General information for g14414.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Putative Chaoptin.
Parent gene
- The parent gene g14414 is located on chr_4: 379155..383910 (+ strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_4 | g14414 | g14414.t1 | TSS | g14414.t1 | 379125 | 379125 |
| chr_4 | g14414 | g14414.t1 | isoform | g14414.t1 | 379155 | 383910 |
| chr_4 | g14414 | g14414.t1 | exon | g14414.t1.exon1 | 379155 | 379335 |
| chr_4 | g14414 | g14414.t1 | cds | g14414.t1.CDS1 | 379155 | 379335 |
| chr_4 | g14414 | g14414.t1 | exon | g14414.t1.exon2 | 379393 | 380348 |
| chr_4 | g14414 | g14414.t1 | cds | g14414.t1.CDS2 | 379393 | 380348 |
| chr_4 | g14414 | g14414.t1 | exon | g14414.t1.exon3 | 380560 | 380637 |
| chr_4 | g14414 | g14414.t1 | cds | g14414.t1.CDS3 | 380560 | 380637 |
| chr_4 | g14414 | g14414.t1 | exon | g14414.t1.exon4 | 380694 | 381775 |
| chr_4 | g14414 | g14414.t1 | cds | g14414.t1.CDS4 | 380694 | 381775 |
| chr_4 | g14414 | g14414.t1 | exon | g14414.t1.exon5 | 381883 | 382937 |
| chr_4 | g14414 | g14414.t1 | cds | g14414.t1.CDS5 | 381883 | 382937 |
| chr_4 | g14414 | g14414.t1 | exon | g14414.t1.exon6 | 382994 | 383910 |
| chr_4 | g14414 | g14414.t1 | cds | g14414.t1.CDS6 | 382994 | 383910 |
| chr_4 | g14414 | g14414.t1 | TTS | g14414.t1 | 384023 | 384023 |
Sequences
>g14414.t1 Gene=g14414 Length=4269
ATGGTTTTTAAAGTTTTATTTCTTTTGTTTTCTTTAATTTCAACAATTTTTGCTCAAGAA
GCAACAATTAGTTGCAATTACAATTATCGTGGTGCAAATTATCCATATACTTGCATACTG
AATATAAATAACCCAAATGGTTTTGATGATTTTGAGAATATCATGGGTCAGCATGTGGAA
GGTTTTGATAATGAAAATGTAACATCAATAGATGCTTTTGCTCAAACTTCAACCATCATT
CCACAAATACTTTGTTCACAGTTCCCTAATTTAGAACAAATTACCTTCATGTTTAGTGAA
GTTGAAGTTATAAATGAGCGATCATTTGCATTATGCGGAGGAAGCCTTAGAACATTGAAT
GTTATTCATAATAACATCGCTCAAGTCTCTACTAGAACATTCAGAAACAACTCAAATTTA
CGATATGTTTATCTCAGTAATAATTTTATCACAGAAATTGACGCTGAAGCTTTCACTGGA
TCTGCGATTTCTTATTTAGATCTTGAATTTAACTTATTTTCAACTTTCGATCCATTACCA
TTAGAGCGCATCAATACAACACTTACAACTCTTGGTGTTTTTGCTAATTACATCACAACT
TTACCAAGCAATGGATTTGCAAATATTCGTAATCTTGAATGGCTTGATATGACTGCTAAT
GAATTTCAATCACTACCTGACGATGCTTTTGTGGGACTTGATAGATTAAGAATGCTTTAT
CTAATAGCATGTAATTTAAGACAGCCAAATGCTCTTTGGTTTGAAGCATTGCCTGAACTT
GTTGAACTACATTTAGAACTTAATGAAATCACCGACTTATCAAACGGAGTATTTAATGGA
TTAAGACGACTTACAAATTTATATCTTGGTTATAATGAACTAAGCGAACTTACAACAGCT
CCATTTGGAGGGAGTCTAATGAATATTGAAGTTTTATCAGTTCTTAATAATCAAGTTTCT
GCCATTCATAATTTTTTCTTCCATGTAGCTGAAAATTTAAATGCTCTTGAATTAGGTGGA
AATAGTTGTTCAAGTCAAAATTTTATAAATATTCAAAATGAACGAAGTGCAACACAGTCA
GCTTTGAGAAGATGCTTTGATAATTTTGGACCTGAATTTATCAATTGTAATTATCAGGCT
TCTGGTGGAAATTACTCGTGTGTTTTAACATTGAGAAATCCTAATGGAAATAATTTTGAA
ACAATTGAAGGAGAGCATTTAGCTGATCGTGAAAATGAAGACGTAGTTTCAGTGACAGCT
TTCGAAACAAACACTTTGACAGTGCCATCGATTCTATGTAGTGAATTTTCACAATTACAA
AATATTGTCATCATTGCAAGTTATATAGAACAACTTCGAGTGGATGCTTTTAACAATTGT
TTGATGGTGGAACAAATTGACCTTTCATATAATGGAATAAGAACTATTGAAGATCAAACT
TTTAGTCAAAATTCAAATCTTCGCCTCTTAAACCTTCGTAGAAATGTAATCAATCGAATC
GGAGATCAAGCTTTTACAGGAAGTGCTATAGAAAATCTTGATTTATCATATAATGAGATT
TTTGACTTTCATTCTGCATCATTTGAACCAATTAACATGACACTTCGCTCTCTTGACTTG
AATAGCAATCGTATTGCCATTTTATATCAGGATACATTTGCAAATCTTCGCAATTTGAAT
GAAATTATTCTCAATGGAAATTATCTTTATATTGTACCAAATAGTGCATTTCAATCATTA
AGCAATGTTCAAACGCTTGGTCTTTCAAATTGTGGACTTCAAGAATTACAAATTGAATGG
TTTTCTAATTTACGAAATCTTCAAAATTTGTATATTGCAAGCAATTCTTTAAAAGAATTT
CCTGCTACTATTTTTGATTCACTCGAAAATCTTCTTCAAATTTTCTTTTATGATAACCAA
ATTGTTGAGCTAAATTCAAATTCATTTGGAGCATCACTTGAAAATTTGACATTGCTATAT
GGTACATCAAATGAAATCAATTCAATTGATAATAAAATTCTTACGAGAGGAATTTCACTT
CAAAACTTACTGTTTACTAATAATTTGTGTACACAAAATAACTTCTATAATGTTGCAAAT
AACATTGAAATTGTAAGAGAAGCATTAAGTCGCTGTATTGAAAATTTTGAGATTGAACCA
AGACTTGAATGTCATTATGAACTTAATGAATTTGATGGAACCTATTCATGTGCTTTGACC
GCAATAAATCCAGTTGGAAGAGAAATTGAAACAATCAATGGACAGCATATTACAGGAAAC
AATGACGATGATGTAACTTTTGTCTTTGCAGATTTTACCAACACTCTGACAATTCCATCA
GCTTTATGTAGTCAATTCAGTAATTTGAATCATTTAGAATTTTTGGGGAGTTTTGTAAAT
ACTCTTAGTTATTCATCATTTATCAATTGTCGGAGTTTAACTAGTTTCACAGCTGTAGCC
AACAATATCTCAATTGTACCACCACTTGTATTTGACGGTGCTAGAAATCTTTCTATTCTC
ATTCTTTCATCTAATCGTATTCATAGACTTTCGGCTAATGCATTTTACGGAACACAAATA
AGTCAACTTGATTTAGCTCATAATCAACTTGAAGAATTTGATGTAACAGCGTTTTCAGTG
ATTGGTAACACATTGAGATCATTACGTTTAACAGATAATATGATTCAACATTTACCTATT
GGTGCATTTGAGAGTACACCAAATTTAATTGAACTTGATCTAAGTCATAATCATCTTTAC
ACAGTACCAAGTGACATTTTTAGTCCTTTAATTGATTCACTTAATGCACTACAACTTCTT
GATTGTGGATTATCAAGGATTGATGAGCAATGGTTCCGAGGCCTTGATCAACTTCATTAT
TTGCAGCTTTCATGGAATGAAATAGATCATTTGCCTGAAAATATTTTTGATCTACCAAAA
CTTGAAAACTTGGGACTTGCCCATAATAATTTGCAAATACTTGACTCAAAAAGTTTTGGT
AGATCGCTTTCAGTACTTTTTCATATCGATGCTTCTGAGAATAAAATAAATGCTTTTGAT
CCTCATTTATTTGAAAATGCAACAAGTCTTTTTGGTATAGAGTTGATGAACAATCTTTGC
ATAGATAGTGCGTTTCTAGAAATTCCTTATTATAGAGAAAACATTCGTGGATACTTCCTA
GAGTGTTTTGAAATATATGAAGATGCATCATTAAGCTGCAAATTTAGTGAAGATGAAGCA
AATTATAGATGTGATTTAACAATTAGAAATGAAATGGAAAGATTGCGTTTCCAGAGAGTT
GAAGGCGAACATTTGGAAGGAAGAAATGACAATTATGTGACAAATATTTATGCTGAAGGA
GGCATTTCAAGATTAATCCCATCAATATTATGTCAACAGTTTCGATTTATTGAATCAATT
GTTTTTGTCAACAGTCAAATTGAATTCATTTCACTTGAAACATTTAGAAATTGCGAATTT
TTGTTCAGTCTCAACCTAGGAGCAAACAGAATTTCAAGTATTTCTGATGGTGTATTCATC
AATAATCCTTATTTGTCTAGCTTAACTTTGGCATTGAATAGAATTGAAAGTATAAGCTCT
AGAGCTTTTGAAGGAACACAAATTTACTATTTGGATTTAGAAGATAACCATTTAGCGACA
TTTGATCCAATTTCATTTGCACCAATTTTCAACAATCTTTTCTATCTTATTTTACGTCAT
AATCTCTACTCAACTTTTCCAAGAAACGCTTTTACTGGCATGAGAAATCTAAGAATGATT
AATCTTAATGGAAACAGACTTGACTTTTTACCATCAAATGCCTTTCGCTCATTAACATCT
CTTCATACACTTGAATTGGCTGATTGCAACCTAAATAATTTAAATTACCGTTGGTTCGAT
GATCTTCAAAATTTAGAAACACTAGAATTTGATATGAATGCAATTACACAGTTGCCAAAT
TTAGTCTTTGATTTACCAAATTTGAGTTATCTTGGAATTGCAGCTAACAGACTTTCTGAG
CTTAATTTAAATGCTTTTGGAAGATCAATTGTTTCACTTAGAACAATTCGAGCTGAAAAT
AACCAAATTATTGCAATTGATGAAAGGATAATTGACAATGCTATTCAATTGTTTTCATTT
ACATTGAGTGGAAATGTTTGCGTAAATTTTGATTTTATTGAAGTACAAGAAAATATTGAA
ACTGTAAGAGAATATTTAAATGGGTGTTTTGAAAACTTCAGAAATGGTACAGAAATTTTA
ATAAACTAA
>g14414.t1 Gene=g14414 Length=1422
MVFKVLFLLFSLISTIFAQEATISCNYNYRGANYPYTCILNINNPNGFDDFENIMGQHVE
GFDNENVTSIDAFAQTSTIIPQILCSQFPNLEQITFMFSEVEVINERSFALCGGSLRTLN
VIHNNIAQVSTRTFRNNSNLRYVYLSNNFITEIDAEAFTGSAISYLDLEFNLFSTFDPLP
LERINTTLTTLGVFANYITTLPSNGFANIRNLEWLDMTANEFQSLPDDAFVGLDRLRMLY
LIACNLRQPNALWFEALPELVELHLELNEITDLSNGVFNGLRRLTNLYLGYNELSELTTA
PFGGSLMNIEVLSVLNNQVSAIHNFFFHVAENLNALELGGNSCSSQNFINIQNERSATQS
ALRRCFDNFGPEFINCNYQASGGNYSCVLTLRNPNGNNFETIEGEHLADRENEDVVSVTA
FETNTLTVPSILCSEFSQLQNIVIIASYIEQLRVDAFNNCLMVEQIDLSYNGIRTIEDQT
FSQNSNLRLLNLRRNVINRIGDQAFTGSAIENLDLSYNEIFDFHSASFEPINMTLRSLDL
NSNRIAILYQDTFANLRNLNEIILNGNYLYIVPNSAFQSLSNVQTLGLSNCGLQELQIEW
FSNLRNLQNLYIASNSLKEFPATIFDSLENLLQIFFYDNQIVELNSNSFGASLENLTLLY
GTSNEINSIDNKILTRGISLQNLLFTNNLCTQNNFYNVANNIEIVREALSRCIENFEIEP
RLECHYELNEFDGTYSCALTAINPVGREIETINGQHITGNNDDDVTFVFADFTNTLTIPS
ALCSQFSNLNHLEFLGSFVNTLSYSSFINCRSLTSFTAVANNISIVPPLVFDGARNLSIL
ILSSNRIHRLSANAFYGTQISQLDLAHNQLEEFDVTAFSVIGNTLRSLRLTDNMIQHLPI
GAFESTPNLIELDLSHNHLYTVPSDIFSPLIDSLNALQLLDCGLSRIDEQWFRGLDQLHY
LQLSWNEIDHLPENIFDLPKLENLGLAHNNLQILDSKSFGRSLSVLFHIDASENKINAFD
PHLFENATSLFGIELMNNLCIDSAFLEIPYYRENIRGYFLECFEIYEDASLSCKFSEDEA
NYRCDLTIRNEMERLRFQRVEGEHLEGRNDNYVTNIYAEGGISRLIPSILCQQFRFIESI
VFVNSQIEFISLETFRNCEFLFSLNLGANRISSISDGVFINNPYLSSLTLALNRIESISS
RAFEGTQIYYLDLEDNHLATFDPISFAPIFNNLFYLILRHNLYSTFPRNAFTGMRNLRMI
NLNGNRLDFLPSNAFRSLTSLHTLELADCNLNNLNYRWFDDLQNLETLEFDMNAITQLPN
LVFDLPNLSYLGIAANRLSELNLNAFGRSIVSLRTIRAENNQIIAIDERIIDNAIQLFSF
TLSGNVCVNFDFIEVQENIETVREYLNGCFENFRNGTEILIN
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 36 | g14414.t1 | Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 57 | 182 | 4.7E-15 |
| 38 | g14414.t1 | Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 367 | 2.7E-28 |
| 35 | g14414.t1 | Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 410 | 528 | 3.9E-15 |
| 37 | g14414.t1 | Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 529 | 715 | 1.3E-27 |
| 34 | g14414.t1 | Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 747 | 1045 | 1.1E-45 |
| 33 | g14414.t1 | Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1060 | 1399 | 2.2E-46 |
| 18 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 92 | 241 | 6.1E-137 |
| 26 | g14414.t1 | PANTHER | PTHR45617 | - | 92 | 241 | 6.1E-137 |
| 14 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 187 | 353 | 6.1E-137 |
| 22 | g14414.t1 | PANTHER | PTHR45617 | - | 187 | 353 | 6.1E-137 |
| 15 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 446 | 590 | 6.1E-137 |
| 23 | g14414.t1 | PANTHER | PTHR45617 | - | 446 | 590 | 6.1E-137 |
| 12 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 574 | 697 | 6.1E-137 |
| 20 | g14414.t1 | PANTHER | PTHR45617 | - | 574 | 697 | 6.1E-137 |
| 11 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 799 | 938 | 6.1E-137 |
| 19 | g14414.t1 | PANTHER | PTHR45617 | - | 799 | 938 | 6.1E-137 |
| 16 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 937 | 1038 | 6.1E-137 |
| 24 | g14414.t1 | PANTHER | PTHR45617 | - | 937 | 1038 | 6.1E-137 |
| 13 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 1144 | 1287 | 6.1E-137 |
| 21 | g14414.t1 | PANTHER | PTHR45617 | - | 1144 | 1287 | 6.1E-137 |
| 17 | g14414.t1 | PANTHER | PTHR45617:SF69 | SI:DKEY-1J5.4 | 1241 | 1385 | 6.1E-137 |
| 25 | g14414.t1 | PANTHER | PTHR45617 | - | 1241 | 1385 | 6.1E-137 |
| 10 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 115 | 172 | 5.1E-11 |
| 3 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 187 | 246 | 7.6E-10 |
| 7 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 253 | 294 | 1.5E-7 |
| 5 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 438 | 497 | 1.8E-9 |
| 4 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 534 | 593 | 1.3E-9 |
| 9 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 812 | 870 | 7.5E-8 |
| 8 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 884 | 930 | 3.2E-8 |
| 1 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 933 | 991 | 4.5E-10 |
| 2 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 1207 | 1267 | 1.5E-10 |
| 6 | g14414.t1 | Pfam | PF13855 | Leucine rich repeat | 1280 | 1338 | 2.5E-8 |
| 40 | g14414.t1 | Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 18 | - |
| 41 | g14414.t1 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 4 | - |
| 42 | g14414.t1 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 5 | 13 | - |
| 43 | g14414.t1 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 14 | 18 | - |
| 39 | g14414.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 19 | 1422 | - |
| 102 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 115 | 136 | 6.21 |
| 115 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 139 | 160 | 7.442 |
| 113 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 162 | 183 | 5.094 |
| 95 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 187 | 208 | 5.217 |
| 98 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 211 | 232 | 6.557 |
| 97 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 259 | 280 | 6.372 |
| 96 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 283 | 304 | 5.81 |
| 117 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 308 | 329 | 5.117 |
| 94 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 462 | 483 | 6.079 |
| 101 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 486 | 507 | 6.557 |
| 108 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 509 | 530 | 6.341 |
| 100 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 534 | 555 | 6.095 |
| 105 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 558 | 579 | 5.409 |
| 104 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 606 | 627 | 5.902 |
| 93 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 630 | 651 | 4.508 |
| 99 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 655 | 676 | 5.556 |
| 106 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 836 | 857 | 6.826 |
| 112 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 859 | 880 | 5.787 |
| 92 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 884 | 905 | 6.387 |
| 119 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 908 | 929 | 7.951 |
| 91 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 957 | 978 | 6.765 |
| 109 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 980 | 1001 | 6.049 |
| 114 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1160 | 1181 | 6.672 |
| 103 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1184 | 1205 | 6.187 |
| 116 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1207 | 1228 | 6.056 |
| 111 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1232 | 1253 | 4.84 |
| 107 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1256 | 1277 | 6.495 |
| 110 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1304 | 1325 | 7.104 |
| 118 | g14414.t1 | ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1327 | 1348 | 5.001 |
| 75 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 114 | 136 | 29.0 |
| 83 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 137 | 168 | 430.0 |
| 55 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 138 | 160 | 7.7 |
| 52 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 185 | 204 | 220.0 |
| 78 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 186 | 208 | 360.0 |
| 54 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 209 | 232 | 1.2 |
| 57 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 257 | 280 | 0.018 |
| 48 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 281 | 300 | 330.0 |
| 71 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 281 | 304 | 8.9 |
| 84 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 281 | 299 | 330.0 |
| 89 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 460 | 481 | 630.0 |
| 77 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 464 | 483 | 180.0 |
| 82 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 484 | 515 | 690.0 |
| 69 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 485 | 507 | 21.0 |
| 87 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 532 | 561 | 210.0 |
| 59 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 535 | 555 | 52.0 |
| 62 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 556 | 579 | 1.1 |
| 70 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 580 | 603 | 20.0 |
| 50 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 604 | 623 | 38.0 |
| 72 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 604 | 627 | 0.6 |
| 86 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 604 | 630 | 74.0 |
| 79 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 628 | 651 | 44.0 |
| 66 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 653 | 676 | 330.0 |
| 45 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 834 | 853 | 420.0 |
| 64 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 835 | 857 | 7.6 |
| 81 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 858 | 880 | 240.0 |
| 74 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 885 | 905 | 17.0 |
| 51 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 906 | 925 | 120.0 |
| 68 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 906 | 929 | 0.13 |
| 46 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 955 | 974 | 220.0 |
| 67 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 955 | 978 | 0.01 |
| 85 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 955 | 977 | 800.0 |
| 90 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 978 | 999 | 440.0 |
| 63 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 979 | 1001 | 74.0 |
| 76 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1003 | 1026 | 77.0 |
| 61 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1158 | 1181 | 73.0 |
| 56 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1185 | 1205 | 72.0 |
| 58 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1230 | 1253 | 65.0 |
| 73 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1254 | 1277 | 0.002 |
| 80 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1278 | 1301 | 71.0 |
| 47 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 1302 | 1321 | 210.0 |
| 65 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1302 | 1324 | 45.0 |
| 88 | g14414.t1 | SMART | SM00365 | LRR_sd22_2 | 1302 | 1323 | 35.0 |
| 49 | g14414.t1 | SMART | SM00364 | LRR_bac_2 | 1325 | 1344 | 530.0 |
| 53 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1325 | 1348 | 15.0 |
| 60 | g14414.t1 | SMART | SM00369 | LRR_typ_2 | 1350 | 1373 | 360.0 |
| 27 | g14414.t1 | SUPERFAMILY | SSF52058 | L domain-like | 63 | 344 | 3.23E-36 |
| 29 | g14414.t1 | SUPERFAMILY | SSF52058 | L domain-like | 414 | 691 | 2.95E-36 |
| 28 | g14414.t1 | SUPERFAMILY | SSF52058 | L domain-like | 766 | 1040 | 1.02E-33 |
| 30 | g14414.t1 | SUPERFAMILY | SSF52058 | L domain-like | 1124 | 1386 | 2.21E-36 |
| 32 | g14414.t1 | SignalP_EUK | SignalP-noTM | SignalP-noTM | 1 | 18 | - |
| 44 | g14414.t1 | SignalP_GRAM_NEGATIVE | SignalP-noTM | SignalP-noTM | 1 | 20 | - |
| 31 | g14414.t1 | SignalP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | 1 | 18 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0005515 | protein binding | MF |
KEGG
Orthology
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
