General information for g154.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Probable multidrug resistance-associated protein lethal(2)03659.
Parent gene
- The parent gene g154 is located on chr_3: 1411614..1412682 (- strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_3 | g154 | g154.t1 | isoform | g154.t1 | 1403768 | 1412682 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon1 | 1403768 | 1403889 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS1 | 1403768 | 1403889 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon2 | 1403958 | 1404098 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS2 | 1403958 | 1404098 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon3 | 1404928 | 1405061 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS3 | 1404928 | 1405061 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon4 | 1407038 | 1407126 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS4 | 1407038 | 1407126 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon5 | 1407264 | 1407490 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS5 | 1407264 | 1407490 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon6 | 1407572 | 1407599 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS6 | 1407572 | 1407599 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon7 | 1407664 | 1407962 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS7 | 1407664 | 1407962 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon8 | 1408152 | 1408224 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS8 | 1408152 | 1408224 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon9 | 1408289 | 1408446 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS9 | 1408289 | 1408446 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon10 | 1408533 | 1408683 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS10 | 1408533 | 1408683 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon11 | 1408745 | 1409081 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS11 | 1408745 | 1409081 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon12 | 1409148 | 1409377 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS12 | 1409148 | 1409377 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon13 | 1409607 | 1409798 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS13 | 1409607 | 1409798 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon14 | 1410028 | 1411049 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS14 | 1410028 | 1411049 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon15 | 1411321 | 1411543 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS15 | 1411321 | 1411543 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon16 | 1411609 | 1411816 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS16 | 1411609 | 1411816 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon17 | 1411881 | 1412111 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS17 | 1411881 | 1412111 |
| chr_3 | g154 | g154.t1 | exon | g154.t1.exon18 | 1412603 | 1412682 |
| chr_3 | g154 | g154.t1 | cds | g154.t1.CDS18 | 1412603 | 1412682 |
| chr_3 | g154 | g154.t1 | TSS | g154.t1 | 1412887 | 1412887 |
| chr_3 | g154 | g154.t1 | TTS | g154.t1 | NA | NA |
Sequences
>g154.t1 Gene=g154 Length=3945
ATGAATAGTGATAAAAAGTCGACAAAAAGACCAGCCAATCCATATGATAAGGCGAACGTG
ATCTCTAAATACCTTTATTGGTGGCTCAAAGATTTATTTAAAGTCGGCTTATCACGTCAG
ATAATTGAGGCTGACATATACGAGAGTTGTAGGAAGCATACAAGTGATAAAGTGACGCGT
CGTTTTGAGATGCTTTGGGAAGATGAAATGCAAAAAGAAAAGCCAAGTTTAGTTCGTGTT
GCAACAAAAGTATTTTGGTTAAGAGTCATAATTGTTGGTATCATTTTTGCTTTATTTGAA
GTTGCATGCAAACTTTCAAATCCATTACTTTTGGGGTTATTGATCGGATATTTTACTAAT
AATCCTTATAATTTTTCAACAAATGATGCATATTTAATAGCAACTGGAATGGTTTTAACA
CTCATCCTTCCACTACTTTTCTTTCATCCATTTATGCTTTTTCTTTTTGATGAGGCAATG
AAACTACGAATCGCATGTTGTTCGCTCATTTACACTAAGATCTTGAAATATACAAAATAC
ACAAAAAAAGAAGGAATTGCAGGGCAAGCAGTAAATTTAATGTCAAACGATGTCAGTCGA
TTTGATTGGTTTATGAGTTTTACACATGATGTGTGGGCGCCACCTTTGGCAGCAGCTGTT
GCAGGTTATTTTATATATCAGCAAGTTCAATTTGCTGGTTTACTTGGACTTGCAATTCTT
GTTCTTTTCATGCCACTTCAAGCTTGGCTTGGAAAGAAATCTGCAAATGTACGCTTAGAA
ACAGCTCAACGAACTGACAAACGAGTCAAATCAATGTTTTCAATTATCACCGGAATACAA
GTAATCAAAATGTACGGATGGGAAGAAGCTTTTGCACGGACAATCAGCGCAATTCGTAAA
TTTGAAATAAAGGCAATTGCAAAGGGATATTACATCCGTGCGACGCTTCTTTCGCTTACA
TTTCTAACAACACTCGCTGTATTTGCCACTCTTGTTACTTATGTTTTAATGGGAAATGAT
ATTGACTCTACAAAAACATTTGTCACTATTGCATATTTCAATTACATTCGTGTAAAACTT
GTCGAATTTTGGCCTATGGCTTTGACAAGTGTTGCTGAAGGATGGGTTTCATTGAAAAGA
GTTGAAGAATTTCTGTCAGAAAAAATCAATGTTCCACAGAAAATTAATTCACAAAGAAGA
AAAAGTGTTCGAATACAATCACTTAAAAAAGGAATTTTTATGAGAAATGCAACAGCATAT
TGGAATACTGATGAAGATAATAATCAAATTGGAGTTATTTCAATTGACTTAGATACTGAA
CATGAATCGAGTTTAGTTGCTATCATTGGTCAAGTTGGTTCTGGCAAGTCAACTTTGCTT
GAAGTGATTCTTAAAGAATTGCCATTGGTTGATGGTGAAATGAGCATTAATGGTGATATA
AGTTACGCTGCTCAACAAGCATGGATCTTTGAAGCGAGTATTAAACGTAATATAATTTTC
ATAGAGGATTATGATGAAAAACGTTACAAAACTGTCTTGCGTATTTGTGCACTTGAACGA
GATTTAGAATTATTTCCAATGGGTGACGAGACAATTGTCGGAGATCGTGGAATAAGTTTG
AGTGGTGGCCAAAAATCTAGAATAAATCTTGCTCGTGCAGTTTATAAGAAGGCTGACATT
TATCTTTTAGATGATGTATTATCAGCAGTTGATGCGCATGTCGGAAAATTCATTTTTGAG
AAATGCATAAAAGAGTTCCTTAAAGATAAAATTGTCGTGTTAGTAACTCACCAACTTCAG
TATTTACATGATGTTGACCATATTTTAATAATGAATCATGGTCAGGTAAAAGCTCAAGGA
TCGTATGATTATATTAAAGAGAACAATGCTGACTTGATCTATCTGAATGAAAACCAAAAT
GATTCCACAACAATCGTTGGTACTCACGATGACAAGGAAATTTCAAACGACCCCCATCAT
CATGATGACGATAGCAAATCGATTGAGGTAGAAAGTGGCAATCAGAGGATGTCGAAGGAG
AATCAACAGGAGGGAAAAGTTACGGGTGCTATATATATGGCATATCTGAAAGCAGTGAAC
AATACTTTCTTCGTAGTGTTTGTTGCATTATTGTTTAGTATCGGACAAATTTGTCAGGGT
ATTGTTGATTATTTTGTTTCGATTTGGGTAAATTGGGAAGAAATTTATGGCAACTTGGAT
CATCAACCTGATAATAATTTAACAATTTGGGATAGTGACTGGTGGTCAACAGAGAAACAT
ATTTATGCATATACTTTAATTATCATATGCTTGCTTGTACTCATTTTGTCACGTTCTTTT
GCCTTTTATGGTATGTGTCTTCGTGTCTCAATGCACCTTCATGATCGACTATTCAGAGGC
ATCACACGTGCTACAATGTGGTTCTTTAATCAGAATTCTACAGGACGAATATTAAATCGT
TTCTCGAAGGATATTGGTACGATTGATTCCATGCTTCCTGTCGTAATTGTCGATTGTATT
CAGTTTTACTTACAATTGGCAACCATCGTAACGATTGTTGCTGTTATAAATCCTTGGCTA
TTAATACCAACATTACTCATGTGTGTTATATTTTATGGTCTACGATATGTTTTCCTAACG
ACAGCCAGAAATATTAAGAGAATCGAAGCTATAACACGAAGTCCCTTATTTGCGCATACA
ACTTCATCGATCGAAGGCCTCAGTACAATAAGAGCATTCAATGCAGAAGTACAATTACGA
GATGAATTTTATGAATATCAAAATGTAAATTCATCTGCTTGGTTTCTGTTTGTTGCAACA
TCCCGAGGATTTGCTTTTTGGCTTGATATCATTTGTGTTTTATACGTGACTTGCGTTGTT
TACAGTTTTCTTTTGCTTGGTTCAGAATTTATTGGAGCAAATGTCGGTCTCGCCATCACG
CAAGCCATCAATCTTATTGGCATGTGCAACTGGGGTCTACGTCAAACGGCAGAACTTGAG
AACCAAATGACATCCGTTGAGCGAGTTGTTGAATATGCAAATTTACCAAGCGAACGCTCG
CTTAATACAGATCATAAAGTTATAGAGTCGATGCCGAAACCATGGCCTCAGAAAGGTGTA
GTCAAATTTAATAATGTGTCGGTTAAATACTCGGAAGACTCAGAGTATGTTTTACATAAT
TTGAATTTTACGGTTTATGAGAAAGAAAAAGTTGGAATAATTGGTCGCACAGGCGCTGGG
AAGTCATCAATAATTCAAGCCATCTTTCAACTTGCTTTCGTCGATGGCACGATCGAAATC
GACGATGTGAATATTAATAATCTTGGCTTGCATACATTCCGACAGAAAATTTCAATAATC
CCGCAAGAGCCAGTGCTTTTTAGCTATGGAAGTTTAAGGCAAAATTTAGATCCATTTGAT
GAGAAGTTGGATGATGAAATATGGCATGTGTTGGAACAGGTGGAACTCAAACATACAATA
AAGTCTCTAACTGGTGGCCTTGAAACGAAAGTCTCAGATGGTGGATCAAATTTTAGTATG
GGACAAAGAGGGAAACAGAAGTTCGGTGATCCTTGTGAAACAACACAACAATGCGGCTTT
TCAGGTTCAGTGTGCGTGAACAAAGAGTGTGCCTGCGAACCAGGATTAGAGGCTACAAAT
CATCTTGACAAATGCGGGAGAGTTGTCTCTGTAAACGAGAGTTGTTTCTTCGATGAACAA
TGTGAAATGGCAGTAGCACAAACAGTTTGTCGTGATGGACGTTGCATTTGTCGATTTGAA
AAGACGGCAGTAATAAGAAAAGATGGAGTTGTAGAATGCATAGCCATCAAACAAGATCCA
TCAACACCCGTTAGTCAAGTCAATCCAACCATGATTTTGATTCTCATCGTTATGGCGCTG
ATGTTTATCATCATTTGTGTTGTTCTGCGTCTCTTTAGCAAGTAA
>g154.t1 Gene=g154 Length=1314
MNSDKKSTKRPANPYDKANVISKYLYWWLKDLFKVGLSRQIIEADIYESCRKHTSDKVTR
RFEMLWEDEMQKEKPSLVRVATKVFWLRVIIVGIIFALFEVACKLSNPLLLGLLIGYFTN
NPYNFSTNDAYLIATGMVLTLILPLLFFHPFMLFLFDEAMKLRIACCSLIYTKILKYTKY
TKKEGIAGQAVNLMSNDVSRFDWFMSFTHDVWAPPLAAAVAGYFIYQQVQFAGLLGLAIL
VLFMPLQAWLGKKSANVRLETAQRTDKRVKSMFSIITGIQVIKMYGWEEAFARTISAIRK
FEIKAIAKGYYIRATLLSLTFLTTLAVFATLVTYVLMGNDIDSTKTFVTIAYFNYIRVKL
VEFWPMALTSVAEGWVSLKRVEEFLSEKINVPQKINSQRRKSVRIQSLKKGIFMRNATAY
WNTDEDNNQIGVISIDLDTEHESSLVAIIGQVGSGKSTLLEVILKELPLVDGEMSINGDI
SYAAQQAWIFEASIKRNIIFIEDYDEKRYKTVLRICALERDLELFPMGDETIVGDRGISL
SGGQKSRINLARAVYKKADIYLLDDVLSAVDAHVGKFIFEKCIKEFLKDKIVVLVTHQLQ
YLHDVDHILIMNHGQVKAQGSYDYIKENNADLIYLNENQNDSTTIVGTHDDKEISNDPHH
HDDDSKSIEVESGNQRMSKENQQEGKVTGAIYMAYLKAVNNTFFVVFVALLFSIGQICQG
IVDYFVSIWVNWEEIYGNLDHQPDNNLTIWDSDWWSTEKHIYAYTLIIICLLVLILSRSF
AFYGMCLRVSMHLHDRLFRGITRATMWFFNQNSTGRILNRFSKDIGTIDSMLPVVIVDCI
QFYLQLATIVTIVAVINPWLLIPTLLMCVIFYGLRYVFLTTARNIKRIEAITRSPLFAHT
TSSIEGLSTIRAFNAEVQLRDEFYEYQNVNSSAWFLFVATSRGFAFWLDIICVLYVTCVV
YSFLLLGSEFIGANVGLAITQAINLIGMCNWGLRQTAELENQMTSVERVVEYANLPSERS
LNTDHKVIESMPKPWPQKGVVKFNNVSVKYSEDSEYVLHNLNFTVYEKEKVGIIGRTGAG
KSSIIQAIFQLAFVDGTIEIDDVNINNLGLHTFRQKISIIPQEPVLFSYGSLRQNLDPFD
EKLDDEIWHVLEQVELKHTIKSLTGGLETKVSDGGSNFSMGQRGKQKFGDPCETTQQCGF
SGSVCVNKECACEPGLEATNHLDKCGRVVSVNESCFFDEQCEMAVAQTVCRDGRCICRFE
KTAVIRKDGVVECIAIKQDPSTPVSQVNPTMILILIVMALMFIIICVVLRLFSK
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 42 | g154.t1 | CDD | cd18579 | ABC_6TM_ABCC_D1 | 92 | 381 | 3.94777E-84 |
| 43 | g154.t1 | CDD | cd03250 | ABCC_MRP_domain1 | 414 | 615 | 2.31481E-98 |
| 13 | g154.t1 | Gene3D | G3DSA:1.20.1560.10 | - | 69 | 390 | 3.3E-14 |
| 11 | g154.t1 | Gene3D | G3DSA:3.40.50.300 | - | 433 | 664 | 2.5E-61 |
| 14 | g154.t1 | Gene3D | G3DSA:1.20.1560.10 | - | 668 | 1020 | 8.5E-36 |
| 12 | g154.t1 | Gene3D | G3DSA:3.40.50.300 | - | 1024 | 1189 | 4.6E-46 |
| 58 | g154.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 654 | 670 | - |
| 59 | g154.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 654 | 682 | - |
| 5 | g154.t1 | PANTHER | PTHR24223 | ATP-BINDING CASSETTE SUB-FAMILY C | 3 | 1183 | 0.0 |
| 6 | g154.t1 | PANTHER | PTHR24223:SF324 | LD17001P | 3 | 1183 | 0.0 |
| 1 | g154.t1 | Pfam | PF00664 | ABC transporter transmembrane region | 90 | 357 | 4.4E-21 |
| 4 | g154.t1 | Pfam | PF00005 | ABC transporter | 442 | 565 | 2.6E-16 |
| 2 | g154.t1 | Pfam | PF00664 | ABC transporter transmembrane region | 744 | 969 | 5.9E-31 |
| 3 | g154.t1 | Pfam | PF00005 | ABC transporter | 1058 | 1185 | 1.4E-19 |
| 16 | g154.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1 | 84 | - |
| 37 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 85 | 118 | - |
| 27 | g154.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 119 | 129 | - |
| 38 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 130 | 156 | - |
| 20 | g154.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 157 | 202 | - |
| 40 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 203 | 225 | - |
| 22 | g154.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 226 | 230 | - |
| 41 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 231 | 250 | - |
| 21 | g154.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 251 | 270 | - |
| 30 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 271 | 287 | - |
| 25 | g154.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 288 | 309 | - |
| 34 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 310 | 336 | - |
| 19 | g154.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 337 | 702 | - |
| 35 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 703 | 722 | - |
| 23 | g154.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 723 | 760 | - |
| 36 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 761 | 786 | - |
| 18 | g154.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 787 | 829 | - |
| 29 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 830 | 853 | - |
| 28 | g154.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 854 | 858 | - |
| 32 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 859 | 878 | - |
| 15 | g154.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 879 | 943 | - |
| 33 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 944 | 964 | - |
| 26 | g154.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 965 | 969 | - |
| 39 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 970 | 993 | - |
| 17 | g154.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 994 | 1290 | - |
| 31 | g154.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1291 | 1312 | - |
| 24 | g154.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1313 | 1314 | - |
| 57 | g154.t1 | ProSitePatterns | PS00211 | ABC transporters family signature. | 540 | 554 | - |
| 60 | g154.t1 | ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 91 | 356 | 23.754 |
| 62 | g154.t1 | ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 403 | 638 | 19.361 |
| 61 | g154.t1 | ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 706 | 1001 | 31.731 |
| 56 | g154.t1 | SMART | SM00382 | AAA_5 | 442 | 615 | 7.7E-9 |
| 55 | g154.t1 | SMART | SM00382 | AAA_5 | 1067 | 1312 | 8.7 |
| 8 | g154.t1 | SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 87 | 386 | 2.75E-24 |
| 10 | g154.t1 | SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 405 | 630 | 3.68E-48 |
| 7 | g154.t1 | SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 703 | 1018 | 1.57E-51 |
| 9 | g154.t1 | SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1031 | 1184 | 3.4E-33 |
| 52 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 84 | 118 | - |
| 49 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 133 | 155 | - |
| 47 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 229 | 251 | - |
| 48 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 314 | 336 | - |
| 54 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 703 | 725 | - |
| 46 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 760 | 782 | - |
| 51 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 834 | 856 | - |
| 53 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 860 | 879 | - |
| 44 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 944 | 966 | - |
| 50 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 971 | 993 | - |
| 45 | g154.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1291 | 1313 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0055085 | transmembrane transport | BP |
| GO:0005524 | ATP binding | MF |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | MF |
| GO:0016021 | integral component of membrane | CC |
| GO:0016887 | ATP hydrolysis activity | MF |
KEGG
Orthology
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed