General information for g6968.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Probable multidrug resistance-associated protein lethal(2)03659.
Parent gene
- The parent gene g6968 is located on chr_2: 20226907..20227366 (+ strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_2 | g6968 | g6968.t1 | TSS | g6968.t1 | 20222230 | 20222230 |
| chr_2 | g6968 | g6968.t1 | isoform | g6968.t1 | 20222748 | 20226935 |
| chr_2 | g6968 | g6968.t1 | exon | g6968.t1.exon1 | 20222748 | 20223443 |
| chr_2 | g6968 | g6968.t1 | cds | g6968.t1.CDS1 | 20222748 | 20223443 |
| chr_2 | g6968 | g6968.t1 | exon | g6968.t1.exon2 | 20223504 | 20223561 |
| chr_2 | g6968 | g6968.t1 | cds | g6968.t1.CDS2 | 20223504 | 20223561 |
| chr_2 | g6968 | g6968.t1 | exon | g6968.t1.exon3 | 20223629 | 20223708 |
| chr_2 | g6968 | g6968.t1 | cds | g6968.t1.CDS3 | 20223629 | 20223708 |
| chr_2 | g6968 | g6968.t1 | exon | g6968.t1.exon4 | 20223763 | 20225364 |
| chr_2 | g6968 | g6968.t1 | cds | g6968.t1.CDS4 | 20223763 | 20225364 |
| chr_2 | g6968 | g6968.t1 | exon | g6968.t1.exon5 | 20225424 | 20225589 |
| chr_2 | g6968 | g6968.t1 | cds | g6968.t1.CDS5 | 20225424 | 20225589 |
| chr_2 | g6968 | g6968.t1 | exon | g6968.t1.exon6 | 20225654 | 20226846 |
| chr_2 | g6968 | g6968.t1 | cds | g6968.t1.CDS6 | 20225654 | 20226846 |
| chr_2 | g6968 | g6968.t1 | exon | g6968.t1.exon7 | 20226909 | 20226935 |
| chr_2 | g6968 | g6968.t1 | cds | g6968.t1.CDS7 | 20226909 | 20226935 |
| chr_2 | g6968 | g6968.t1 | TTS | g6968.t1 | 20226990 | 20226990 |
Sequences
>g6968.t1 Gene=g6968 Length=3822
ATGGAATCACTGAATTCTAAGAAACAATTACCACCGAGCCCAAGAGAAAAAGCAAATTTA
ATTTCATACATAACATTTGCATGGGCTATTCCAATATTCTTAAAAGGCAGAAATCAAACA
ATTGGCGATGATGACTTATTTCAACCGTTGAATGAGCAAAAAGCAAGTGGCTTAGCAAAT
AAAATAAAAGATTCGTGGAATAAAGAAGAAGAAAAATGTAGGAAAGATAATAAGAAACCA
TGGCTTGTTAGCGTATTGAGAAGAGTTTTTGGTTATGAAGTTCTTTTTCAAGGACTTTTC
CTTCTTTTCATTGAATGTGGATTAAAAATTCTACCTCCAATTTTTCTTAATCAAATAATT
AAATATCATGAAAATAAAGATAAAGAAAGTGAAGCAGTTATGTATTGGAGTACTTTTGGC
ATCACTTTGTGTATTTTTTTCAATGTCATAATTATGCATGCCTTCAACTTGAGTAACTTA
AATTTGGGACTTAAAATGAGAATTGCTGTTAGTACCTTGATTTATGATAAATGTTTACAA
TTATCAAAAAGTTCACTTGCAAATGTAAGCTTAGGAAAAATTGTAAATCTTTTGTCAAGT
GATGTTGGAAGATTCGATTCAACAGCTTTTGGATTTCATTATTTATGGGTTGGTCCAATT
CAAACAATTTTTGTTACATATTTAATTTATAATGAGATTGGTTGGTCAGCATTTGGTGGA
GTTGCATTAATTTTATTAATGATTCCATTGCAATTATTTCTTGGAAAAACAACAGCAATG
TTGAGAATGAAAACTGCATTAAGAACTGATAAAAGAATCAAATTGATGAATGAAATAATA
CAAGGAATTCAAACAATTAAAATGTATGCATGGGAAAAGCCAATGGCAGCATTGATATCA
CAAACCCGAGGAAAAGAAATTCGAATGATACGATTTGTTTCATGGATCAAGGGTATAACG
CTATCACTCATGCTATTTTCATCACGCGTTTCAATTTTTACAAGTTTGATTCTGTTTGCA
ATTTTGGGAAATTTACTCACCGCACAAAAAGCATTCGTGGTTACTGCATATTACAATGTC
TTGAGGCAAACTATGGTGATAATGTATCCTTTAGCAATCAATAATGTTGCGGAATGTCGT
GTTGCTATTCAGAGAATTCAGCAGCTGCTGTTTATTACTGATACAAACAATAATGAGAAA
CAAAATAAATGCCCAAAAATATCGAGTGCATCGACCTATATAAAAATGCGAAAAGTATTT
GCAAAATGGAACAGTCAATCACCTGAAATGACTTTAACTGATATCAATATAGATATTTCA
TCACCATCATTAAACATTGTTGTCGGTAGAGTAGGTTCTGGTAAATCTAATATGATTCAA
GCTATTTTAAATGAACTTCCAATTGAGACAGGAGAAATTGATGTTAATGGAAAAATTTCA
TATGCATCACAAGTGCCATGGTTATTTTCTGGTTCTGTTAAACAAAATATTGTTTTTGGA
CTTCCATTTGACAAAAATCGTTACAATTCAGTTATTAAAGCTTGCTCGCTGTCGAGAGAT
TTTGAATTGTGGACTGATGGTGATGAAACAATTGTTGGAGAAAGAGGGATGAGTTTAAGT
GGCGGACAAAAGGCAAGAATTAGTTTGGCAAGAGCAGTTTATAGAGAAGCTGACATTTAC
TTACTAGATGATCAACTAAGCGCAGTCGATAGTCATGTGCAGAAACATTTGTTTGAAAAT
TGCATCAAAGATTTCTTGAAAGATAAAATTGTCATTCTTGTCACACATCAACTTCAATAT
TTACCTTTTGCTGATCAAATATTTCTCTTCGAAAATGGAAAAATTTTAGCTAAAGGAAAT
TTTGAAACTTTAAAAAATTCGGGTCTTGATTTTACAATAGAAGAGAACAATGACACTGAA
ATTCTTAAAAGACAAATAAGTAAAGAAGTTGAAAAGCCATTGCAAAAAGAAGAGAATAAA
AAAGTTGATAGATCAGAGAAGCGAGCGGAAGGCAGCATTGGATGGAAAATTTATAATGAA
TACTTCCAAGCAACAGGTGGCTATTTAGTCATGTCATTTATCATGGTATTCTTTGTAATT
GCACAATTAATGGCTTCTGCTAGTGATTATTTTGTTTCATACTGGGTATCAAAAGAATCA
CAACGAGATAATGAAAATCAATTAGTCGTCTACGATCGTAATGTCGACATTTACATTTTC
AGTGCATTGACATTTGCAACAGTGTTGCTAACGTTCGGAAGAAGTTTTATGTTTTTCAAT
GTCGCTATGCAGGCAAGTCGTCGATTACATGATGCAATGTTTAATGGAATAAGTCGAGCA
AAAATGTTCTTTTTCAACACAAATCCATCGGGTAGAATTCTTAATAGATTTAGTAAAGAT
TTGAATCAAATTGATGAAATGCTGCCATTTACTTTGATTGATGTTTTTCAAATTTTATTC
TCATTTCTTGGAACAATTGGTGTGTTGGCGGTTGTCAATCAATTCTACCTCATTCCGACA
TTTATTTTATTTTTCATTTTTTATCAAATTCGTCAAGTCTACATAAAAATATCATTGGAT
GTCAAAAGACTAAGCTCAACAACATCATCGCCTGTATTTTCATATCTCAGTGAAACTCTT
ACTGGACTTTCAATTATTCGTGCCTATAAACTTGAAGATCAATTAAAAAGTGAATTTTTT
AATCATTTAGACCTCAATACTTCATCACATTACATTTGGTTAGCAATGACTAGAACTTTT
GCATTTTGGCTTGACATGTGCTGCTTCATTTATATTGCGATTGTAATCATAAGCTTTTTC
TTTACCAATAGTACGAGTGGAAATGTTGGTTTAGCTATTACACAAGCAATGTCACTCACA
AACATGGTACAACTTGGTATGCGACAATCAGCAGTTTTGGAAAATCTCATGACAGCTGTT
GAACGAGTTGTTGAATATCAAACAGTCGACCCAGAGCCTGCTTTCGAGTCAGAAAATGAT
AAGAAACCACCAAAAGAATGGCCTGAGAAAGGTCAAGTGAAATTTGAAAAGTTATCATTA
AGTTATTTCCCCGATATGAAAGAAAAAGTTCTCAAAGAGCTTGAATTTGAAATTAATCCA
CAGGAAAAGATTGGAATTTGTGGTAGAACTGGTGCTGGTAAAAGTTCAATAATCAATGCT
TTATTCAGATTGTCATATTTAGATGGTAAAATAGAAATTGATTTAAGAGACACTGCAAAA
ATGGGATTGCATGATTTGAGATCTAAAATTTCAATTATACCACAAGAACCAGTGCTCTTT
TCAAATTCGATGCGTTACAATCTTGATCCATTTAATGAATATTCAGATGAAAAACTATGG
AGTGCACTTGAAGAGGTTAATTTAAAAAAAATGATTAAAGAAACACCAGCTGGTTTAAAT
ATGGCCATAGCAGAGGGTGGTACAAATTTATCAGTTGGAGAGCGTCAACTTGTTTGCTTA
GCACGTGCCATTTTGCGAGAGAATAAAATTATTGTCATGGATGAAGCAACAGCAAATGTA
GATTTGGAAACTGATGAATTAATTCAGAAAACAATCAGACAAAAATTTAAAAATTGCACT
TTGATAATGATCGCACATCGTTTAAATTCTGTTATGGATAGCGATAGAATTTTAGTTATG
GATGCTGGAAAATGTGTGGAATTTGGATCACCTTATGAACTATTGAATAAAACAGAAGAA
CCGAAATATTTTTATGAAATGCTACAAAATACTGGAAAAGGAAATTTTGAAAGCTTAAAG
AAAATTGCTGAAGAGAATCACTTGATAAAGAAGATGAAATGA
>g6968.t1 Gene=g6968 Length=1273
MESLNSKKQLPPSPREKANLISYITFAWAIPIFLKGRNQTIGDDDLFQPLNEQKASGLAN
KIKDSWNKEEEKCRKDNKKPWLVSVLRRVFGYEVLFQGLFLLFIECGLKILPPIFLNQII
KYHENKDKESEAVMYWSTFGITLCIFFNVIIMHAFNLSNLNLGLKMRIAVSTLIYDKCLQ
LSKSSLANVSLGKIVNLLSSDVGRFDSTAFGFHYLWVGPIQTIFVTYLIYNEIGWSAFGG
VALILLMIPLQLFLGKTTAMLRMKTALRTDKRIKLMNEIIQGIQTIKMYAWEKPMAALIS
QTRGKEIRMIRFVSWIKGITLSLMLFSSRVSIFTSLILFAILGNLLTAQKAFVVTAYYNV
LRQTMVIMYPLAINNVAECRVAIQRIQQLLFITDTNNNEKQNKCPKISSASTYIKMRKVF
AKWNSQSPEMTLTDINIDISSPSLNIVVGRVGSGKSNMIQAILNELPIETGEIDVNGKIS
YASQVPWLFSGSVKQNIVFGLPFDKNRYNSVIKACSLSRDFELWTDGDETIVGERGMSLS
GGQKARISLARAVYREADIYLLDDQLSAVDSHVQKHLFENCIKDFLKDKIVILVTHQLQY
LPFADQIFLFENGKILAKGNFETLKNSGLDFTIEENNDTEILKRQISKEVEKPLQKEENK
KVDRSEKRAEGSIGWKIYNEYFQATGGYLVMSFIMVFFVIAQLMASASDYFVSYWVSKES
QRDNENQLVVYDRNVDIYIFSALTFATVLLTFGRSFMFFNVAMQASRRLHDAMFNGISRA
KMFFFNTNPSGRILNRFSKDLNQIDEMLPFTLIDVFQILFSFLGTIGVLAVVNQFYLIPT
FILFFIFYQIRQVYIKISLDVKRLSSTTSSPVFSYLSETLTGLSIIRAYKLEDQLKSEFF
NHLDLNTSSHYIWLAMTRTFAFWLDMCCFIYIAIVIISFFFTNSTSGNVGLAITQAMSLT
NMVQLGMRQSAVLENLMTAVERVVEYQTVDPEPAFESENDKKPPKEWPEKGQVKFEKLSL
SYFPDMKEKVLKELEFEINPQEKIGICGRTGAGKSSIINALFRLSYLDGKIEIDLRDTAK
MGLHDLRSKISIIPQEPVLFSNSMRYNLDPFNEYSDEKLWSALEEVNLKKMIKETPAGLN
MAIAEGGTNLSVGERQLVCLARAILRENKIIVMDEATANVDLETDELIQKTIRQKFKNCT
LIMIAHRLNSVMDSDRILVMDAGKCVEFGSPYELLNKTEEPKYFYEMLQNTGKGNFESLK
KIAEENHLIKKMK
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 45 | g6968.t1 | CDD | cd18579 | ABC_6TM_ABCC_D1 | 98 | 386 | 8.51221E-102 |
| 47 | g6968.t1 | CDD | cd03250 | ABCC_MRP_domain1 | 414 | 614 | 9.16187E-103 |
| 44 | g6968.t1 | CDD | cd18580 | ABC_6TM_ABCC_D2 | 693 | 986 | 3.08176E-101 |
| 46 | g6968.t1 | CDD | cd03244 | ABCC_MRP_domain2 | 1011 | 1231 | 5.22219E-123 |
| 17 | g6968.t1 | Gene3D | G3DSA:1.20.1560.10 | - | 88 | 391 | 5.7E-14 |
| 16 | g6968.t1 | Gene3D | G3DSA:3.40.50.300 | - | 409 | 633 | 5.0E-61 |
| 18 | g6968.t1 | Gene3D | G3DSA:1.20.1560.10 | - | 654 | 994 | 2.8E-36 |
| 15 | g6968.t1 | Gene3D | G3DSA:3.40.50.300 | - | 995 | 1250 | 3.8E-83 |
| 6 | g6968.t1 | PANTHER | PTHR24223:SF334 | FI20190P1 | 6 | 129 | 0.0 |
| 9 | g6968.t1 | PANTHER | PTHR24223 | ATP-BINDING CASSETTE SUB-FAMILY C | 6 | 129 | 0.0 |
| 7 | g6968.t1 | PANTHER | PTHR24223:SF334 | FI20190P1 | 132 | 638 | 0.0 |
| 10 | g6968.t1 | PANTHER | PTHR24223 | ATP-BINDING CASSETTE SUB-FAMILY C | 132 | 638 | 0.0 |
| 5 | g6968.t1 | PANTHER | PTHR24223:SF334 | FI20190P1 | 661 | 1258 | 0.0 |
| 8 | g6968.t1 | PANTHER | PTHR24223 | ATP-BINDING CASSETTE SUB-FAMILY C | 661 | 1258 | 0.0 |
| 2 | g6968.t1 | Pfam | PF00664 | ABC transporter transmembrane region | 98 | 365 | 6.7E-26 |
| 3 | g6968.t1 | Pfam | PF00005 | ABC transporter | 432 | 564 | 4.4E-15 |
| 1 | g6968.t1 | Pfam | PF00664 | ABC transporter transmembrane region | 692 | 958 | 1.5E-32 |
| 4 | g6968.t1 | Pfam | PF00005 | ABC transporter | 1031 | 1178 | 1.1E-27 |
| 29 | g6968.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 1 | 19 | - |
| 35 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 20 | 36 | - |
| 19 | g6968.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 37 | 93 | - |
| 42 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 94 | 115 | - |
| 30 | g6968.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 116 | 134 | - |
| 43 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 135 | 157 | - |
| 24 | g6968.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 158 | 208 | - |
| 32 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 209 | 229 | - |
| 31 | g6968.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 230 | 234 | - |
| 40 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 235 | 254 | - |
| 23 | g6968.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 255 | 308 | - |
| 38 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 309 | 326 | - |
| 28 | g6968.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 327 | 331 | - |
| 34 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 332 | 358 | - |
| 22 | g6968.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 359 | 685 | - |
| 39 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 686 | 705 | - |
| 26 | g6968.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 706 | 736 | - |
| 36 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 737 | 759 | - |
| 21 | g6968.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 760 | 806 | - |
| 33 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 807 | 829 | - |
| 27 | g6968.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 830 | 834 | - |
| 41 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 835 | 854 | - |
| 20 | g6968.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 855 | 919 | - |
| 37 | g6968.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 920 | 941 | - |
| 25 | g6968.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 942 | 1273 | - |
| 60 | g6968.t1 | ProSitePatterns | PS00211 | ABC transporters family signature. | 539 | 553 | - |
| 59 | g6968.t1 | ProSitePatterns | PS00211 | ABC transporters family signature. | 1150 | 1164 | - |
| 63 | g6968.t1 | ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 98 | 365 | 29.152 |
| 65 | g6968.t1 | ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 414 | 637 | 20.575 |
| 64 | g6968.t1 | ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 693 | 975 | 32.729 |
| 66 | g6968.t1 | ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1013 | 1247 | 16.774 |
| 61 | g6968.t1 | SMART | SM00382 | AAA_5 | 441 | 614 | 2.0E-5 |
| 62 | g6968.t1 | SMART | SM00382 | AAA_5 | 1040 | 1224 | 9.6E-12 |
| 12 | g6968.t1 | SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 76 | 386 | 2.62E-29 |
| 14 | g6968.t1 | SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 407 | 627 | 2.4E-50 |
| 11 | g6968.t1 | SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 690 | 992 | 1.44E-51 |
| 13 | g6968.t1 | SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1003 | 1245 | 2.71E-67 |
| 55 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 98 | 120 | - |
| 58 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 135 | 157 | - |
| 51 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 210 | 229 | - |
| 53 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 233 | 255 | - |
| 57 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 310 | 332 | - |
| 48 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 336 | 358 | - |
| 54 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 686 | 705 | - |
| 52 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 737 | 759 | - |
| 50 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 810 | 832 | - |
| 56 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 836 | 855 | - |
| 49 | g6968.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 920 | 942 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0055085 | transmembrane transport | BP |
| GO:0005524 | ATP binding | MF |
| GO:0042626 | ATPase-coupled transmembrane transporter activity | MF |
| GO:0016021 | integral component of membrane | CC |
| GO:0016887 | ATP hydrolysis activity | MF |
KEGG
Orthology
- This transcript has been annotated with K05673 (ATP-binding cassette, subfamily C (CFTR/MRP), member 4)
Pathway
- This transcript belongs to the following pathways
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
