General information for g6176.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as E3 ubiquitin-protein ligase HUWE1.
Parent gene
- The parent gene g6176 is located on chr_2: 14915334..14916225 (+ strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_2 | g6176 | g6176.t1 | TSS | g6176.t1 | 14900122 | 14900122 |
| chr_2 | g6176 | g6176.t1 | isoform | g6176.t1 | 14900946 | 14915334 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon1 | 14900946 | 14901206 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS1 | 14900946 | 14901206 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon2 | 14901269 | 14901996 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS2 | 14901269 | 14901996 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon3 | 14902065 | 14903841 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS3 | 14902065 | 14903841 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon4 | 14903904 | 14905230 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS4 | 14903904 | 14905230 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon5 | 14905295 | 14908897 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS5 | 14905295 | 14908897 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon6 | 14908967 | 14910992 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS6 | 14908967 | 14910992 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon7 | 14911050 | 14911281 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS7 | 14911050 | 14911281 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon8 | 14911341 | 14911503 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS8 | 14911341 | 14911503 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon9 | 14911571 | 14914231 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS9 | 14911571 | 14914231 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon10 | 14914330 | 14914651 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS10 | 14914330 | 14914651 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon11 | 14914729 | 14914894 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS11 | 14914729 | 14914894 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon12 | 14914974 | 14915164 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS12 | 14914974 | 14915164 |
| chr_2 | g6176 | g6176.t1 | exon | g6176.t1.exon13 | 14915232 | 14915334 |
| chr_2 | g6176 | g6176.t1 | cds | g6176.t1.CDS13 | 14915232 | 14915334 |
| chr_2 | g6176 | g6176.t1 | TTS | g6176.t1 | 14915879 | 14915879 |
Sequences
>g6176.t1 Gene=g6176 Length=13560
ATGAAAGTGGATACGAGTCGCCTGAAAAAAGGCACCTCAGAAGTACCGCCAGAATGTCAA
AATCTCATCGATAAACTTAAGCTATGTGATCGCAATGAGTTGATTGAAGAATTGGCAAAG
ATCGAGACCTGGACGTTTGGAAAATGTGAATTATTTCATTGGATTGAAATTTTAGATATT
TTTGATGAAATATTAGAAGAAGCTACACATTATGAAGAACATCCAATTTATATTACTTGT
GATACGCCACAGTTTGAGAAGGGACGAAAGCTTCTTCTTCTCGTTCTTAACTTCACAACA
CTTCTCATCGAACATAGTTTCTCGAGACATTTGTACAATTCAGTTGAACACTTGACGCAA
CTTTTGCTCTCAACCGATCTAGAGATAATTCTTGGGGTTCTCAATTTACTGTATATGTTC
TCAAAACGAAGTAATTTCATATCGCGACTAAGTAGTCATAAAAAAAATACATTATTAAAT
CGTTTGAGACACATTGCTGAACCTTATGGTGGAAAGGAATGCGGATTTGGTTTAGCTGAT
TGCTGCCGTCCTGATCAGAAGATGCCAAAGGCGATCTATCACTTTTATTACGAGTACTAT
ACAAAAACGGGAGCCTTACAAGTCATTGATCATCAGAATATCTCCAAACACGATCCGAAA
AGTATTACAGTGAAATTATGGAAAGACTTGGATCAACATCTTGACGATGATCAAAAGTAT
CATCTTTTTGCTCGCGCTCGACTTGCAACAGGATTTTGGAATTATGATAACCGCATATTA
TTTGTACAAGCACGCCTTCAAGCTCTTTCAATTCTCGTTTATTCTGATGCATTAATGGGT
TATACACCAACATTAATTTATCCAGGATTTCTTGAAGAACTCGTAGAATTATTAGAATTA
CAACAGCCAAATTTAGTTGAAATACGTGCGGCAGCTTTACGGACATTAACTGCAATTATT
CATTTAGAAAGAAATTCACAATATCAACGTAAATCTGAATCTCGTCTCAATACGATTATT
GAAGTGACAGGTGCATCTTCTTATCATGGTTTTTTACCTACACTTGTTCGAAATTGTATT
GTCAATCTAACTGGCTCAAGTAAATCTACACCAACAACACCGTCTTACAGCAGCGATCAA
CAGCAGTCAAATGATGAAAACAACCTGTTTCCATTGCAACTCGCAACTGCTTTGTTTAGC
TTTCTATATCATTTAGCTAGCTATGAGCCTGGTGCTGAATCACTTGTTTCGTGTGGTATG
ATGGAGAGTCTTTTGCGAGTCATTAACTGGTCAGGAAGTGAACTGGAACACATTACATTT
GTAACACGCGCTGTGAGAGTAATAGACTTGATTACCAATTTAGATATGCAATCATTTCAA
ACCAACTATGGACTCAATACTTTCATAAAACGACTTAATATGGAAGTAAACTTGTGTCGA
AAGGAGCAATCATACGAGATAAAGCCAAACCTTGATAATCCTGCTGAGCACGATAAAAAT
ATTACACACATTGATGAAGCAATGGATACTGGAAGTCAATATGGTGATGACGATGTTTGT
ATGACAGCTTCTACGAGCAATATAATGTCAACATCAATGCAATCTTCATCGAACAATGAT
GTAGCTGGAGGAAGTTCAACATCTCCAAAGCTTAATGATTCAATTGTATCAAATCGAACA
TGTCTACCACAAAGAGCAGCACTTTTAAAATCAATGCTTAATTTTCTAAAGAAAGCTATC
CAAGACATTGCATTTTCTGATTCTATTCGTCATATAATGGAAGGAACATTACCAGAATCG
TTAAAACACATCATTAGCAATTCAGAATATTATGGTCCATCTTTGTTTTTACTAGCCACC
GATGTTGTGACAGTTTATGTTTTTCAAGAACCATCACTTTTATCTTCACTTCAAGATAAT
GGTCTAACAGATGTTGTTTTACAAGCGCTCTTGAAAAAAGATGTTCCAGCAACACGCGAA
GTTCTTGGTTCTTTGCCGAATGTTTTTAGTGCATTATGTCTTAATACTCGAGGAATGGAA
AGTTTTATGAAGTACAATCCATTTGATAAGCTCTTTCATGTTTTTATTTCACCCGTCTAT
CTTTGTGCAATGAGACGAAGACGCAGTTCCGATCCAATAGGTGACACAGCATCAAATATT
GGTAATGCTATGGACGAATTAATGAGAAATCAACCTAGCTTAAAAACACCGGCAATAAAA
GCAATTATAAAATTACTCGAAGAAATTGTTCAACTTGGAACTGATCCAAAATATGTTTGT
TGGCGTGCGCAAAATAAAAACGATGTTTCACCTCAAATGCCAAACTCGAGGCAAAACAAT
AACAACCACAATAATGGCGGTAGTTCAGACGAAGATGATGACGATGAAGAGGAAGTATCA
ACTTCATCACATAATCAAACACAGGGTCAACCTGCTTCTTCTGGTACCGCAGAAAGTGGT
AGCAATTCAAGTCAAGATCAAACGCAAGAACAACAACCTGGCACATCTCATTCATTCTCA
CAAGCTTCATCGCCTACTGAACGCATTCCAATTGCACTCATTGACTATACATTAAATACA
ATGAAATTCCTTGAGGCTATTTTAAGTAATAATTCGACTGATGATCATTGCCGTGAATTT
GTAAATCTTGGTGGACTGAAGCCTCTTCTTTCAATTCTATCGCTACCAAATTTGCCTGTG
ACGAGTTTTAATTCGCCAATAACAGCTACAGCACAAGCAGTTGCATCTGTTTGTAAATCA
ATCTTGAATTTGACACATGAATCACAAGTTCTTCAAGTTGCTTTGGAACAATTGTCAGTA
GTAGTAGAGAATCTTCAATCTCTGATGAACACTCAAAAACACACCAGTAGCAGTGTCTTA
TTGAAAGAATTAGCAAATTGCCAGGATATCAATCATGCCTTTACAAATGCGCATTATACA
CCTTTGCTACATGCAATGAGTGCTGTTCATGGATATGTTTTGATGTTGGTTCATGTTTGT
CGTAGTGGTCAAAGCGACATAAGAACTTTATCTTTGATCAAATGGGGACAAGATAATGAA
ACTGGAATTCGACTTTTAAAAAAATTAGTGATGCTCTATACTGGTCTTGTATGGGAATCA
ACATTGCTGCTGGCACTCTGTACTGATGATATTGTTCCACCTGGTTCTGAATTCAGCAAA
GACGAAATGGATAAACTAGGAGCTAGTGATGTTAAAAATGTTATCGAAGTAAATTGGGAC
GAAATTGTTACAAATTTATCTGTCATGGAAAATTTGACTCCTATTCCTGGAAGTGGACCT
TCAAATATGGATGTTGATGGTACCAATACAACTGGTGCATTAAGAAAAGTTAAAGCACAG
GAACCAATGAGGATCATAACCCAAGGTCAATTGAAGTACATTAAATCATTGCTTGGTGCA
TCATCTCGTTTGGGACGAGCTCTAGCAGAACTTTTTGGTTTACTTGTTCGTTTATGTGTT
GGATCACCATTACGTCAACGTCGAGGACAAAATTTCTTACCAACACCATCAATAACTTCG
CCTACATCACGTGATATTGCTAGAATTTTGAGCTTCATTTTAGTCGATGGATTGTCGTTT
CAAAAATTACCATCATCACCTGTTCCGAAACTTAAACTTACATTCTTGATATGCTCAATT
GGTTTTACAAGTCCAATGTTATTTGATGAGAAACGATTTGCTTATCACTTGATGCTTCAA
AAGTTTATTGAAGAGGGAGGTCTTGAAGCATTCTTTGAAATGTTCCGATGGACTCTTACT
GCCGGTTATACAATTCCAATTCATAGAGCAATTGAACATCCAAATTTACCTGATGGTACT
GGTGAAGCTTTAGACGCTTGGCTTATGTTGCTTGAGAAAATGACAAATTTAAAATATATT
ATTGAGTCACCTCATCAAATCACATCAAAGAACCGAAATGGAAAATCAGATTTTGACACA
AAACATTATCTTACATACATTCATCGTAATGCATTCTTTGCTATTCAACATATTTGGGGA
TTTAAGCCACTCAAATCTTACGGACCACGAATGACAGAATCGATGCTTTCAATTCTTAAG
CATATCATAAAAGGTGAAAAAGTTTTGCAATCAAAATATTACAAAAATGGACAAGGTGTT
TTAATTTTATTGGATAACAAACCAAAATCAATTTTACCTGGTGCCGATTCTGGAGCTGCT
GGTCCATCATCAACTTCTTCAGTTGCAGCTGCAAGTGGTAGTGATGTAAATCAAGATCAT
TTACGACAATTGGTTGATATGGGTTTTTCGCGTGAAAACAGTATCTACGCATTAAGACGT
TATTTGAGCTTAGAAGGAGCAACAGAATATCTACTTACGAATCCAAGAAATCGTGCATCA
ATTTTATTTGATGCTATTAGTGATGATGAACGATCTGGTGGAGCGAATAATGCTCAAAAT
AATCCACCAGTTGTTAATATGGACATTGATGTCGGCGAAGAAGATGAACATGTTATTCGC
GCTATTTTGAATAGTTTAGGTGGTGAACTGAGATCATCAACTCCAATTGCACCGACCCCA
AATTTAGAATTCACATCAAGCAGCTTAGAAATCACTCCAGGAGCTAGCAAATCTACATCA
GAATCTGCAAAAGCTGGAGAAGCTGCAAAGAGCAAACAAAAGGAAATAATGAAAAAGTAC
CTACTTGAACAACCATTACCGAAGAAAACTCTTGATGAATTCACTGCAAATTTATTAAGT
ACGTGCTTAAATATTTTGGATCAATTACCTGAAACGGTTTACAAAATTTGTGATCTTCTC
ATTACTGTGACTAAACGCAATGGACCGATTTGGCGTGATGAAATGCTCGATAAATTGTGT
AAAGAAATTTATGAATGCATTCAATATCTTATTAAAATTTTTGTTCACGATGACGAACGA
GGAACTAAAAATTACAAAGAAAAGAGTGAAAAGCTCGTTTCTGGGGAAATGGCAAATAAA
ACTGCAGTAAGAATTCATCTTTTTACATTATTCTTCCAAGGACAATATCAAGATATGAAA
GTACCTTGTGCTAATGCACTGAAAACTTACAGCATCATCCCGCGTCTCATCAAAGTTCTC
ACAGAATATCAAATGATTGTCACAATGATGAGTAAAACGTTGCCAGCAACTCCTAAATGG
CTTGCTCCATTAGCATTACTATTGGATTTATATGATAAAGTTGCATTATCAACTCAGCAA
AAACAAAAGATGCATAAAATTTGCACTCGTCAATGGCAATGGTATGATATTACATCACTC
AAATGGCTCAACTATTCACCACAACAAAATAAGCAAATTAATGACGCTTACAATGCAGGT
GAGAGTGAATTTCAACTAATGGTGAGTCGTCATCGTTATACAATCAATTTCAAATGCATG
TCGCAAATAAATGATGAAAGCTCGAATCATCGTCCAATTATAATGGCCTTAAGATCAATT
GAAGAAATGAATAATAAACCTGAAGTGTTTGATGAAAAAGCTGAAGAGAAAGCGGAAGAA
CAAACAGAAAAGTCAGAAACTGAACAGTCAACTTCTCAAGCACAGCAGCAACAAGAAACT
ACTGCACAAGTTGAATCAACAACTACATCAACAGAAACACCACCTATAAGCATAACACCT
ACTGTTTCATACACATCAGTTCCAACAGAAACTGAAACTGTTAATTTGATGGATATAGAT
ACCCCTGCAAAAGACTATATTAAGATGTTAGACGAAATTGAGTTAGAACCTTTGAGCAGT
TATGCACCTGAAGAAATTGTTTCATCTTGCGTTCAATTGATGGCTCATCAACAACTTGAT
CGAGACACATTACATGCTATAATGAGAGTTTTAGTTCGTCTTACAAAAGATTATAATATG
GCTGAAGTTTTTGCACGTTTTGGAGGAGTCGATGTTTTATTAAATATGAAACAAAATTCT
GGTTTTATTGGATTCACAACACTTGCAACTCTTCTCATTCGTCATGTGATTGAAGAGCCT
AAGACATTGTCACTTGCAATACAAAATGTTTTGGTAAATCGAACGCTCGTCACTATTCCA
CCTGGACATCGTGAACTTCTTTTCCTCATTCGACAATTGAATTCAGCTGTATATCGCGAT
CCAGAACTTTTTAAAGAAGCAGCACTTAAAATTCTTCGCGTTGATTTTGATTCAATGAAA
CGTTCACAGCTTCCAGATGAAAAACGTTTTATTATGAAATCAATACCTTTGCCAACAAAC
ATTAAATATAATATGGAGCATACCACAGCAATGTCAGCCGTTTCAAAGTTATTGAAAGCA
TTGATTGAACCGGATGAGTTAAACGCCAATAGTAACATGGTATGGATGCAATCAGATAAA
AGCAAAGAAAATAACAGTAACAATTCAAAGAAAGAAAAGTTTACGATAACTAACGAGCAA
CAGCAATCATCGCAGCAAGGAACGTCATCGAACGAAGATCAAAAAGATAAGCAGGCCGGT
GGTATGAATGACAAACCATTACTGAATAAATCTGCAATTCTCAAGATTCTTGCTGAATCT
GTAAAGAGTTATCAAACTGTTGCACTTCATATCACAGAACATGTTTATCGAGCTGGCAGC
TCTTCATTGATTACTGAAGATACTACTGCACTTTCCTATATTTTGGATAAAATGTTCCAT
CTTAGTGAAGTAAATACTGATCGTGAATGTCCCGCTACTGCTCAGAGTTTAATTTCTGCA
ATTGCATCATCAGATGTGACACAAGCGCAAGAGACTGTTGTTCATGAAGTTAAGTTGGCA
CTACAACGAGCTTTAAGCGAACCCGAATCGAATGAAAAACATCTTCATATTGAAGGGCTT
GCTCAATTGATTCCTGCAATGATTGATAATAGCAGCAGTGGAAATTCCAATGATTCAAGT
CAAGTTTTCAAAACAACAAATCAAAGTCAAGTTCGACACAATATTTTCTATATAATGCTA
GAGAAAGGAATAATTACTGATATTGCAAGAGCTGTACAATATCTAGAACTTGGTGGTCCA
AATACTACTGCAACTTTGAATCATTTATTAAAACCTATGGAAATGCTTGTAAGGTTAACA
AATGAGCCGATGCCATCGATTCCATCAATGAAGTATAAGAAAATGCCACCAACACGTCGC
TCACAAACTGCACAGAGTGAGACAGAAGGAGGCACAAACACTACAGCAAATCAACAAGAA
TCAAATCAGGCTACTGAGCAACAAAATAATCAAACAAATTCGGAGGCATTAAGTAATAAT
GTGAATGCTACGATGACAACAGCATCTGGCGTGACATCAAATAATCAACTAAACAATCAA
ACTGCGACAAATAGCGATTCTACAAATGCACAAGATGAGCAAATGCTTGCAGATGACAGT
GAACAAAATACAGATCGTGATATGTCAAGTGCTGCTATCGACTCATTAGTTGGAGAAAAT
GAACTTGGTGAAGTGCATTTAAATGAAATTCTTGATACTTTGATAAGTGAAGAATTGCGT
GGCATTAATGAGTATGCAGATGATGCCAATCAAGATGAAGACGACAATAATGAAGAGGAA
GGTAATGAAGGCGAACGACGTCGTATGTTACGTGATAATGTCGAGTTAATGAATGTTCAC
GAAGAGTCTAGCAGTGATTCAGGTGATTCAGAGTCAAATGCGTCAGATAATGAAGAAAGA
GAAATCGATGAAGTTGAAGAAATCGAAAATGACGATGATGAAGAAGAAGAGGCAGAAGAG
CGTTCAGAGCTTGATGAAGATGAAGAAACTCAACCCTTTGAAATGTACGACCATCATTCA
ATGTATGGACGCCGTTTATCGCCATCTATTCCTGAAATTGAACGTGACCATGAAGATATT
CTTATGATACAGTATTCGAATAATGCTCAAAACAACGCAAATGCAAATAACAATGCAGAA
AATCGCGAAAATCGAACTGTACGTGATCGCGATTCTCAAATCGGTGGCAATATTAGCATA
TCAGTAACAAATAATGAAAACAATGCAAATAACGCTAATGAGCAACCACAAAATTTCCTC
TTTAATTCAAATTTCCCAATTTTGTACAATGAAAATAGTGAGCAAGGTGGTAATGATAAT
TCGAATTCTGCGCAAGGTGGTCAAGCTGGAAATCAAAATGATACTTCAAGTGCACCAATC
AATACAAATGCACCACCGCCCAATAATCATCCTCTATTATCAGGACGACCTGATGGTACT
TCAACAGATCGTGTCGATGATCGTTTGCATGTGAATGATGGCATACCAACAGCTCGCCGT
TCAAATCGCACTAGAAGATATCAATTTATCAATATCAGCTCACGAAACCAACCAGTTATA
TTGCAACGAATGCTCGAATTAAGACAAAGTCGTCAAGCTGGTCAAAATGGTGGTGGAACA
GATCCTTTACTATTCCGTGATGGAACTCGAGTTGTTGTGATGGATAATGGTTTTAGCATT
TTCTCAAATAGTGATGAATTAGATTTTGAAATGGTTGATCAATCGGGTTATTGGTTTGGA
AGAACTCTCGCCAATCATTTGAATAATCATCCATCTGCATTGAGTTGGTGGCAAGAAGAA
AACAAAATTTCAGGTCCCGATTCAAATTCCGATCTATGTATGATAATTTGTGATGAAATT
TTACCTGAAATTGATGCCGCACGTACTGCTGAATTAAGTAAAATTCGAGGAAAACGCAAA
AAGAAGTTGTTTGAAGAGGAAGAGGCTAAACAACGTAATCAAGAAGGAAAGAAAACTAAT
GAAGAAGAAACGGCAGAAATCCATGTGCAACCTGAAGTTGCCTTATCAAGTGTATTGACA
AATATTGTTCCGGTGCCTGTCGAACCAATTAGATTAGCTGAGCCTATTCCTAATGAATAT
CCCGAAAGTGAACAATCACAGCAGCAACAACAACAGTCTGCTTCATCTTCATCTCAAACA
GCACCAACAACAGCTTCAAATAATCTCGACATTTCGTTTATGGAAGTAAATGATGGCGAA
CAAACTAATCGTTCACAGTCCGATTTCACACCGATTACAGTTTCAACACAAATTGTACAA
CCACCGCAACATATAACAACCGATAATCAATTGAATTTGGACTTGGATGTTGAAATGACA
TCAGATAATGATGAATCGTCTGCATCTGCTAACAATTCACGTTCATTCTCGCCTAATTAC
TCACCAAACAGTAATCAAATTGAAACTGGTGAAATGAATATGCTAAATCGTGAAACAACT
CCATCAGCTACACTTGAGCAAAATCAAGTAAATAATATGAACATTCAAGACAATAGAGAT
AACGGAAATGATCATCCAATGGCTGATGCTGATGTTGACAGTGAAAATGGAGAAACAGTA
AACGAAATGAATTCGATGACAATTGAGGCTAGTCAAGTTCCTCTACCAACCGATGATTCT
GATGTCGATGACACTGAAACATCTGATGATTCAGATGATGATGATGAAGATGCTGAAGCA
ATTAATAAATCATCACAAGATGCACCAAATGATCAAGGAACAAGCACAGCTGGTAATGAA
ACATCAGAAAATGTACAAGCTAGTGGTGAAGAAAATGCTGTCGGTGGAAGCAATCAACCT
GAAATGGATCCTTCAATTAGAGCTATTTTGGGTGATTTGGTTGTACCTGAAGGTGTTGAT
CCAACATTTTTGGCTGCTTTACCTCCAGAAATGAGAGATGAAGTTATTCAAGAACATTTA
CGACAACAAAGAATTCGAAATCGAACTCAAGCAGCAGTTACTGTGCAAGAAGCACAAGCA
GTAGCAGATGTAAATCCAGAATTTTTAGCTGCATTACCATTGAATATTCAAGAAGAAGTT
CTTGCTCAACAAAGAATGGAGCAGCAACGTCAAGCAGCTGCAGCTGCAAATCCTAATGAT
CCAGTAAATGCTGCAGAATTCTTCCAAAATTTACAACCATCATTACGTCAAGCTATTTTA
ACTGACATGGAAGATTCACAAATTTCTGCATTGCCACCAGATTTAGCAGCTGAAGCACAA
ACATTGAGGCGCGACTGGGAAACAAGAAACCGTCAAATGCAAGAACGCATTTTAACGACT
AATTTCTCAAACGTCCTTCGTAGAACTACAAGCCATCATCCTCGAGTGTTTGTGCCTAGA
CAACATCTTCTAGGGTTTGGATCAGGTGGTGGGCATCAAGTTTCATTAGCACGTACTCTG
CCTTTATCACAGTCATCAATCACAGCAAATATGGAAAGACAAGGTGCTCCTTTACTCGAT
CAAGAATCACTTGCATCAATTCTTGTGATTTTATTCATTGATGATCCAAATATTGGGACT
TTAAGACTTTATCGTGTTATCCGTAATTTGTGCTTCCATGCTCCGACACGTAAATGGATT
TTCAAATCACTGCTTAGCATAATTATGCGATGTAATGAAGAGTCAATGGAACATTATTTA
GAACTGCCAGCATCAACAGGAGCTACGTCAAAGAATAAAACAAATATCCGTAGTGATGAT
GAAAAAGTCAAGTGGCTTAAATTGAGATTAGATTCAGCTCTTGGAGGTCGTGCAAATGTG
TTTCTTAAAAAATATGGAAAGGGTGGAAGCACTCCACTTACAATTCATCCAAAAGCTTCG
CCAACTGTCTGCCGACATACACTCGAATTGCTCATCTTTTTGGCCAAATCTTTTCCTGTT
CATTTCTTACCTTCTAAAAAGAATGGACAGTTATCAACTGCCGCAGGCTCATTGAATACA
AATGAAACAAGCGATGAACAGATGCCTTCAACATCAGCACAAGCAATGCAGCGTGATAGA
TCAACTGATTTCTGGGACATTCTTTTACGATTGGATAATGAAATTGATGAGCGAACGAAG
AAAGGTGCAAATTTGAAAGCTGCATGCAAACAAATTAAAGAATTCCATGAGCAAGATATC
AAGACTTTTATTGATTCACCTTTTGGACAGTTGATAATGATGCTCTCATATGATATTATT
AGAAAGAATACTATGTTGACTGATAAACTTCTCCGTCTACTCTCATTGATCTCCATCGTA
TTAACTGATGATAAATATCGTAATAATAACTTGTCAAAACCACCACAGCAGCAGCAAATC
ATGCAATCATCAAGTTCAAATGCTTCACAGCCATCGACAAGTACTATTGTTGCAACATCG
AGCGATAACAAAGTAACAAATGATCTTTCGAAAAACAACGATAGTGAAGCACGCGAACGG
CTACCTGAATCCGAAAGACATTTGGCGTTAACAGTCGATGTTTTGACGTCTAAAGCCTGC
TCAGAGGATGGCCTTGAAGATGCAACAGCACTATTAATCAATTTGAGTCAATGTTCAAGC
TTGACAAAGTACATGATAATAAAGCTATTGGTAAAAGGTGTTATTGAACTTTCTCATATG
GTTCAGAAGCATATTAATAATCTGATGGTTGAATTGCGTGAACTGAACGAGGCGATAAAA
AATGAGAAATTGAAACCCGAAACAAATAACGATGATTCTGATGAACTTTCAAAGCCTTCA
TCATCAAAAGGAATTCTCAAGGATCGTTTCACAAAAGATGCTGTCATTATTACAGCTCCA
TCAAAAGTTAAGACATCGAATGATCTTCAATTACCATCTATGGCACCACTCTTGTCAAAG
ACATCAAATCAAAGCTTCTTCCTAAGGATACTTAAAGTGATTACACAAATTCGTGATACA
GTTCGACAGGATACAAAAATTCAAGATAGTGATATTGAGCAACAGCTCACTAAGTTAGAA
ACTGTCCCATTGAGTGAACTTCTTGATCTTGATTCATTATGGAATACACTCAGTGAATGC
TTAAAAGAATTGGAAGAGACGCAAGATCATCATGCTGTACTTGTTTTACAACCAGCAGTC
GAAGCATTCTTTATTGTTCATTCAGCGCCTCAGGTCAAACATTCATCTAACAATACACGA
ACTATTTCACCACGATCACTTGTAAATGCAGTGAATCAAAATGCAGAAGCGCAACAAGAC
AATAATGCTACAATTGAAAATGCAAATAATAATCAAGCAAATGAAGCACAGGAGAATAAT
GAGCAGCAACAGCCACCACCACCACCACAAAATCAACAACAAGTACATCTTAATATTCCA
GTTGATGAGAATGCAGCAGCAGCTGCAAATCAAGGAGATGAAGCTGGAACTTCACAACAT
GAACGTTTGTCACCAATGGATACAACACAATCTAGTGAAGGTTCAACAAGTGGACAAACA
ACTTCAAATTTGCAACATCAACACAGTCAACAAAACTTGTCTGCCGATCAAAAGAAGTTT
TTGCAATTTGCTGAAACTCACCGTGTCGTACTAAATCAAATTTTACGTCAATCATCTGTT
CATTTGGCCGATGGTCCATTTGCAGTTCTTGTTGATCACACGCGAGTTCTAGATTTCGAT
GTAAAACGACGCTATTTCCGTATTGAATTGGAGCGTCTTGATGATGGCGTTAGAAGAGAA
GAGCTTGCAGTTCATGTACATCGTGTCAACGTTTTTGAAGATTCATTCCGTGAGTTATAT
CGAAGAAATCCAGAAGAATGGAAGAATCGCTTCTATATTGTGTTCGAAGATGAAGAAGGA
CAAGATGCTGGAGGTTTATTACGTGAATGGTACATGATTATATCTCGTGAGATTTTCAAT
CCCATGTATGCACTTTTCACTGTTTCACCTGGTGATCGTGTTACATACATGATCAATCCT
TCATCTCATTGCAATCCAAATCATTTGTGCTACTTTAAGTTTGTTGGTCGTGTGATAGCT
AAAGCAATTTATGACAACAAATTGCTCGAATGTTACTTCACGAGAGCATTTTACAAGCAC
ATACTTGGTATACAAGTGAAATATACTGATATGGAAAGTGAAGATTATGCTTTTTACCAA
GGTCTCGTTTATCTAATGGAAAATCATGTCGACTCTCTCGGCTATGAATTAACATTTAGC
TTGGAAGTACAGGAATTTGGTGTGACAGAAGTTCGTGAATTAAAGAAAGATGGCTGCAAT
ATTCCAGTTACAGAAGAAAATAAGCTTGAATACATTCAACTTGTGTGTCAAATGAAAATG
AGTGGATCTATCAAACAACAACTTAATGCATTCTTAGAAGGATTTTATGACATCATCCCT
AAACGATTAATTTCAATATTTAATGAACAAGAATTGGAATTGTTGATTTCTGGCCTTCCA
AATATTGACATTGAAGATTTACGCGCAAACACTGAATATCACAAGTATTTAGCCACATCA
ATACAGATACAATGGTTTTGGCGTGCTTTACGTAGTTTCGATCAAGCAGAACGGGCTAAG
TTCCTTCAATTTGTCACGGGAACCTCAAAAGTTCCACTTCAAGGATTCGGTGCTCTCGAA
GGAATGAACGGTATTCAGAAGTTCCAAATTCATCGTGATGATCGCTCGACTGATCGTTTG
CCATCAGCGCATACATGCTTTAATCAGTTAGATTTGCCTGTTTATAAATCATATGACAAA
TTAAGAACCAATTTGCTTAAAGCGATTCACGAGTGCTCAGAAGGATTTGGATTTGCTTGA
>g6176.t1 Gene=g6176 Length=4519
MKVDTSRLKKGTSEVPPECQNLIDKLKLCDRNELIEELAKIETWTFGKCELFHWIEILDI
FDEILEEATHYEEHPIYITCDTPQFEKGRKLLLLVLNFTTLLIEHSFSRHLYNSVEHLTQ
LLLSTDLEIILGVLNLLYMFSKRSNFISRLSSHKKNTLLNRLRHIAEPYGGKECGFGLAD
CCRPDQKMPKAIYHFYYEYYTKTGALQVIDHQNISKHDPKSITVKLWKDLDQHLDDDQKY
HLFARARLATGFWNYDNRILFVQARLQALSILVYSDALMGYTPTLIYPGFLEELVELLEL
QQPNLVEIRAAALRTLTAIIHLERNSQYQRKSESRLNTIIEVTGASSYHGFLPTLVRNCI
VNLTGSSKSTPTTPSYSSDQQQSNDENNLFPLQLATALFSFLYHLASYEPGAESLVSCGM
MESLLRVINWSGSELEHITFVTRAVRVIDLITNLDMQSFQTNYGLNTFIKRLNMEVNLCR
KEQSYEIKPNLDNPAEHDKNITHIDEAMDTGSQYGDDDVCMTASTSNIMSTSMQSSSNND
VAGGSSTSPKLNDSIVSNRTCLPQRAALLKSMLNFLKKAIQDIAFSDSIRHIMEGTLPES
LKHIISNSEYYGPSLFLLATDVVTVYVFQEPSLLSSLQDNGLTDVVLQALLKKDVPATRE
VLGSLPNVFSALCLNTRGMESFMKYNPFDKLFHVFISPVYLCAMRRRRSSDPIGDTASNI
GNAMDELMRNQPSLKTPAIKAIIKLLEEIVQLGTDPKYVCWRAQNKNDVSPQMPNSRQNN
NNHNNGGSSDEDDDDEEEVSTSSHNQTQGQPASSGTAESGSNSSQDQTQEQQPGTSHSFS
QASSPTERIPIALIDYTLNTMKFLEAILSNNSTDDHCREFVNLGGLKPLLSILSLPNLPV
TSFNSPITATAQAVASVCKSILNLTHESQVLQVALEQLSVVVENLQSLMNTQKHTSSSVL
LKELANCQDINHAFTNAHYTPLLHAMSAVHGYVLMLVHVCRSGQSDIRTLSLIKWGQDNE
TGIRLLKKLVMLYTGLVWESTLLLALCTDDIVPPGSEFSKDEMDKLGASDVKNVIEVNWD
EIVTNLSVMENLTPIPGSGPSNMDVDGTNTTGALRKVKAQEPMRIITQGQLKYIKSLLGA
SSRLGRALAELFGLLVRLCVGSPLRQRRGQNFLPTPSITSPTSRDIARILSFILVDGLSF
QKLPSSPVPKLKLTFLICSIGFTSPMLFDEKRFAYHLMLQKFIEEGGLEAFFEMFRWTLT
AGYTIPIHRAIEHPNLPDGTGEALDAWLMLLEKMTNLKYIIESPHQITSKNRNGKSDFDT
KHYLTYIHRNAFFAIQHIWGFKPLKSYGPRMTESMLSILKHIIKGEKVLQSKYYKNGQGV
LILLDNKPKSILPGADSGAAGPSSTSSVAAASGSDVNQDHLRQLVDMGFSRENSIYALRR
YLSLEGATEYLLTNPRNRASILFDAISDDERSGGANNAQNNPPVVNMDIDVGEEDEHVIR
AILNSLGGELRSSTPIAPTPNLEFTSSSLEITPGASKSTSESAKAGEAAKSKQKEIMKKY
LLEQPLPKKTLDEFTANLLSTCLNILDQLPETVYKICDLLITVTKRNGPIWRDEMLDKLC
KEIYECIQYLIKIFVHDDERGTKNYKEKSEKLVSGEMANKTAVRIHLFTLFFQGQYQDMK
VPCANALKTYSIIPRLIKVLTEYQMIVTMMSKTLPATPKWLAPLALLLDLYDKVALSTQQ
KQKMHKICTRQWQWYDITSLKWLNYSPQQNKQINDAYNAGESEFQLMVSRHRYTINFKCM
SQINDESSNHRPIIMALRSIEEMNNKPEVFDEKAEEKAEEQTEKSETEQSTSQAQQQQET
TAQVESTTTSTETPPISITPTVSYTSVPTETETVNLMDIDTPAKDYIKMLDEIELEPLSS
YAPEEIVSSCVQLMAHQQLDRDTLHAIMRVLVRLTKDYNMAEVFARFGGVDVLLNMKQNS
GFIGFTTLATLLIRHVIEEPKTLSLAIQNVLVNRTLVTIPPGHRELLFLIRQLNSAVYRD
PELFKEAALKILRVDFDSMKRSQLPDEKRFIMKSIPLPTNIKYNMEHTTAMSAVSKLLKA
LIEPDELNANSNMVWMQSDKSKENNSNNSKKEKFTITNEQQQSSQQGTSSNEDQKDKQAG
GMNDKPLLNKSAILKILAESVKSYQTVALHITEHVYRAGSSSLITEDTTALSYILDKMFH
LSEVNTDRECPATAQSLISAIASSDVTQAQETVVHEVKLALQRALSEPESNEKHLHIEGL
AQLIPAMIDNSSSGNSNDSSQVFKTTNQSQVRHNIFYIMLEKGIITDIARAVQYLELGGP
NTTATLNHLLKPMEMLVRLTNEPMPSIPSMKYKKMPPTRRSQTAQSETEGGTNTTANQQE
SNQATEQQNNQTNSEALSNNVNATMTTASGVTSNNQLNNQTATNSDSTNAQDEQMLADDS
EQNTDRDMSSAAIDSLVGENELGEVHLNEILDTLISEELRGINEYADDANQDEDDNNEEE
GNEGERRRMLRDNVELMNVHEESSSDSGDSESNASDNEEREIDEVEEIENDDDEEEEAEE
RSELDEDEETQPFEMYDHHSMYGRRLSPSIPEIERDHEDILMIQYSNNAQNNANANNNAE
NRENRTVRDRDSQIGGNISISVTNNENNANNANEQPQNFLFNSNFPILYNENSEQGGNDN
SNSAQGGQAGNQNDTSSAPINTNAPPPNNHPLLSGRPDGTSTDRVDDRLHVNDGIPTARR
SNRTRRYQFINISSRNQPVILQRMLELRQSRQAGQNGGGTDPLLFRDGTRVVVMDNGFSI
FSNSDELDFEMVDQSGYWFGRTLANHLNNHPSALSWWQEENKISGPDSNSDLCMIICDEI
LPEIDAARTAELSKIRGKRKKKLFEEEEAKQRNQEGKKTNEEETAEIHVQPEVALSSVLT
NIVPVPVEPIRLAEPIPNEYPESEQSQQQQQQSASSSSQTAPTTASNNLDISFMEVNDGE
QTNRSQSDFTPITVSTQIVQPPQHITTDNQLNLDLDVEMTSDNDESSASANNSRSFSPNY
SPNSNQIETGEMNMLNRETTPSATLEQNQVNNMNIQDNRDNGNDHPMADADVDSENGETV
NEMNSMTIEASQVPLPTDDSDVDDTETSDDSDDDDEDAEAINKSSQDAPNDQGTSTAGNE
TSENVQASGEENAVGGSNQPEMDPSIRAILGDLVVPEGVDPTFLAALPPEMRDEVIQEHL
RQQRIRNRTQAAVTVQEAQAVADVNPEFLAALPLNIQEEVLAQQRMEQQRQAAAAANPND
PVNAAEFFQNLQPSLRQAILTDMEDSQISALPPDLAAEAQTLRRDWETRNRQMQERILTT
NFSNVLRRTTSHHPRVFVPRQHLLGFGSGGGHQVSLARTLPLSQSSITANMERQGAPLLD
QESLASILVILFIDDPNIGTLRLYRVIRNLCFHAPTRKWIFKSLLSIIMRCNEESMEHYL
ELPASTGATSKNKTNIRSDDEKVKWLKLRLDSALGGRANVFLKKYGKGGSTPLTIHPKAS
PTVCRHTLELLIFLAKSFPVHFLPSKKNGQLSTAAGSLNTNETSDEQMPSTSAQAMQRDR
STDFWDILLRLDNEIDERTKKGANLKAACKQIKEFHEQDIKTFIDSPFGQLIMMLSYDII
RKNTMLTDKLLRLLSLISIVLTDDKYRNNNLSKPPQQQQIMQSSSSNASQPSTSTIVATS
SDNKVTNDLSKNNDSEARERLPESERHLALTVDVLTSKACSEDGLEDATALLINLSQCSS
LTKYMIIKLLVKGVIELSHMVQKHINNLMVELRELNEAIKNEKLKPETNNDDSDELSKPS
SSKGILKDRFTKDAVIITAPSKVKTSNDLQLPSMAPLLSKTSNQSFFLRILKVITQIRDT
VRQDTKIQDSDIEQQLTKLETVPLSELLDLDSLWNTLSECLKELEETQDHHAVLVLQPAV
EAFFIVHSAPQVKHSSNNTRTISPRSLVNAVNQNAEAQQDNNATIENANNNQANEAQENN
EQQQPPPPPQNQQQVHLNIPVDENAAAAANQGDEAGTSQHERLSPMDTTQSSEGSTSGQT
TSNLQHQHSQQNLSADQKKFLQFAETHRVVLNQILRQSSVHLADGPFAVLVDHTRVLDFD
VKRRYFRIELERLDDGVRREELAVHVHRVNVFEDSFRELYRRNPEEWKNRFYIVFEDEEG
QDAGGLLREWYMIISREIFNPMYALFTVSPGDRVTYMINPSSHCNPNHLCYFKFVGRVIA
KAIYDNKLLECYFTRAFYKHILGIQVKYTDMESEDYAFYQGLVYLMENHVDSLGYELTFS
LEVQEFGVTEVRELKKDGCNIPVTEENKLEYIQLVCQMKMSGSIKQQLNAFLEGFYDIIP
KRLISIFNEQELELLISGLPNIDIEDLRANTEYHKYLATSIQIQWFWRALRSFDQAERAK
FLQFVTGTSKVPLQGFGALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPVYKSYDK
LRTNLLKAIHECSEGFGFA
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 37 | g6176.t1 | CDD | cd14288 | UBA_HUWE1 | 1416 | 1455 | 1.24492E-13 |
| 38 | g6176.t1 | CDD | cd00078 | HECTc | 4162 | 4517 | 7.86346E-148 |
| 28 | g6176.t1 | Coils | Coil | Coil | 1837 | 1857 | - |
| 29 | g6176.t1 | Coils | Coil | Coil | 2502 | 2522 | - |
| 26 | g6176.t1 | Coils | Coil | Coil | 2558 | 2590 | - |
| 23 | g6176.t1 | Coils | Coil | Coil | 2906 | 2926 | - |
| 27 | g6176.t1 | Coils | Coil | Coil | 3336 | 3356 | - |
| 25 | g6176.t1 | Coils | Coil | Coil | 3805 | 3825 | - |
| 24 | g6176.t1 | Coils | Coil | Coil | 3987 | 4022 | - |
| 18 | g6176.t1 | Gene3D | G3DSA:1.10.8.10 | DNA helicase RuvA subunit | 1411 | 1455 | 8.8E-11 |
| 22 | g6176.t1 | Gene3D | G3DSA:3.30.720.50 | - | 1749 | 1825 | 7.8E-11 |
| 19 | g6176.t1 | Gene3D | G3DSA:3.90.1750.10 | Hect | 4160 | 4398 | 3.2E-92 |
| 20 | g6176.t1 | Gene3D | G3DSA:3.30.2160.10 | Hect | 4284 | 4363 | 3.2E-92 |
| 21 | g6176.t1 | Gene3D | G3DSA:3.30.2410.10 | Hect | 4400 | 4519 | 2.2E-50 |
| 45 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 786 | - |
| 62 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 844 | - |
| 66 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 802 | 844 | - |
| 44 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1530 | 1546 | - |
| 54 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1530 | 1549 | - |
| 46 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1825 | 1846 | - |
| 58 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1825 | 1885 | - |
| 63 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 1847 | 1885 | - |
| 52 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2118 | 2164 | - |
| 56 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2130 | 2156 | - |
| 51 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2366 | 2414 | - |
| 68 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2376 | 2414 | - |
| 41 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2430 | 2457 | - |
| 50 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2430 | 2468 | - |
| 60 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2505 | 2604 | - |
| 70 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2521 | 2547 | - |
| 49 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2556 | 2591 | - |
| 59 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2628 | 2655 | - |
| 71 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2695 | 2715 | - |
| 47 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2742 | 2762 | - |
| 55 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2897 | 2924 | - |
| 69 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 2960 | 2988 | - |
| 67 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3041 | 3062 | - |
| 61 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3128 | 3201 | - |
| 53 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3139 | 3160 | - |
| 43 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3163 | 3199 | - |
| 40 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3692 | 3743 | - |
| 64 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3692 | 3728 | - |
| 42 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 3729 | 3743 | - |
| 57 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 4014 | 4033 | - |
| 48 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 4048 | 4093 | - |
| 65 | g6176.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 4051 | 4093 | - |
| 11 | g6176.t1 | PANTHER | PTHR11254:SF67 | E3 UBIQUITIN-PROTEIN LIGASE HUWE1 | 139 | 707 | 1.7E-286 |
| 14 | g6176.t1 | PANTHER | PTHR11254 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE | 139 | 707 | 1.7E-286 |
| 10 | g6176.t1 | PANTHER | PTHR11254:SF67 | E3 UBIQUITIN-PROTEIN LIGASE HUWE1 | 714 | 1861 | 1.7E-286 |
| 13 | g6176.t1 | PANTHER | PTHR11254 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE | 714 | 1861 | 1.7E-286 |
| 9 | g6176.t1 | PANTHER | PTHR11254:SF67 | E3 UBIQUITIN-PROTEIN LIGASE HUWE1 | 3613 | 4518 | 1.7E-286 |
| 12 | g6176.t1 | PANTHER | PTHR11254 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE | 3613 | 4518 | 1.7E-286 |
| 2 | g6176.t1 | Pfam | PF06012 | Domain of Unknown Function (DUF908) | 89 | 219 | 4.3E-18 |
| 1 | g6176.t1 | Pfam | PF06012 | Domain of Unknown Function (DUF908) | 209 | 360 | 2.4E-12 |
| 7 | g6176.t1 | Pfam | PF06025 | Domain of Unknown Function (DUF913) | 442 | 900 | 3.3E-104 |
| 3 | g6176.t1 | Pfam | PF02825 | WWE domain | 1751 | 1813 | 2.8E-9 |
| 5 | g6176.t1 | Pfam | PF14377 | Ubiquitin binding region | 3214 | 3244 | 3.5E-10 |
| 4 | g6176.t1 | Pfam | PF14377 | Ubiquitin binding region | 3259 | 3290 | 6.6E-8 |
| 6 | g6176.t1 | Pfam | PF14377 | Ubiquitin binding region | 3295 | 3328 | 0.0013 |
| 8 | g6176.t1 | Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 4214 | 4518 | 1.1E-91 |
| 31 | g6176.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1 | 90 | - |
| 34 | g6176.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 91 | 112 | - |
| 32 | g6176.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 113 | 117 | - |
| 36 | g6176.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 118 | 140 | - |
| 30 | g6176.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 141 | 609 | - |
| 35 | g6176.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 610 | 628 | - |
| 33 | g6176.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 629 | 4519 | - |
| 72 | g6176.t1 | ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 1415 | 1454 | 10.956 |
| 73 | g6176.t1 | ProSiteProfiles | PS50918 | WWE domain profile. | 1737 | 1815 | 15.501 |
| 74 | g6176.t1 | ProSiteProfiles | PS50237 | HECT domain profile. | 4183 | 4519 | 106.124 |
| 39 | g6176.t1 | SMART | SM00119 | hect_3 | 4181 | 4519 | 9.2E-176 |
| 16 | g6176.t1 | SUPERFAMILY | SSF46934 | UBA-like | 1410 | 1455 | 1.06E-7 |
| 17 | g6176.t1 | SUPERFAMILY | SSF117839 | WWE domain | 1750 | 1815 | 4.32E-13 |
| 15 | g6176.t1 | SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 4152 | 4512 | 5.36E-126 |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0005515 | protein binding | MF |
| GO:0004842 | ubiquitin-protein transferase activity | MF |
KEGG
Orthology
- This transcript has been annotated with K10592 (E3 ubiquitin-protein ligase HUWE1)
Pathway
- This transcript belongs to the following pathways
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
