 | 4448 | 7.53E-18 |
| 88 | g13804.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 4101 | 4372 | 1.03E-43 |
| 132 | g13804.t1 | SignalP_EUK | SignalP-noTM | SignalP-noTM | 1 | 39 | - |
| 227 | g13804.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 20 | 39 | - |
| 226 | g13804.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 4475 | 4497 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0005515 | protein binding | MF |
| GO:0005509 | calcium ion binding | MF |
KEGG
Orthology
- This transcript has been annotated with K06233 (low density lipoprotein-related protein 2)
Pathway
- This transcript belongs to the following pathways
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
