Gene loci information

Transcript annotation

  • This transcript has been annotated as Protein purity of essence.

Parent gene

Gene structure

  • The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.

Chromosome Gene Transcript Category ID Start End
chr_3 g3458 g3458.t1 TSS g3458.t1 25534359 25534359
chr_3 g3458 g3458.t1 isoform g3458.t1 25534373 25551094
chr_3 g3458 g3458.t1 exon g3458.t1.exon1 25534373 25534476
chr_3 g3458 g3458.t1 cds g3458.t1.CDS1 25534373 25534476
chr_3 g3458 g3458.t1 exon g3458.t1.exon2 25534775 25534872
chr_3 g3458 g3458.t1 cds g3458.t1.CDS2 25534775 25534872
chr_3 g3458 g3458.t1 exon g3458.t1.exon3 25534931 25535289
chr_3 g3458 g3458.t1 cds g3458.t1.CDS3 25534931 25535289
chr_3 g3458 g3458.t1 exon g3458.t1.exon4 25535349 25538136
chr_3 g3458 g3458.t1 cds g3458.t1.CDS4 25535349 25538136
chr_3 g3458 g3458.t1 exon g3458.t1.exon5 25538197 25538583
chr_3 g3458 g3458.t1 cds g3458.t1.CDS5 25538197 25538583
chr_3 g3458 g3458.t1 exon g3458.t1.exon6 25538765 25542412
chr_3 g3458 g3458.t1 cds g3458.t1.CDS6 25538765 25542412
chr_3 g3458 g3458.t1 exon g3458.t1.exon7 25542473 25543798
chr_3 g3458 g3458.t1 cds g3458.t1.CDS7 25542473 25543798
chr_3 g3458 g3458.t1 exon g3458.t1.exon8 25543858 25544304
chr_3 g3458 g3458.t1 cds g3458.t1.CDS8 25543858 25544304
chr_3 g3458 g3458.t1 exon g3458.t1.exon9 25544367 25548758
chr_3 g3458 g3458.t1 cds g3458.t1.CDS9 25544367 25548758
chr_3 g3458 g3458.t1 exon g3458.t1.exon10 25548821 25550114
chr_3 g3458 g3458.t1 cds g3458.t1.CDS10 25548821 25550114
chr_3 g3458 g3458.t1 exon g3458.t1.exon11 25550178 25550956
chr_3 g3458 g3458.t1 cds g3458.t1.CDS11 25550178 25550956
chr_3 g3458 g3458.t1 exon g3458.t1.exon12 25551021 25551094
chr_3 g3458 g3458.t1 cds g3458.t1.CDS12 25551021 25551094
chr_3 g3458 g3458.t1 TTS g3458.t1 25551594 25551594

Sequences

>g3458.t1 Gene=g3458 Length=15696
ATGTCAAATTTCAGCGACGTAATAAATATAATTAAAGAGAAAAGTGAGAATGGACTGCTT
TTGAGGCCTGAAACTTTCAATATCATTAAAATATTAGTCAAAAGAGAAAATGAAGTCTTT
AATCACAATGAAGAGTATAATGTATTTTTCGACCATGTTATTGCATTGGTCGCTGAAAGC
ATCGCCCAAATTCCGGTTTCGGTATCACAAACCAAATTACTGACCTTGCTTGAGGCAGTA
AATTTGATCATTCGTTACATCGTTAAACGTTTTGAAAATTCAAATGCACCGATTATTCTT
GTAAAAGCATTAAAATCACTTTGTGATGTAGATGCAAGTATGGAAAATGGACCTACCTAT
TCATCGATAAAATATATGAAATTTCCTGAAAGCTCTAAATCTACTAATGGATCTGGATCT
GATAAAGAGAGTCCAAAATCTGAAACTGTCAAAAGATCTCGCTCAGAATTGTCAATTGTC
ATCATGAATCAATTAACTCAGCCACTCACATCAGGCACTATCCCATTGACAAATTTCAGT
GAGAGTCAATTTGATTTTACTGAACTCTTTAGAAAAGAAGTTATGGATTTACTTAAATCA
TTAAATGCTAGTGATGTTTTTCTCAATTGGTGCATTAACTGTATACCAATTATTTCATCA
ACATACAGTTTAAAATTTAATGGCGATATGATACTTCAACAAAAATCATTACATCTCCCA
CAAACACAAAACGATGCACAAAATGTGAGACAATGTCTTAAACAAATAGATATTGACACC
AACAATATTCTCAATATATTGCAATTACCAATTATGGAACCATTAAACAAAACTAGAATT
CTTCAGCTTTCACAGCTTTCAATTTTGTCGCTTTATTGCTGTGTCGTCACTACTATTGCT
CATAGCATTACTATGATCTCGACCAACAGTGCTGGTACTCAAACGACTGCTCTTAAGAGT
GCCTCAACTTCAACTCAACAACAAACACAAAGTTCGTCTTCAAATACTAAAGAGTCTCAA
TCAATTGCAGTGGAAATTGATCCTTTTGAAGAAGTTTCACGAAAAGTTGTCAATCAATCA
TTGGAAATATTTAAAAATGTCAATGAAATTTTTAAAAAGCATGCACAGACAAATATTTAT
CAAAATCATGTGTGTTTGGGTGCATGGATTTTATTCACTGGTATTCAAGGAGCAATGAGT
GTTAGCGGTTCAAAGTCACAAACACAATTGCAAAGCGGTTCATCTGATGAATTTGTGAAG
AGTAAAAGTCCATCACGTCATGTTGATTCAAATATTCCACCTGCACCTCAACCGAGAGTC
AATTTATTTAAAGTGCAACAAGGCTTTTCAGTTTTGAATGTATTGATTGCAAAGTGTGGT
ATTCAATTAATGGAAGAACTTTTGAATGAAATGAAAGTTGACAGTGGCAATGGTCTAGAT
TTAAAATTAAATGAAGATATTCTAATTGCACAGCAACAGCATTTGTCACCTGAATATATC
AATTTCAACATTATGAAAACATATACATCAATTGATCGTATAATTTGCGCTTTTAATGGA
ACGAATATTCAACAACTTTTGACTTTTCTTGCCACTATCTCTTATAGAAAAGCTTGTTCA
CTTAAGCTGACTGAATTTGGTGGTGAGCAACTTAGTTACAGTGATTCAACAACATATTTC
AATGATACATTATCTTGTTCCGAAGATGATTCTGAGACAGAAGAAGATGGGGAGCAAGAT
GAAACAGAAGAAGATAGTAGTGAAGGATATTTGGGGTCATGGTTAAAGGAAGCTCTTTCA
CCAGAGGCAAAAGATGCCACTAAAGATGATAATGATAAACAAAAACAAGAAGAAAATCAG
AAATTGGGTTTACAATATGCTAAAGATGAACCACATGAATATCTTGAATTGGCATCACAA
ATTTTTCAATTTCTCGATGCAAAACTTGGCGATGCAGAAAATAAAATTCTCATCAAATAC
ATGCGTCACGGTTTGAGTGAACAACAAATGATTTTACTAGCAAATATATTAAAAGATCTT
GATTCGGATGCACAAATTAACAATATTAATTCAACTGTCACCGTTTCTTCTAACAACGCT
TCTTCAAATGATGCTACAAATGCAGCAATACAATGGCGTTCATCAATGATGAAATTTTCA
AGTTCAATCGGAAAATATATGCACAATTTGATTTCGAATTCATTGCTTAATGAATCATTA
CAATCACTTTTGCTTCAAAATCTTGGAGTTAGTCCATGGGCAAATGATTCCAACACTTGG
CCTTTGGAAGTTTATTCAAGAATTCTTGCAGTCGTAGTGCAAATTTTGATTTTAAAACCA
AATCAGGAGAAAGAAGCTGCATGTCTTTCTGTATGGCATCGTCTTGTAAACACACTTGTT
GAAGGAGTATGTGGCAGCAATGTTAGCCAATTTGATGAATATGACGATTTAAATATTGAA
CATGCCCAAATTTTATTGTTTCTCTTTCATTCATTAAATCTGATGCAGAAAAAATCAATA
TTGCTTTTAGTTGCTGGTGGTGTCATCAGATGTGCAGAAGTTTGCCGAACACCAGAAAAA
CCATTACGTGATGCTCAGTTGATTTTATTGTCAAGACTTTTGCTTTTCCTCGAATATTTA
ATGAAACATTTATATAGTCCACCTGAAATTCTTTTAGAACAAGTTAGTTGGAATCTATTT
AGCATCTTCACATTGGATTCTGAAGAAAAGTCTGCCGGTCTTATGAATTATAAAATGAAA
ATGTCAATGTTTTGTCGAAAAGATTTGGAAGAAAAATACAGAAAGTTATCAACTGTTCAC
GATGGCATAACAATAAAGCCAAAATTATATTCATTAACTGCTATTGATGCTTCTAAACAA
AATGAATTTAAACTTGATGGACTTGCGTGGAATTTTATACTGTGTACTCCAGATAAAGTG
AAATATCCAATGTTGATTGATTCATTAGTCAGCATTTTGAATATTACAGACATGAGCACA
TATAAAGTTCCTCATCATTCACAATTTGCGACATATTATTGCTTTAGTCTTGCATGGAAG
CTTCTTTTAGGTCTTCCTCCATCAACACAACATGTTGAGAATTTGATTAGTTTAGAAGAT
AAGCAAGTGAACTTGCATACTTTACTATGGTCTACAAGATGTTTGAAACCAGTTACAAGT
GGAGTTCATGCACACAATTTAATCGTTGATTGTTTGATTAGACAAGGAATGTACACACAG
GCGGCTGAGACTATGTGGAGCAATTTAACTGAGAAATTAAATGATTATAACCATATATTG
ACTGCATCGAAAATCGGACTTGATTCATTTTTACAAACTTTCCAAACACAAACACCTCGT
CTGTCGAAAATCATCATGCTTGATAGTTTGCTTTCACATCTCTACTACTATCAAACACTT
GCTGCAAATGGAGAGGCAAAAAATAAGAATGATGAACAAGCTGTTACATCCCGTCATTCC
TCCAATATTGACGATAATTTGAGTAAAAATTTGTTAGATAAACTTGTTCAAACGCTTGAT
TTAATGATGAATGTTTTTAACAAAACTATGACGCAAAGTTTGAGCGGACAAGTTCCTCAA
AAAGTTTTAGACTCTATAATTGCAATATCAGGAACGAATAATAACATTTCTGGTGACCTT
TCTGAAAATTTATTAAGAAGCATTCAGAGTTCTGATAAAGAAATTTTGATGGAATGGAAT
TCTAAAATGAACAAAGTTAATTTAGGTGACGACACAAACATTCAACAACCTGAGCAAATA
ACATTGAATATTGTTGAAGCACATTTAGCAGAGATTTATCGTCATCAGAATTTCTCTATG
GTGCTTTCACTTAAAAGTGCAATAAGAAGTCTTATTAATTGGATAAATTATATGCTGCCT
CATTTTGACAATGCAAAGGTGGATTTGAAATTACAAGATTTACTCGTTCAAATGCTTTTC
GATATTCGAACTGATTTCATTTATGATTCAATCAGTAAATGTTTGCAAACATTGATTGGA
AGTGATTCAAATTCTGAAAATTATCAATTACCCATTTATATTCATTTAATTCAACAAAGT
TACAATATTGTCGTGGAATATTGTGATGCAAGTTTGATTGGTTCAATAAAATCAATTAAT
ATCGATGAATCAGCATTACATGATATCATTCGTTTTTGGGAAAGCTTGACAGAAAAGTCT
AATGGATTGAAGGCACTAAGAGAATTTTTTTATGAACGAAAACAAGGAAATTTAGTTAAT
ATTCTATTGTCATTTAGTGGCACAAATTTGACACAACAATATAGTCAAAATGTATTGAAA
TTTTTTGAAAAACTTTTCCAAGTTTCTGAAAACATGGACTCATCGTATTCAATTGATGAA
GTGTGTGCATCACTTTCTGATTTAGGTACAATCGATTCAGTAAAATTGAAAAACTGGTTA
AGTCATATTTTGCTTGGACCAAAGGGAATTTCATTGGAAGGTGCTATTTCAAGTGCAACA
TCAAGCAATTTTCCCACTCCCACTAATCTTGGCACTCAATCTTCTGCGCCATCATTAACT
ATTGATAGAAAATCAGGTCCAGAAGCAGAAGCAATGGAGGTAGATGAAGAATGTAGATTA
CCATCAATTACAAATTGGACAACCATAGCACAATCTTCTTCAAATGATCAAGCCGTTGGT
GGTGCATTAGAAAATGTTGAGAATAATGGAAAATTATTACAGACTTTGACTAAATATCTG
GTTGCTGAAAATCGAGTATCGACAAATGTCTCACAAGCACTATTTCAAGCTATGCTACAA
TTGAGTAACAGTTTACTTACAAACACAGCTAGTGAATCTGTATTGAGTGATTTCACATCT
CTTTTCAATGTCATCGTTACACTTGCTGATGCTGATCAAGGACGCGGTCATTCTGCTCTT
TTCGCTTCAACAATTGAATGGTTTGAAATTTGTAAAAATAGAATTTTAGAAAAATATAAC
AAAAATCAGCAGTCAGCATTGAGTACTGGCAATGCTGTAAAAGTTCAACTTGATAATATC
ACAGCATTGTTGAAATATTTTAGTGATTTACTCACTGGAATCAATGGTCAACAGAGACCT
CTTTCAAGCATTTGGGAAGACGATATTGCATTAGATATTGAAGAAATAATTGCAAGTGAG
CGTGATGGTGAAAATGACGAAGGAGAAGCAACTGCTGAAGATTCTGATGAAGACACAAAT
AATAAATTGTGTACTTATACGATTACTCAAAAAGATTTTATGAATCAACATTGGTATTGG
TGTTATACTTGCAAAATGGTAGATGATAAAGGATGTTGTTCAATCTGTGCACGAGTTTGT
CACAAAAATCATGATGTTTGTTATGCAAAGTTTGGTAATTTTTATTGTGATTGTGGTGCA
AAAGAAGATGGATCCTGTAGAGCAATGAGTTTACTTGATAATAATGGAACTTCATCAATT
CCATCGTCAACTACAATGGATCATGGTGAAATTCTCGTTAGTTCATTAAAGAGACAAACA
TCAAATACTATACAACCTTGCAGTGATATTCTTAATTTAATTTGTAACAAACCTTCATTG
GCAAAAATTATTGACGCATCTAAAGACCAATTGAGCAGCGTAGACATGTGGAGAAATGTC
CTTAAGTGCTTGTTAAACTTTTGTAATAGTCTTATTCCTATTGTGAAAGAAAATTGTGCA
AAATATTCAACAGTTGGATGTCATTTGCGGGCTAAAAATGCGCTTGAAAGATTACATCAG
CCAGAAAAAGCTTTCAGTTATAGTGATCAAGTTATGATAGCAACACTTGGGTCGCAGGAA
GGAGCGTTTGAAAATGTTCGTATGAACTATTCTGGTGATCAAGGTCAAACTATTCGTCAA
TTACTTTCATCAAATCTGATAAGACGTGTTGCCCTCTGTGCACTTTCATCACCTCATGGA
AAACGTCAACATCTTGCTGTATCACATGAAAAGGGAAAAGTAACAATACTTCAGCTTTCT
GCTTTGCTTAAGCAAGCTGATGCTGCTAAAAAGAAATTGACGCTTACTCGTTTATCATCC
GTTCCAATTACATGCAGTGTTTTATCACTTTCTGCTAATCCTGCTAATGAAGATTTTTTG
GCTGTATGTGGTTTGAGAGAATGTCATGTTCTCACTTTACTGCAAAATGGAACTGTCAGT
GAACATATCGTTCTAACATTGCAATTGGACAATGGAAATTATTTGAGAAGAGCCATTTGG
TTGCCTGGATCACAAACAAAATTAGCACTTGTCACGGCTGAATATGTCAAGATTTATGAT
CTTGCTGAAGATAGTATTTCACCGCTCTACAATTTCGTAATACCATCAGGTGATATTCGA
GATGTTTGTTTTGTTCTTCAAGAAGGCAATTATTATCTTCTTATTATGTCATCATTGGGC
TATATTTACACTCAACATTTGAGTGATGAGAGTTTAGCAGTTCATGGACCATTTTATCTC
ACAAATACATTAGAGCTAGATCATTCTTATATAAGGGATGTAAATGGACAAATATTAGGA
GGTGGTGTCTCAATTTACTATTCACATACACTTCAGTTGCTGTTTTTCAGTTATGCAGCT
GGAAAAAGCTTCATGGCACCCCTTGTTGATGTAAATGAGGGTGTGAAATGTGTAGTAAAT
CTCTTACATTCGTCAAAAGTCTTCTCAAAAGGCGGTAGTTCAAATGGCTCACAATCACCA
TTATGTCAATGGATAGAAATTCAAGGACATCCGGGATTAATTTGTGCTATGCAACAGACA
ACAAACAATCCAGTCATTTTTATGCTTAAACCTGATGGCTATCAAGTTCAAGAGATAAAA
GCACAAAATTCAAAAGCAAAAATCATGGATATTGTTGCTATTCGTCATCAAGTTAGTGGT
ATTGAAAAAACAACTTTGATTTTGTTGTGTGAAGATGGTAGTTTAAGAATTTATGCGGCA
AATCCAGAGACAACAAACTATTGGTTATCATCAGAAATTCAGCCAATCGGAAACTATTAT
AATTCTGGAATTCTTGTCAAAGAACGAGGCGGAACTAAGAAAAAAACAAAAAAGACCAGT
GCCAATAAACAAATTCAAAAATCTCAAGCAACTGGGCCTAATCCTATTTTCCCCGTTGAC
TTTTTTGAACATTGCACAGCACTTCATGATGTTGAATTTGGAGGTAATGATTTACTGGAG
ATTTATAACTTACAGCAGCTACAACATCGTTTGAACTCAACTGGACTTTATGTTGCATCG
ACACGTTTTAATGGATTCACATTAGAAGTAACTAATAAAGACACAAATATGGTAATGACT
GGAATAAGATTTTTAATTGGAACACAAGATTCTTCACGAGCTCCATCTGCCGTAACAATA
TTGGGTCGAAGAATTCCAACAATATGCACAACTGCAAGGTGGTTCGCAATTCCTTTAACT
CGAGAAGAAAGTTTGCAATCTGATAAAAAGTTGAGCATTCATTTTTCACCATCCAGTGAT
CCTGAATTTGTCACTAAGCTCGATTCAATTAAGATTTATGGAAAAACTAAAGAGAGTTTT
GGTTGGCCTGATGAAATTTTCGATGAGAATGTTGGTTTAATCGGTCAATCGAGTTCTCAA
ATTCAAGAGTCATCTGAAACTGATAATCAATCATGCAATATTACATCTTTGGATAAAATG
ATTACAGGAATGTTGGATGTTGTAGACAATGGTTTCTATTTCTTGGGTGGTTCTACAGTT
GATTCAATTTTAAAGCAAACAGCCATTGACGTAACAACTTCTTTGCTTTTACTACCAACA
CCAGGAGTTGTTCAACAACTATCACGCTCAGTTTTGGCTACATTACATTCAAATAAATCA
CAATATCATCAATACAAAGACCGCGAAATATTAGGAGATGTTTCAAAAGAATTACAAATT
ATGTTGAGTGCTACCAACTATAGAAACATTGATCCTGAAGGATTTTATCGATTGGTTCTT
TTAGTACGCAATATTGCGCTTCAAAGACCACAACAATTGACTAAAATTTGTCAAGAAAAT
CAATATCCAATTGTGACTTCTCTCATGGCATTGACAAAAGAGCTACATCAAGTATCAACA
AATTATGAAGATGTAGCATGTTCAATTGTTCATTTTGGTTTAACTCACAAAGAAGCAATT
CAATCGCTCATCGAAATCCTCTATGCATTCATCTATACTGATAGTACAATGATAGATTCA
ATGATTAAATTCATTGTTGAATTGTTGCTAGATAAAGATCCACAAGTTAGTCATAGCGCA
AAATATGCAATTATTCGTATTCTTCGACCAAAATTTAAACGACAAAGAAAAGTTTTGATT
GAATCGACAACACCACCAAGTTGTCAAACACCAACTCCACAATCAGCACCCACATTAATT
CAAGAAGATATTTCTATGCAAAATAATATTCAAGATGTTGATTTGATTGAGCCACTTGGA
TTAGTGGCAGCAGGAGGAGCTGAAAATCGTGATTTAGTTGAACCATCTCTTGAAGCTCTT
TTAGGAATGGCTGCTGGAAATGTTCCTGCCGCAATCGGTGGTGTTGGACGTGATATTCAT
GGTGAAGCTCTTATGGAATTCGCTCTTGAATTGTATTTGCAAGAGTATGAGGGTGACATT
CAAGCTTTCCAAGGATTAGCCAATCGATTAAGAGGAAATCAAGCTTTTCAAGCTGTTGCA
CAAGTTGGAGGTGCTCAAAATCAACCACGTGTTAACAATTCAGCAGGTGGTTCAGATGAT
GAAGAATCAAATGCTGCAACAGATGGTTCTCGCGATGTGAATCAAATGCAACAAATGCTT
GTCGCTTCACCTAGCAACGAACAATTTATTGATAACACAGCAGATGGTGGTAACGGCTCT
GATGGAAGTGGAGCTGAGTCGATTGGAGGAAGAAGTTCAAATTATGATGAACCTTTAGTT
ACATCTACAAATTCTCCACCGAAAATGACATCATCAAAACTTGAATCAGTCAAAGATGAA
GAAGATTTATGTGAACAAGAAAATTCTGCTAAACTTCACCAAATACGTATTGCCATTCTT
GAAAAAATGATTGAAAACTTTAATGCAATAGATAATGTTAATGGTCGTCAAGTGATTCCT
TTCATGCAAGTTATTTTGATGCTAACAACAGATCTCTATCTTGATGGCTCGCAAGAAAAT
GAACGAAACATCATGACAAAATTGCTGAGTACGTGTGTAGAAAAGTTAGAAATGAATCAA
TCATCACCTCCCGCCGCACAACTCTCGACACGCTCACCAAAATCTGAAGTTCAATTGATT
ATGTTGCGTTTCGTTGGGATTTTAATGGGAAAAATGAAAACCTTATCATCTAAATCGAAT
TCATTAGCGTCAGCATCTACAGCAACAATTGACAATATTCAATTTGTCGCGACATCGACT
GCAAAACATTTAATGCAAAGTGGAGCAATTTCATATTGCTTAGCAATTCTCGAATCATTT
TTGCCTTATTGGCGTCAAAATTCTACAAACGATCCAAATTCACCTCAGCAAAATACTGCA
AATGGAGCTCATATTGTTACATCTAATGGAATGACAACAAATACACTTTTGAAACCAACA
TGTTATGGCCCAGTTCCTGATATGCAGCCATTCTTTGCTCGACAATATATCAAAGGATTA
TCGGATATTTTCGAGTTATATCCACAAGTTTTAACAGAAATGGCAGTTCGTTTACCATAT
CAAATTCTCAAATTGACAAATTCTAATGCAAATCAACATCAACATTCGTATGACTCTGCA
TTGACATTTACTCTATGTGAATATATGTTGCATATGCAATCGCCTTCTATCCGTCGTCAA
GTTAGAAAATTGCTACTATACATGTGTGGAAACAAAGAACGTTATAGAAAATTGAGAGAC
TTGCATTCATTAAGTGAGCATATGAAAGCAATAAGAATTTCTCTGAATAGCACTGGCTTG
ACTTATCAAGTCTTAGTTTCATTAATGGATCATTTAAAAGCATGCTATGAAATTGCATCC
GCTCGCACTGGAAATTGGCAAAGATTTTGTCTATTGAATACTGATGTTTTGTCCTCATTG
TTGAGTTTGAGCTGCCAACATTTGGATCATGAGATATCAACAATTATTTTGCAATTATTG
CAGGCTGCAGTTGTAAATGTTCAAATTTCAAATAATTCAAGTGGTCAAATTAAATCTAAA
GACCGTAAAGATCGAGACAAGAGTGAAGAACTCGATAGTTTGGGAAATGAGACTAAATTC
GACCCAGCCAACTGTAATTTACTCGTTCAACAAATTTTCAACCAAGTCTCTATTCCGAAT
TTGTCACTTTTCATTAAGACTTTCCTACTCGAGACAAATAGCATCAATATTCGTTGGTTG
GCACATGGCCTTATTTATGCATTTTATGAAAATTGCAATGAGGCAAATAAAACAAAATTG
TTAGAGGTATTATTTGCTCTATGGCCACTTATCCCTGTTTATGGCAAACGTACTCCACAA
TTTATTGATCTTATTGGCTTTTTCACACTCAATACAAAATCTGCAGTTCATTTGTTGCCA
GAGAAAATTTCAAAAGCGGTAAAATTATTGAGAGAACAAAATGAATTTGTTGCAAAACAT
CCATCAGCATCTCTTTATACATCACTCAGTCAGGTACTTGATCTAGATGGCTTTTATTTG
GAATCCGAACCATGTTTAATTTGCAACAGCGTTGATCAGTCGTTTAATATTATTAAACTA
ACATCAATTAAAATGGATTCAAAATTTACTACAAACTCAAATATTATTAAACTTGTCAAT
GCTCACATCATATCAAAAATCATCCTGAGAATTGGTGATTTAAAGAGAACAAAAATGGTA
CGCACTATTAATGTCTATTATAACAGCCGAAATGTTCAAGCTGTTGTTGAATTGAAAAAT
CGTCCATCAATGTGGCATAAGGCTAAATCTATAACACTTCAATCAGGTCAAACTGATGTT
AAAATTGAACTCTCATTACCAATAGTTGCATCTAATTTGATGTTTGAATATGAAGATTTT
TATGAAACTGTAACGAGCTTGCCTGAGAGTCTTCAGTGTCCACGTTGTAGCGCAAATGTG
CCTGCTAATCCTGGCGTTTGCAATAATTGTGGAGAACATGTTTTCCAATGTCATAAATGC
CGCGCAATTCATTATGATGAGAAAGATCCATTCATTTGTCAATCTTGTGGCTTTTGTAAG
TATGCTAAATTCGATTATAGCATCTATGGTCGTCCAACATCAGCAGTCGATGCAGTTGAA
TCGGATGAAGATCGTGCAAAAACTGTTCAAACAATTAATAACTTGTTAGAGAAAGCAGAC
AAGAGTTATCGTGAATTAATGAATGTCCGTCAGTCATTGGAATTGCTGATTCCAAAAATA
GCAGATGGTTCAATTGCAAATGATTTAGTTGCTGGGAATATTTCAAGTACAATGCATATT
AATAAAATTGTTCAGCAAATGGAGAAGAAATATTGTAATGAGGGTCGAACACATTTTGAA
GATTTGACCAAGATCGTGCAGAAAATTCAAGCGTGTCGTCGTGAACTCGTTGCATATGAT
AAATTACAACAAATGGATTCAACACCAGTTACTTCGGTTATTATACCTACAGAGTCAACT
GATATAGTTCATAGCAGATGCTACGGTTGTGCATTGGCTTCAATTGAACAAATTTTAACT
CTTTTGAGAGGTATGTCTTCGCAAATGCAATCACGTGTTTTGTTATGTAATGAAGGTCTG
ATTGAAGAACTTGCAACCAATAATATGCGACATGGAACGGATCAAAAAATTCAAGAAGAA
GTTCGCAACTTGCTTTGTTTATTAACACGCGATTTGCCTGAACCCACAGAACGTCTTTGC
AATTTGTTAAAATCTCGCGTGATTGCTGCACTCGACGGAAGTGTTCCATTATCTAATTTA
GATAATGCAGTTCGAAATGAAATGGCTTTGCTTGAGGCAATGGCACTACAAGAAGATTCA
TGTTGGCAAATGAAATTAAAGCCTATTATTGAGTTATTTAAGAGAGCAAGTAATGATTCA
AGAGGACCGGCAACTCCAATTGTTCAGCCCTGTTTGCGAGTTATTCAATACATTTGCAAT
CCACCTATGCCGACAAGTAAGAAAAATAAAGGCAAAACAACTTTGGAATTGTGTACTGTT
AAGCCGAGTGAAGGAATTTCGGTGAATACAACAAAATGGTTAGAAGGTGATAAACAACAC
ACGTTTGAGGCATGGAAAAAACGACAATCTTCAAATGCATCAATATCGCAACTACCAGCA
AGTGATTCTAAACCTAAAAATGAGACATTTATGGCAGTAATGGATGAAAAACGTCAGCAA
ACTCGTCGTATATATCTCATGGAAAAGTATGGACATCGTTGGCATTTGAAGACAATCAAA
AAACATTTGCATCTTCCATTGAAATTGATACCGAGCTATTTGCCAAGCATTTTGTTCCAC
CCAACATCACGTTTAGTTCGTGTAAACGCATGTTCCTTGGTAACTTCATGGATGACAACT
CATGAAAGAAAACTTCATTTGCTTAATTTACTCACTTGCTTTTTAAAATATGTGGGCGAA
GCTGGTGAAGCAAGCTCCGAATTTATTGACTTGTTCAAGCAAATTGCTCAAGAACCACCA
TATCGTCAATATCTTGCTCTCAATAATGTCATTACAAAAATTGCTGATTTACTAAATCAA
GAATTTGAGAAAATTTACAAGCTCGAAGAGTCAACAACATTATCAACTGATTTGGGACAA
GGTTATGCATTGAAGCAATACGTGGATTTGATTTCAATGTTTTTGGATAATCCTCAAATA
AGAAAATCATATAAAGGAATTGTTCTTCAAAGTATAATTCAAAGTTACTTGAACCTTCGC
AAACTTGTTGTTCAACGAACTATGTACATTGATGAAGCTCAAAAGAGTTTGATGAATTTG
CTTGAAGAACTTACGAGTGGAACTGAAGAAGAAACAGCATCATTTATTACAATTTGCATC
GATATTGTTCGTAAAACTCCAACAAATGACATGAAAACTCCGTTATTTATGTTTGAACGA
CTTTGTTCGACTATACATTCAGAAGATTCTGACAATGATGAATTTTTCTTGAATTTAGAA
AAAGATCAATTGCAAGAGGAATTTATTCAAGGAAGAATGCTTGGAAATCCTTATCCATCT
TCAGAGCCAGGTTTAGGTCCTCTTATGCGAGATGTGAAAAATAAAATTTGCTTTGATTGT
GAGATTATGGCAATGTTAGAAGACGATAACGGAATGGAATTACTTGTTCACAATAAAATA
ATCAGTTTAGATCTGCCAGTTAAAGAGGTGTATAAGAGAGTTTGGCTAGCTGGTGGTGGT
GAGCGTGATACGATGAGAATTGTTTATCGTATTCGTGGATTATCTGGAGATGCTACTGAA
GAGTTTATTGAAAATTTGAAACCTGTAGCTGCTGCTGAAGAAGACAATGAGCAAACTTAT
CGAATGGTAAATGTTATTGCTGATTGTAATGGATTAAAAGTTATTTTAGATCGAATGAGT
TATCTTCAGAATGTAAGCAGAGCAAAACCATTTTTACAAACACTTTTAAAACTCTTGCTT
ATGTGTGTAAAAGTCAAAAAATGCAGAGAAGAACTTTGTCAACCAGAATTGGGAGCAATT
TCAAATCTTCTCAAAGTTCTCCATCTCTGTTTACAACATCAAGTTCAAGAAAATGATCCA
CAAATGTCGACGATAACTGAACAACTTCTTGAAATTATGGAAACAATTCTTGCTAAAGCT
GCATCTGATTCTTTGGATTCATTTTTGCAATTCTCTTTGACATTTGGTGGACCAGAATAT
ATTGAAGCATTACTTTCATGCACTAATCATGCAAATGTTCGTAATAATCCTCATGTTCTC
CGTTGTTTGATAAGAGTTGTCGCGGCTCTTGTTTATGGAAATGATATTAAAATGGCATTG
CTTTGCGATCATTTTAAAAATTCCTTTGATTTTGAGAAATTTGATCAAGAGAGAACAGCA
GAAGAAGAATTTCAGCTTGAGCTTTTCTGTATTTTATGTTCAGCAATTGAAAGAAATACT
ATTGGTGGAATTCTAAAGGATTATATCATGGGTCTTGGCATTGTAGACAAAGCTGTTAGT
TATATTGTTAAATATGCACCGACAAATCGTTTAATTTTACTACCATTTGCATCATCATTG
GATTCTGATGAATTGAAATTATTTATTTCAAAGCCTTCATTGAAATTCATTCTTCAATTC
TTGGCTGGTTTAGCAACAAAACATGAAAAAACTCAATTAGTTGTTGCAAAAGATCTTATA
CCTGTCATTCATCAACTAGAGCAAGTGTCATCAGATGAACACGTCGGAAGTTTAGCAGAA
AATCTTCTAGAGGCTTTAAGTTCAGAACCTGCAACGGCAAAGGTTGTACAAGAATACCGT
GATTCAACGAGAGCTGAAAAGAAACGTCTTGCAATGGCAACACGAGAAAAACAATTGAAT
GCACTTGGCATGAAAACAAATGAGAAAGGACAGGTGACTGCAAAAGAACAAGTACTACAA
GAACTCGATAGTGCAATGGCCGATTTAGTCAAGCAAGAAACTGGATTAATATGCTTCATT
TGTCGTGAAGGTTACGCATCACAGCCTAATCAAGTCATGGGAATATATACTTTCACTAAG
CGTTGTCCATTAGAAGATTTCGAGCAGAAATCAAGGAAAACTATGGGATATACAACTGTT
AGTCATTTTAATGTTGTTCACACTAATTGTCATATGAGCGCAATACGAATGTCAAGAGGA
CGTGATGAATGGGAAAGTGCAAGTCTTCAAAATACAAATACAAAGTGCAACGGTTTATTG
CCATTATGGGGTCCAGATGTTAGTGAAACTGCATTCAGTGCTTGTATGGCTCGTCAGCAT
AGCTATTTACAAGACAGCACTCAACGAATTGACATTACTTTTGCAAGTGGAATTCATGAT
TTGAAATTATTGTTATTGAGATTTGCTCACGAAAAAACTTTTCACGATGATTGTAGTGGT
GGTGGTCCACAATCAAATATGCACTTGGTTCCATATTTAATGTTTTTTTCACTTTACATC
TCATTATCAACTCGATCATATACGCGTGAAGAGAAAGCATTGACAACTTTCTTGAATCAA
CCAGTAGGAGAGAAATGGCTAGAATCGTCTTATGAAGTTGATGGATCAGTATATCAAACA
GTTTTGAGCATTGTTTTACATACACCTGAAATGTGGTCAAAAAATCGAATCAAATATCTT
AAAAGATTAATTGTCACCTATCATGTGCGACATTTATATCCATCATCAACCTGCAAAGCA
CTTAACGGAGTTGGCGATAAAGATATAAAGGACTATAGTGTTTACAAGGGTGGTCTTATG
ATTTTTGCTCTAGTAGAACTCATTTACAAATATTTTTTCGCAAAAGTTGTTAATCCAAAA
GACGAAGATTGGTCTGTGTCACTTTTCAATTATATTCGAAAGAATGACGAAGCAATGCTA
AAATCAGCTGTTACTGTTTTGGAAAATTTCCGCGACGAATATTTGCCATGTACATCGTTT
GGTGAATTTTGTGATGTTGCCGGTCTCTTGGATGAAATTGATGATCCAGATAAATTCTTA
TTGGACCTCTTGCAGTCGTTGCCCTCTGGAAATTAA

>g3458.t1 Gene=g3458 Length=5231
MSNFSDVINIIKEKSENGLLLRPETFNIIKILVKRENEVFNHNEEYNVFFDHVIALVAES
IAQIPVSVSQTKLLTLLEAVNLIIRYIVKRFENSNAPIILVKALKSLCDVDASMENGPTY
SSIKYMKFPESSKSTNGSGSDKESPKSETVKRSRSELSIVIMNQLTQPLTSGTIPLTNFS
ESQFDFTELFRKEVMDLLKSLNASDVFLNWCINCIPIISSTYSLKFNGDMILQQKSLHLP
QTQNDAQNVRQCLKQIDIDTNNILNILQLPIMEPLNKTRILQLSQLSILSLYCCVVTTIA
HSITMISTNSAGTQTTALKSASTSTQQQTQSSSSNTKESQSIAVEIDPFEEVSRKVVNQS
LEIFKNVNEIFKKHAQTNIYQNHVCLGAWILFTGIQGAMSVSGSKSQTQLQSGSSDEFVK
SKSPSRHVDSNIPPAPQPRVNLFKVQQGFSVLNVLIAKCGIQLMEELLNEMKVDSGNGLD
LKLNEDILIAQQQHLSPEYINFNIMKTYTSIDRIICAFNGTNIQQLLTFLATISYRKACS
LKLTEFGGEQLSYSDSTTYFNDTLSCSEDDSETEEDGEQDETEEDSSEGYLGSWLKEALS
PEAKDATKDDNDKQKQEENQKLGLQYAKDEPHEYLELASQIFQFLDAKLGDAENKILIKY
MRHGLSEQQMILLANILKDLDSDAQINNINSTVTVSSNNASSNDATNAAIQWRSSMMKFS
SSIGKYMHNLISNSLLNESLQSLLLQNLGVSPWANDSNTWPLEVYSRILAVVVQILILKP
NQEKEAACLSVWHRLVNTLVEGVCGSNVSQFDEYDDLNIEHAQILLFLFHSLNLMQKKSI
LLLVAGGVIRCAEVCRTPEKPLRDAQLILLSRLLLFLEYLMKHLYSPPEILLEQVSWNLF
SIFTLDSEEKSAGLMNYKMKMSMFCRKDLEEKYRKLSTVHDGITIKPKLYSLTAIDASKQ
NEFKLDGLAWNFILCTPDKVKYPMLIDSLVSILNITDMSTYKVPHHSQFATYYCFSLAWK
LLLGLPPSTQHVENLISLEDKQVNLHTLLWSTRCLKPVTSGVHAHNLIVDCLIRQGMYTQ
AAETMWSNLTEKLNDYNHILTASKIGLDSFLQTFQTQTPRLSKIIMLDSLLSHLYYYQTL
AANGEAKNKNDEQAVTSRHSSNIDDNLSKNLLDKLVQTLDLMMNVFNKTMTQSLSGQVPQ
KVLDSIIAISGTNNNISGDLSENLLRSIQSSDKEILMEWNSKMNKVNLGDDTNIQQPEQI
TLNIVEAHLAEIYRHQNFSMVLSLKSAIRSLINWINYMLPHFDNAKVDLKLQDLLVQMLF
DIRTDFIYDSISKCLQTLIGSDSNSENYQLPIYIHLIQQSYNIVVEYCDASLIGSIKSIN
IDESALHDIIRFWESLTEKSNGLKALREFFYERKQGNLVNILLSFSGTNLTQQYSQNVLK
FFEKLFQVSENMDSSYSIDEVCASLSDLGTIDSVKLKNWLSHILLGPKGISLEGAISSAT
SSNFPTPTNLGTQSSAPSLTIDRKSGPEAEAMEVDEECRLPSITNWTTIAQSSSNDQAVG
GALENVENNGKLLQTLTKYLVAENRVSTNVSQALFQAMLQLSNSLLTNTASESVLSDFTS
LFNVIVTLADADQGRGHSALFASTIEWFEICKNRILEKYNKNQQSALSTGNAVKVQLDNI
TALLKYFSDLLTGINGQQRPLSSIWEDDIALDIEEIIASERDGENDEGEATAEDSDEDTN
NKLCTYTITQKDFMNQHWYWCYTCKMVDDKGCCSICARVCHKNHDVCYAKFGNFYCDCGA
KEDGSCRAMSLLDNNGTSSIPSSTTMDHGEILVSSLKRQTSNTIQPCSDILNLICNKPSL
AKIIDASKDQLSSVDMWRNVLKCLLNFCNSLIPIVKENCAKYSTVGCHLRAKNALERLHQ
PEKAFSYSDQVMIATLGSQEGAFENVRMNYSGDQGQTIRQLLSSNLIRRVALCALSSPHG
KRQHLAVSHEKGKVTILQLSALLKQADAAKKKLTLTRLSSVPITCSVLSLSANPANEDFL
AVCGLRECHVLTLLQNGTVSEHIVLTLQLDNGNYLRRAIWLPGSQTKLALVTAEYVKIYD
LAEDSISPLYNFVIPSGDIRDVCFVLQEGNYYLLIMSSLGYIYTQHLSDESLAVHGPFYL
TNTLELDHSYIRDVNGQILGGGVSIYYSHTLQLLFFSYAAGKSFMAPLVDVNEGVKCVVN
LLHSSKVFSKGGSSNGSQSPLCQWIEIQGHPGLICAMQQTTNNPVIFMLKPDGYQVQEIK
AQNSKAKIMDIVAIRHQVSGIEKTTLILLCEDGSLRIYAANPETTNYWLSSEIQPIGNYY
NSGILVKERGGTKKKTKKTSANKQIQKSQATGPNPIFPVDFFEHCTALHDVEFGGNDLLE
IYNLQQLQHRLNSTGLYVASTRFNGFTLEVTNKDTNMVMTGIRFLIGTQDSSRAPSAVTI
LGRRIPTICTTARWFAIPLTREESLQSDKKLSIHFSPSSDPEFVTKLDSIKIYGKTKESF
GWPDEIFDENVGLIGQSSSQIQESSETDNQSCNITSLDKMITGMLDVVDNGFYFLGGSTV
DSILKQTAIDVTTSLLLLPTPGVVQQLSRSVLATLHSNKSQYHQYKDREILGDVSKELQI
MLSATNYRNIDPEGFYRLVLLVRNIALQRPQQLTKICQENQYPIVTSLMALTKELHQVST
NYEDVACSIVHFGLTHKEAIQSLIEILYAFIYTDSTMIDSMIKFIVELLLDKDPQVSHSA
KYAIIRILRPKFKRQRKVLIESTTPPSCQTPTPQSAPTLIQEDISMQNNIQDVDLIEPLG
LVAAGGAENRDLVEPSLEALLGMAAGNVPAAIGGVGRDIHGEALMEFALELYLQEYEGDI
QAFQGLANRLRGNQAFQAVAQVGGAQNQPRVNNSAGGSDDEESNAATDGSRDVNQMQQML
VASPSNEQFIDNTADGGNGSDGSGAESIGGRSSNYDEPLVTSTNSPPKMTSSKLESVKDE
EDLCEQENSAKLHQIRIAILEKMIENFNAIDNVNGRQVIPFMQVILMLTTDLYLDGSQEN
ERNIMTKLLSTCVEKLEMNQSSPPAAQLSTRSPKSEVQLIMLRFVGILMGKMKTLSSKSN
SLASASTATIDNIQFVATSTAKHLMQSGAISYCLAILESFLPYWRQNSTNDPNSPQQNTA
NGAHIVTSNGMTTNTLLKPTCYGPVPDMQPFFARQYIKGLSDIFELYPQVLTEMAVRLPY
QILKLTNSNANQHQHSYDSALTFTLCEYMLHMQSPSIRRQVRKLLLYMCGNKERYRKLRD
LHSLSEHMKAIRISLNSTGLTYQVLVSLMDHLKACYEIASARTGNWQRFCLLNTDVLSSL
LSLSCQHLDHEISTIILQLLQAAVVNVQISNNSSGQIKSKDRKDRDKSEELDSLGNETKF
DPANCNLLVQQIFNQVSIPNLSLFIKTFLLETNSINIRWLAHGLIYAFYENCNEANKTKL
LEVLFALWPLIPVYGKRTPQFIDLIGFFTLNTKSAVHLLPEKISKAVKLLREQNEFVAKH
PSASLYTSLSQVLDLDGFYLESEPCLICNSVDQSFNIIKLTSIKMDSKFTTNSNIIKLVN
AHIISKIILRIGDLKRTKMVRTINVYYNSRNVQAVVELKNRPSMWHKAKSITLQSGQTDV
KIELSLPIVASNLMFEYEDFYETVTSLPESLQCPRCSANVPANPGVCNNCGEHVFQCHKC
RAIHYDEKDPFICQSCGFCKYAKFDYSIYGRPTSAVDAVESDEDRAKTVQTINNLLEKAD
KSYRELMNVRQSLELLIPKIADGSIANDLVAGNISSTMHINKIVQQMEKKYCNEGRTHFE
DLTKIVQKIQACRRELVAYDKLQQMDSTPVTSVIIPTESTDIVHSRCYGCALASIEQILT
LLRGMSSQMQSRVLLCNEGLIEELATNNMRHGTDQKIQEEVRNLLCLLTRDLPEPTERLC
NLLKSRVIAALDGSVPLSNLDNAVRNEMALLEAMALQEDSCWQMKLKPIIELFKRASNDS
RGPATPIVQPCLRVIQYICNPPMPTSKKNKGKTTLELCTVKPSEGISVNTTKWLEGDKQH
TFEAWKKRQSSNASISQLPASDSKPKNETFMAVMDEKRQQTRRIYLMEKYGHRWHLKTIK
KHLHLPLKLIPSYLPSILFHPTSRLVRVNACSLVTSWMTTHERKLHLLNLLTCFLKYVGE
AGEASSEFIDLFKQIAQEPPYRQYLALNNVITKIADLLNQEFEKIYKLEESTTLSTDLGQ
GYALKQYVDLISMFLDNPQIRKSYKGIVLQSIIQSYLNLRKLVVQRTMYIDEAQKSLMNL
LEELTSGTEEETASFITICIDIVRKTPTNDMKTPLFMFERLCSTIHSEDSDNDEFFLNLE
KDQLQEEFIQGRMLGNPYPSSEPGLGPLMRDVKNKICFDCEIMAMLEDDNGMELLVHNKI
ISLDLPVKEVYKRVWLAGGGERDTMRIVYRIRGLSGDATEEFIENLKPVAAAEEDNEQTY
RMVNVIADCNGLKVILDRMSYLQNVSRAKPFLQTLLKLLLMCVKVKKCREELCQPELGAI
SNLLKVLHLCLQHQVQENDPQMSTITEQLLEIMETILAKAASDSLDSFLQFSLTFGGPEY
IEALLSCTNHANVRNNPHVLRCLIRVVAALVYGNDIKMALLCDHFKNSFDFEKFDQERTA
EEEFQLELFCILCSAIERNTIGGILKDYIMGLGIVDKAVSYIVKYAPTNRLILLPFASSL
DSDELKLFISKPSLKFILQFLAGLATKHEKTQLVVAKDLIPVIHQLEQVSSDEHVGSLAE
NLLEALSSEPATAKVVQEYRDSTRAEKKRLAMATREKQLNALGMKTNEKGQVTAKEQVLQ
ELDSAMADLVKQETGLICFICREGYASQPNQVMGIYTFTKRCPLEDFEQKSRKTMGYTTV
SHFNVVHTNCHMSAIRMSRGRDEWESASLQNTNTKCNGLLPLWGPDVSETAFSACMARQH
SYLQDSTQRIDITFASGIHDLKLLLLRFAHEKTFHDDCSGGGPQSNMHLVPYLMFFSLYI
SLSTRSYTREEKALTTFLNQPVGEKWLESSYEVDGSVYQTVLSIVLHTPEMWSKNRIKYL
KRLIVTYHVRHLYPSSTCKALNGVGDKDIKDYSVYKGGLMIFALVELIYKYFFAKVVNPK
DEDWSVSLFNYIRKNDEAMLKSAVTVLENFRDEYLPCTSFGEFCDVAGLLDEIDDPDKFL
LDLLQSLPSGN

Protein features from InterProScan

Transcript Database ID Name Start End E.value
15 g3458.t1 Coils Coil Coil 2873 2893 -
14 g3458.t1 Coils Coil Coil 3776 3796 -
13 g3458.t1 Coils Coil Coil 4310 4330 -
10 g3458.t1 MobiDBLite mobidb-lite consensus disorder prediction 131 152 -
7 g3458.t1 MobiDBLite mobidb-lite consensus disorder prediction 319 341 -
11 g3458.t1 MobiDBLite mobidb-lite consensus disorder prediction 565 591 -
9 g3458.t1 MobiDBLite mobidb-lite consensus disorder prediction 567 587 -
8 g3458.t1 MobiDBLite mobidb-lite consensus disorder prediction 2901 2929 -
6 g3458.t1 MobiDBLite mobidb-lite consensus disorder prediction 2957 3001 -
12 g3458.t1 MobiDBLite mobidb-lite consensus disorder prediction 2957 2992 -
2 g3458.t1 PANTHER PTHR21725:SF1 E3 UBIQUITIN-PROTEIN LIGASE UBR4 278 5228 0.0
3 g3458.t1 PANTHER PTHR21725 E3 UBIQUITIN-PROTEIN LIGASE UBR4 278 5228 0.0
1 g3458.t1 Pfam PF13764 E3 ubiquitin-protein ligase UBR4 4393 5208 0.0
16 g3458.t1 ProSiteProfiles PS51157 Zinc finger UBR-type profile. 1742 1811 8.365
5 g3458.t1 SMART SM00396 push_1 1742 1810 1.9E-21
4 g3458.t1 SUPERFAMILY SSF50978 WD40 repeat-like 1973 2318 5.49E-8

Transmembrane regions from TMHMM

Disordered region

IUPRED3 score over 0.5 is predictive of a disordered region.

GO terms from InterProScan

GOID TERM ONTOLOGY
GO:0005515 protein binding MF
GO:0008270 zinc ion binding MF

KEGG

Orthology

Pathway

  • This transcript belongs to the following pathways

Expression

Transcript expression in Pv11 cells

TPM values are indicated as average +/- STDEV.

Differential expression

Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.

Raw TPM values