General information for g7075.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Prolow-density lipoprotein receptor-related protein 1.
Parent gene
- The parent gene g7075 is located on chr_2: 21023442..21023943 (+ strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_2 | g7075 | g7075.t1 | TSS | g7075.t1 | 21007275 | 21007275 |
| chr_2 | g7075 | g7075.t1 | isoform | g7075.t1 | 21007524 | 21023943 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon1 | 21007524 | 21007659 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS1 | 21007524 | 21007659 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon2 | 21009005 | 21009694 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS2 | 21009005 | 21009694 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon3 | 21009754 | 21010020 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS3 | 21009754 | 21010020 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon4 | 21010148 | 21011084 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS4 | 21010148 | 21011084 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon5 | 21011432 | 21011685 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS5 | 21011432 | 21011685 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon6 | 21011765 | 21014669 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS6 | 21011765 | 21014669 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon7 | 21014734 | 21017702 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS7 | 21014734 | 21017702 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon8 | 21017798 | 21018115 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS8 | 21017798 | 21018115 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon9 | 21018183 | 21020220 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS9 | 21018183 | 21020220 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon10 | 21020287 | 21020521 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS10 | 21020287 | 21020521 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon11 | 21020582 | 21020841 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS11 | 21020582 | 21020841 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon12 | 21020900 | 21022796 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS12 | 21020900 | 21022796 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon13 | 21022855 | 21023390 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS13 | 21022855 | 21023390 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon14 | 21023442 | 21023769 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS14 | 21023442 | 21023769 |
| chr_2 | g7075 | g7075.t1 | exon | g7075.t1.exon15 | 21023830 | 21023943 |
| chr_2 | g7075 | g7075.t1 | cds | g7075.t1.CDS15 | 21023830 | 21023943 |
| chr_2 | g7075 | g7075.t1 | TTS | g7075.t1 | NA | NA |
Sequences
>g7075.t1 Gene=g7075 Length=13884
ATGAAATTTAAGAATATTTCGAGATTCAAGTTATTTATGACTTTAATAATAATTTTAAGT
TGTGTAATATCGTGTAGTTTTGCTAGTAAAAAATATAATATAAAAACTTTTGATAAACTA
ACAAGGAAAAGTGATGAATCATTGTCGTTGGATTCTCTTTCATCGGTATCTTCCGCAGCA
GCTACTTGCTCTGAGTTTCAATTTCAGTGTAAATCAAATGCTGTTTGTATACCATTGCAA
ATGAGATGCGACCTCTCAAATGATTGTGAAGATGGTAGTGATGAAAATTCAACTGAATGC
AAAAGAATCCCCGTAATTCAAAGTGAATGTGATAATGAAAATTTCTTTCATTGCAAGCTA
TCAAAGAAATGCATACCAAACGAATGGTTATGCGATGGAGAAAATGATTGCGGTTTGATA
GGTAAATTTGATTTACTCGATCCATCTGATGAAAATGTGAATTGCATAAAAAAGTGCCCT
GTGAATCAAGTGTCCTGTTCAAATGGAATTTGTTTACACATATCAAAGTTTTGCGATGGA
CATTCTGATTGTCAAGATGATGAACTTTTTTGTGGTAACAAAGCAAGCTGTAAGAATCTT
AAATGTGAGTATGCTTGCAAATCAACGCCACACGGGCCGAAATGCTTTTGTCCGCCGAAT
CAGGACATTGTAAACGAAACTAAATGTGTAGCACAAAAAGCTTGCAAAGAAGATGAGAAT
GATGGTGAAATATGCGACCAGTTGTGCTCAATTGTTAAAAATCGAAATAAATGTATTTGT
GCACCTGGTTATGAAAGAAGCAATCAAAAATGTTACGGAATCAATTCACCAATTACCGAA
CCAACACTGCTTTTTGTTCTTACGCCTCAAGAAATTTACAAAATTATTTTACCGTCCGAT
AGAAATAATTCAGAAAATACCTCCCCCGTTACGCTAACACAAGTGCTCAAATTAAAAAAT
CTCATAACCATGGAAGTGAATTTTTCAAACCATACCGTATGCGTTCTTGAAGATTATGAA
ATTTTTTGCTATAACGTATCAAATTTCATGGACAAGTGGAAAATGCCTAATCCGGATTTT
TTACCTCTTGAATCTGCTTCATCGTCCAATATACTTATATCTCAATTTGCACTCGATTGG
GTTTCACAAAATTGGTATTTCATGGATACAATAAATAACTTTATTTTCTTATGCTCACAT
GAAATGAAAAATTGTCGCATTATAATTCAAACATCACAAAATGATCCAATCAAAGTACGT
GCATTCGTCATTGATCCCACATCAGGATTTTTATTTCTAGCTAAATACGATACGAACAAT
CGCACGAGTGCTTCCATTGTGCGATATTTTCTTGACGGCACTAACGACATCAGCTTATTA
AAGGGAAAAATTTTTTATCCGCACGATTTAACGCTCGACGTTGCTGTCAAAAAGATTTAT
TTTCTCGATCACTATTTTGACTTTATACAACAATGTGACTACGATGGAAGCAATAGAAAA
TTTCTACAAAAATTACCATTTATGAAATTTCATCGCATAAATTTCTTCGAGAATATGTTT
TTTGGTGCAGTGAACGAAAATACATCAGTCGTTCAAATAAGTAAGTCTTCGGCGATATTT
ATAAAGACACTTGCAGAAAATTTGAAAGCAAATACCAAAGTATTGAAAATATTTCATCAG
CAAACTCAGCCAACAACAAAGACAAAAGTTTGTGTAAAAGACAATAATTGTGAGCACCTT
TGTGTACCGACAATCGAAGAAAATAATAATGGTGTGTCGAAGTTGCTAGAGAAATGCATT
TGCAAGGAGGGTTTTAAACTCAAAAATGGAAAATGCATTCTTAGGGATTCGAAAAGTTTT
ATTATGTTTGTTCAAGAGTATGCAAAATCGAGAACATTAAAAGCAATTGTTACCGATGGC
TCAAAAGAAGAAGTTTTCACTCCTATCACTGGTCTCAAGTCAAATATTGCATTTGATGTA
GACTTGAATAATAAGCTAATATACTTTACAACATATACAGAATCGAATATCATACGTAAT
AATACAATTGAATGTCGTTCTTTTAATGGCTCCTACAAGACTATAATTAAAGGCAATTTT
GGTAACATTCAATCAATGGCTTATGATTGGATAGGAAATAATTTATATTATTCATCATCC
CTGCCAAAGTATAAAATTTCAGTGCTGAAACTTAAAGGAAATGTCGATGATGGACCAGCT
GTCAAAACTTTAATCAATAAAGATTTTATTGGACCGTCATCTATAGCTCTTGACGTTGAA
AACGGAAAGATGTATTGGACATCATTTGCCGAAAACTATAATATTGGTGGAAAAATAGAA
ACCGCGTGGATGGATGGCACATCACGTAGCACACTTGTTTCAAAGGAGAATGATAGCAGT
AAATTAATTTACTGGCCTGTGTCATTGACTTTTGATAAAGAAAAGAATACATTATATTGG
CTTGATGCTCTCAGTCAAACAATTGATAGCTATAATTTAGATGGCAAGAGAGATCATAAA
CAAAAGAAATTAGGTAATAGTTATGCTCAATCATTGACAGTGCTCTCAAACACAATTTAT
TGGACTGATAATATTAAAAATAGTATTGAGTCATTAAACGATAATAAAAAAGACAACGAC
TCAAAAATTTTTTATCGCTCACCATACAAAAAGAGTTTTCTAAAATCAGTCGATATAAAT
CGTTATCTTGATCATGTAGAAAAAGAAATTCAAGTAACTTGTCCTGGTATATGGCTGAAC
ACACCAATTGATGGTGTTTGTGTTTGTCCCGATGGTTTTAGTAAAAATGCACTTGGGACG
GCTTGTATTCAATCACCTATCGTCAATCCAACGACACCTCGTGACATAATAAAATGTCAA
AAGTTTCAATTTACATGTAAATCGGGTGAAGAATGTATTGACCATAAATATGTTTGTGAT
GGTTCCCAAGATTGCAGTGACGGTAGTGATGAAAAAGAAGCACCTGATGGTCCATGCCCG
AAAAAATGTGATTTTAAATGCGATGGTAATAAATGTATCGATCAACATCAAGTATGTGAT
GGCAACAACGATTGTCTCGACGAATCAGATGAAACAGTGAAAATATGTCATAATAAAACA
AGTTCGGATGAGTATGCAGAAGGCTTTTATGACTATTGTGATGAGTTTTTATGTGAGAAT
TCAAATTGTGTGCTGCTTGAACAGAAATGCGATGGTGTAAACAATTGTGGTGACAATTCT
GACGAAAAAGATTGCTCAGTCATCCCAACTATAGCATCATCGACTGCTTCACATACTGAA
TATAAAGATATAGTCGAAGAAAGTGACACAGAAGATGGATTTGAAGACGTTGATTATAAT
GTGAATTTGACTGAGTGTAAACCACCAAATTATTATTGTGAAAAAGATCGTCGATGCATT
CCAGTTCACAATCTCTGTGATGGTATTAATCAGTGCTCAGATAATTCTGATGAATCGGGA
AGATGTAATGAGAGACTTTGTGATCACTTCTCAGAATGTCAATTTTTCTGCCATAATGCA
CCACATAGGAATGGTTTTGTTTGTTCATGCCCACAACATATGGTACTTGAATCAAATGGA
AGAAATTGTTCTGAACCTCAAATGTGTGATGAATTTTCTACTTGCTCGCACTCGTGCATT
CAATTGAACCCATCAAAAATTAAATGCAAATGTTTCCATGGCTATCAATTAAGTGACGAT
AATTTCACTTGTATTAGTGAACACGAACATCGACCAATATTATTGATAAGCAACCGTCAT
GTTTTGCGCGGAATTAGTTTAAAATCACCAAAAGAAATTAAAAGTTATTATTCAATGTCA
AAAAACCTTATTGGTACTGATTTTTATTATGATCGTCATTCTAAATCCTATGAGATTGTT
TGGTCAGACATTACAAAAGACAAAATTTATTTAGGAAAATTACGTGGTGATGAATTGCAT
AGCATAAGAGCAATCGTAGAATCTGATTTATCAACAACTGAAGCAGTAGCAATTGATTGG
ATAGGAAAGAATTTATATTGGATCGATGCGAGTCTTAAACAAATAGAAGTCGCTACCAAA
GATGGATTACATCGAACAACATTAATATCGGAAAATATATCTAAACCACGGTCAATAGGA
TTAGACTCGAGGTTTGGTTTCCTTTTCTGGTCTGATTGGGAGGATGATGAGCCAAGAATC
GAACGAGCTACATTGGCTGGGGAGAATAGAAAAGCAATTTTTAATTTAAAACAAATCGGT
GGAGCATGGCCTAATGGAATCAGTTTAGATTACGCAAAAAAAAGAATTTTCTTCCTCGAT
GCAAAGTCTAAAGAAATTCACACAATTGATTACGATGGAAATAATCATAAGAGAATTTTA
AGAAATCCCGAATATCTTCATCATCCTTTTGCCATCACAATATATGAGAACAATCTCTAT
TGGACAGATTGGCGATTAAGCAGTGTTATCACAGCAAATAAATTTACTGGAAGCAATGTA
ACTATTTTTTATCAAGCATCTATTCAGCCATTTGATGTTAAAATCATGCATCCGAGTAGA
CAACCTTGGGATTACAATGGAGAAGGAACAGCAAAAGAGATTATTTCACCATGTGAGAAT
TCACCGTGTTCACATTTGTGCCTTCTTAATACAAATAATAGTTATAAATGTGCGTGTCCA
CATTTAATGCGAATCAGTGATAATAATGCGGCCCTGTGCGAAAAAGTTAAGGATATAATG
TTTTACATAACAAATAAATCAGAGATAAGAGCTATAGAGCTTAAGCATCCATATTCTTCA
GCCATATCGACTATTTATCACACTTCACAAATCATTATGCCTAATCATATTGCAATTCAT
CCAAAAGAAAAAAGAATCTTTTGGTCTGATGTACAATTAAGAGAAATTAAAAGTGTTAAA
CTATCAACTTCGATTACACCATCTGATCAAAAAATTGAGACAATACTTGATGCTGAGATT
GATAATGTTCATGGTTTTACAGTTGATTGGATATCAGAACTATTATTTTTCTCTCAAGCA
ATACCTGAAGATGAAGATAAAGACATTAATACAAGTAGTAGCAACAATGGTGGTCACAGA
TTACTTGTATCGAATCTTAAAGGCGAATATTTGTCAAAAGTTCTTGATAATGTCAATGAT
ATTTATAGTTTGATTGTTGCACCTGAATTACGAAAAATCTTTTATACTATTATGAATAAC
GTTACAGCAAAATATCGCTATGAAATTCGCCAATGTAACATGGATGGAACTAATGATACA
TGGATAATTGGAGAAGATGAATACATAAATTCACTTGTATATGAGCATAAACTAAATCGC
CTTTATTTTGTGAAGAATTATCGAAAAATATTCTTTCTCGAGTTGAAAACAAATTATACA
CAATTAGTAAATACATTTTATGGAGCAAAGAAAAGTGCGAACAGCGAAATATACGCAAAC
TTTTTTATCACAAGTTTAGAATTATTTGACGACAAAATCTTTTTTGGTGAAAATTCAACT
GCAACTATTCGCACATGCAATAAAACTACATGTCCTGTGCCAGATATTTATCGTAATAAC
ACGTCAAATATCAAACAACTGAAACTAATGACTCTTTACGACATATCTGAAGATTTGTTG
GACATTAACGGTTGTTCAACTCAACAACAAGGAAACGAAAGAAAATGTGATCATTTGTGC
ATTCCAAAAGGACAAACAAATTATGTCTGTAAATGCGCTATTGGTTATATGACTGACGAA
AGAGATTCATCAAAATGTGTTAGTGAAGACAATTTTCTCATGTATTCCCTCGATTATGAA
TTGAAGGGATTAACTTTGAAAATCCCATCTAAGCACATTCCACTAACACCACTACAAAAG
CTCAGTGTTATTAGTGCATTTGATTTTGATGCTCGAAATGATTTTATTTACTTCTCAGAT
CATGATAAGGGTGAGATTATCAGAATTAAAAAAGATGGAAGCTCTCGGCAAACAATCATG
AGTTCATGGGATTTTGATCAATTGAATAGTGATTGGTTAGGAGGAATTGCAGTCGAATGG
ATGTCGCAAAATATTTTTTGGACTGATCAAAAACGTGGTTTAATAGAAGTAGCGAGATTA
GATGGTTCTTATCGTAAAGTGATTGCATGGCAATTATTTAAACCTACGGGTATTCGAGTT
GATCCATATCTTGGTTTGCTTTTTTATAGTACCGGCGATAATAAAATTTATAGTCATAAT
TTAGACGGAACAAATAAACAACTCGTTACTAAAAAATCTGATATTGCTTTTAGTGACTTT
GTAATTGATATTCCAAATCAAACTATTTATTTATGTGAGACAAAAAGAAACAAAATTTGG
AAACTCGATTATGATGGCAATGGAAAAATAGAATTGAACATAAAAAATGTTCAAAATCCG
ATTGCATTAGATATTGCTGATAAGAAACTTTACTGGGCTGAAAGAGGTACAGGAAAAATA
AAAAGAGTAAGCTTAGATGAAAATCTAGAAGTGGAAGTGCTCAAATCAAACCTTCCGAAT
CAAATAAAAAGCTTGCGAATCTTTTCTACCAAAAAGCAATTTGAAGGAAGCAATCAATGC
AGTATGCCTGATTATGGAAGTTGCTCTGAATTATGTCTCTATAATGGTACAAAAGCAAAT
TGTTTTTGCTCACATGGTTATCTAAATGATCTTGATCAAAGAAGTTGTCGTCGATATGAT
AATGACTTATTTTTCTCTAAAAAGGACGGAATACAAAGAATCAGTGTTGATAATGAAAAT
AACGCATTGTTTTCAATCAAAAATGAAAATCATCTTCAACACGTTGTAGCTTTAAGTTTT
GATGATAAACGCGGACAAATTTTTTATTCTGATGCAAAGTTGAATGCAATTTGCATGACA
AATTATGACGGAACAAAATTTGAACAGCTTATAAAAGATCAAAATGTCGTTGAAGGCATC
GCATTTAATCCACAAGATAATCATCTCTTTTGGACAGTCAATAGTGAGGCAGAGATAAGA
AGTATTGATTTAAAACTTTTTATGAATGGAACAATAGAGAATAAAGATATTAATAAATCG
GTTATAAAAATTCTCAAACTCAAAAAGGGCATAGATAAATTAAGAGCTGTTGTCGTTGAA
CCATGTCTAAATATGGTTTACTATAGTAACTGGAATAGTAAAGCACCATCAATCTCACGA
GTTTATGTCACTGGTTATGGTAATGAAGACATTATCACTAAAGATATTCTCATACCTAAC
GCTCTCACACTCGATCTCAATGATAAGAAAATATTCTGGGCTGACGCAAGACTTGATAAA
ATAGAACGATGCGACTATGATGGAAAGAATTGCATAATTTTATCTCAAACAGCACCAAAG
CATCCTTTTTCGATTGCTGTCTTTGAAGAATTTATCTTTTGGTCTGATTGGACACTTCAT
AGCATTTTGCGTGCGAATAAATATTCTGGTAATGATGTTATTTATTTGAAGAAAGACATT
GAACATCCCATGGGATTATTTGTTGCTCAAGATCAAATCAAAAATTGTACAAATGGCTTA
TGTGCAATATTGAATGGTGGATGTGAGGATATATGTTTACCACATGGGGATAGCATCAAA
TGTGAGTGCTCACAGGGATATCTTGCAAAAGACGGCAAACGATGTTTACAACGAGACAAA
GTATCATCTTGCAATTCAACAATCGAATTTGAGTGCAAAACAGGTGAATGTATTCCTCTG
CTAATAACTTGTGATGGAATTTCACATTGTATTGATAATTCTGATGAGGCCATAAATTAT
TGTGCAACTAGAAAGTGTCCAGAAGAAGTATTCTTTCAATGTAGAAACTTTAAATGTATT
TACAAAAATGAAACTTGTGACCATATTGATCAATGTAGTGATGGTTCGGATGAAGAAAAC
TGTGCTTGCAAAGAAGATGAATTCCGTTGTGGTGGTGGTGAATGTATAAACATAAAATAC
AAATGTGACTTTGATCCCGATTGTAAAGATGCATCAGACGAAATGGGCTGTGAACCAAGA
GATTGCAGTGAAACTGATAATAAGTTTAAAGAAATACAAAGAAATACAAATGAAGAACGA
AGTCTAGTGCCCTGTCCAAATACTACTGCATGTTATATGGTTGATTGGACTTGTGATGGC
GAAAATGATTGTTGGGATTGGAGTGATGAAAAAGATTGTGAAGAGAAGCGTGCAAATAAA
ACATGTAGTGATGACCAGTTTGAATGTTCTAATGGACGTTGCATCAACATTGACTGGGTT
TGTGATGGAGAAGACGACTGTCATGATAGTAGCAATGACAATCCAAGTTCAGATGAAAAA
GATTGTCAGTATCATTGCTCAATGGGTCAATTTTCTTGCGATAATAGCACAGTCTGTATT
CCACTCACTTGGATGTGTGATGGCGTATTAGATTGTAAAGATGGCACAGATGAGAAAAAG
TGTACTAATGGAACAACTTCAAATGAGCCAGTTACATGTGCTCCATATCAAGCGATTTGT
CAGAATGGCGAATGCATTTCAAAGTCTGAGATGTGTGATGGACATTTTGATTGTAGCGAT
TTATCAGATGAGTCAGAGGTCTGCATATTCCCGCCATATTCTGAGGTGGAAGTTGAAATT
AAAATGTGTAATGAATCGGAATTCACGTGCGCGAATAAAGAGTGCATAAGTCATAATGCA
CTTTGTGACTTAAATATCGATTGTTCTGATGGTAGCGATGAGAATACAACAGTATGCGAA
AATTATCCGCTCTATTGCAAAAATAATTCCAACAAGTTTTTATGTCTGAGTGGTAGTTGT
ATTAGTATGAACTTGACATGTGATGGACAGAATGATTGTGGAGATTATTCAGACGAAAGA
AGTTGTAATATCAATGAATGTCTATACGTAGATTGCGAACATAATTGCACAGATTTAAAA
ATTGGTTATGAATGCTCTTGCAATAGAGGATTTAAAAAAAGTGAACTTGATTCTCATAAA
TGTAATGATATCAATGAATGTGAAGATCGACCCTGTTCGCAATTATGTCTTAATACGTAC
GGTTCATATCATTGTGAATGCCTCGAAGGCTATATTAAAACAGGAAATTCATGTAAAATC
GATTCTGCTGAGCATCCAAAAATTATTCTTGCAAATCGTTTTTATATCCGAAGTGTGACT
CTCGATGGACATGCTGAATTGCTTCTTCATAACCTATCAAATGCTGTTGCTATTGATTAC
GACTGGAGTAAAAATTACATTTATTTTTCTGATGTTACGGCTACACGAAGTGAAATTATT
CGAGTTAAATGGAATGAAAATGAGACGAGTAATCGAGAAGTGCTGCATCAACAAAATTTG
AAAAATCCTGATGGAATTGCATTTGATTGGATAGGCAAAAATTTATATTGGTGTGATAAA
GGAAGACAGACGATTGAAGTGTCAAAAGATAGTGGACGATATAGAAAAATATTGATTGAC
GATAAATTGGATGAACCACGAGCTATTGCTTTAGATCCATATAGAAAATACCTGTATTGG
ACTGATTGGGGTAAAAATCCTCATATTGGAAGGGCCGGTATGGATGGTAGCGATGCGAAA
TTTATTGTTACTGAAAATCTTGGTTGGCCAAATGCTCTTACCATTTCTTTTGAGACAAAT
GAATTGTTTTTCGGTGATGCACGTGAAGATTTCATTTCCGTTTGCAATTTAGATGGCAGC
AATAGGAAAGTTGTGGCACATCGTAAATATAATCCAAGTCTTAATCTACATCATATATTT
TCCATTGCTGTGTGGGAAAATCAAATTTATTTTTCTGATTGGGAATCAAAAAGCATAGAA
TATTGCGATAAATATACAGGAAAGAACTGTGGAACGCTTATTAAACTAATTCATCGGCCT
ATGGACTTGAGAATTTTTCATCCGATCAAACAAAGGCGCTTAAAGACAAGTTCATCTTAT
GAAAACTTAATGAAGCGTAAATCGGATATAAAAGGCAAGGACAACAAAAAGAAATTTGAT
GTGGGTAATGTAAAAGATAATCCTTGTGCGACAGCCAATTGTTCTGCTTTATGTTTATTA
TCACCAATATATCCTTACTATAAGTGCGCTTGTCCTGATAATTTTTATCTCGATGATGAT
TTAAAGACATGCATCGATAATTGTACTTCAGCACAATTTTATTGCAAAAAATCAATGAAA
TGCATTCCTTTTTTTTGGAAATGTGACAATCAACCTGACTGTGAATTTAATGAGGATGAA
TTAGATAACTGCACACCATTTTATTGCGAAGCAGGTCAATTTCAATGTGATGTAAAAGAT
AAATCAACAACAAGTGGAACAGGAAAACAATTGGCAAATTGCTTAGATCCATCAAAAATA
TGTGATGGTCAAAAGCAATGTGAGGATGAAACAGATGAGGAAAATTGCGAAAAATACGGT
TGCTTTATAGAATCGTATTTTCAATGCGAAAAAACCGAAAATACTTCCGCATATTGTGTG
CCAAAGAATCGAGTATGTAATGGAGTCATTGATTGTCCTTCGGGCAATGATGAAAAGAGT
TGTCCCTCAAAAGTTTGTTCATCCTCTCAATTTAAATGTGAATCAAATGACGTTTGTATA
CCAAAAGTTTGGCAATGTGATGGAGATGCTGACTGTCTCGATCATTCAGATGAGAAAAAT
TGTACAGAAAGAAAATGTTTCGAAACCGAATTCAGATGCAGTACTGGACGATGTATACCT
TCTACTTGGGTTTGTGATGCTGATAGTGATTGTCCAAATGGAGAGGATGAGGGTGAAAAA
GCCCATTGTGATGCAGTTCCTGTAAGCAATTCATGCGATGCGACCTATTTTAGATGCAAT
AATTCTGGAACATGCATACCTGGTCGATGGAAATGTGATGGAGCAGTAGACTGTGACGAT
GGTTCTGATGAATTGGATTGTCAACAAAGAGCTTGTTCAGAGTCTGAATTTAAATGCAAA
GATGGAAGATGTATTCCTGGTTCATTAAGATGCAACAAAGAATACAATTGTCATGACTTC
AGCGATGAAGAAAACTGTACAGTTTCATGTGATGATTCAGTAATGTTTAAATGTGCAAAC
AAAAATCAATGCGTTGACAAAAGTTTCGTTTGTGATGGTGAACCTGACTGTGAAGATTAT
AGCGATGAAAAAAATTGCGATTGTCAAGGAAACGATTTTAAATGCAGTGGTGAATTCGAA
AAATGCATTTCAAATGACTGGCTTTGTGACGGCATTCATGATTGTCCAGATAAATCTGAT
GAACACGATTCACGTTGTTTAAGTAGATATTGTGCAGGACATGCAATAAAATGTACAAAT
GGAAAATGTATACCAAAATATTATTTTTGTGATGGCATTGATCATTGCGGTGATAACTCT
GATGAAATAAACTGTAATAGCACAAAGCAAATTGATTCTAGCTACATCAATGTTGGTTGT
AAATTTGGAATTTGCAGTCAACTTTGCAACGAAAAGGGCTCAAAAGGAACTGTGCAATGC
AAATGTGCTACTGGCTATCATAAATATGGTTCAATGAGAAATGGTACTTGTAAGGCAATT
GAAGGACAGCATCTGATTTTCACATCATCAGAATCTGAGTTGAGATTCATTTACGAGTTG
AATTATGGAGTAATTGAATCTAACTCTAAAAATTCACAAAGAAAAATTGTGATGCCTGTT
CATAGTTTTATCAAAACAAACTCATCGAAAATCACTTCATTTGATTTTGTGACAGATGAA
GAACACAACATAATACTCTTTTGGCTTGACTCAATGCCGACTAATAATTTACGAAGTTTG
AAAATCAGTACAAAACATGACTTTGATGAGATTAAAAACAAAGGTTTTGATGGTACAAAT
GCAACTATTCTTACGACAAACAAAATGAAAAATACACTTCTGAAGGCTATTAGCATTGAT
TGGATTACAATGAAAATTTATATAATTGAGAATGACATGATTAAGACAACAGATTTTGAT
GGAAATCTTAAAAAGACAGTTGTTGATGCACGTGGCGCTCAAGATTTGGTTATTGATCCA
CAGAGTCGACGAATGTTTTGGTCAACTATAAATAGAAAAATTTTCGTATCGAGCATGGAT
GGCTCTCATAAACAACGACTTGTGACTGAAAATATTGAACTCGCTTCTGGGCTTGCGATT
GACTATCCATCACGTAGAATTTACTGGTGCGATACAAGAAAATCAACAATTGAAACAGTT
AATCTTGAAGGACAAGATAGACAAATTGTAAGAAAATTTGAAGGAGTCAACCCATTAACT
TCATTGCAAGTTAGTCCGGCAAAGCTCGATATTTTTGAGGATGATTTGTACGTTACAATG
ACAAATCAAACTATTTTCAAAATCAATAAATTTGGTTGGCAAAAAGAATACGAGGAAATT
AGTAGTGGGCCATATAAATTCAAAGCTTCTCACATTCGCATAGTTCATACATTCAAATCG
AAAAATTCGCTTCCAAATCCATGTAGGCTTTATCCGTGTGATGAAAGTGCAATTTGTTTT
CTTTCTTCAACGGATCAAACTGGAAGGACTTGTAATTGTCCTGACAGCCTCTATATCCAA
AAGAATGGCACACATGTGTCATGTCGCGATAAATCTGAAATTCCTTCATTGTGCTATAAA
CCATGCACAAACGGAGGTAAATGTAGATACTCTGGTGATGAAATGATTTGTGATTGTCCA
CCACAGTTTGAGGGTGAATATTGTGAGCATTATATTTGCTCAGAATTTTGTAAAAATCAT
GGAGTTTGTTCTTTGCCAAGTAAAACAATGACTCTTTCTAGAGCAGAATTAAAGTTGAAA
AGAACTTGTAGTTGCACATCAGAATGGAAAGGTGCTCGCTGCGAAATTCCCGCATCAATT
TGCAAGGAAAACATGTGTCGTAACGGTGGTCAATGCAATGTTCAATCAAATCCAAATGGA
ACATATACACATTCATGTACTTGTTTATCAAACTTTAGTGGACAATACTGTGAGAATTGT
AGTGCAATCAAGTGCATGAATGGTGGAACATGTTATCGCGATGAAAGTAATAAAAAATAT
CACTGCTTGTGCCCTGAAAGATTTACTGGTATCTTTTGCGAGGTAGACCGATGCAAGAAT
TATTGCAAAAATAATGGCAGATGTTATATCGAAGCAGTTAAAGGACCGAAATGCGATTGT
GAAAATAATTTCTCTGGTGAACGTTGTGAAATTGATGATTTGCCCTGCAAAGAGTGTCCC
GAGAGATTGCCCGATTGCGATATGGTATGTCAAAATAATGGCATGTGTCGAAAAGACATC
AATGGAATCGAGTCGTGTATGTGTGTCGGACAATGGAGTGGTAAACATTGTGAACTACCA
CCGAAATGTGTTGATGATGAATGTGGAAAATGCAACGAAACTTCATCAATTAACGAATGC
TTATGTCGTAATGGGTTAGTTCAAGCTTGCGTGATTTTCAACGAAAACTCACAAAATCAT
CCGGAAGTTGTTGCATCGGAAATGTTTAATGATGAGCATGAAACATTGTCTATCATCGTT
ATTCTTTCATTAACATTCTTGTTAATGTCAACACTTGCTATTCTGGCAGTGTTTTATGTA
CGAAAATGGCAAAGACGAGTACGATTTTTTGCACATGCCCGATTAAATGAAAATGTTGAA
GAAATTACAAATCCAATTTTTGATTTCTCGGCAACGGATCGTGATGACATTAATTTACCA
GTAACAAGCATTTCAAATAGTGATGACAAAGGTCATTTTTCAAATCCAATTTACGAGTCA
ATGTACTCATCCTCACATAGACAAGGACTTCTTGAAAGAAAGTCAGATGATGATGAGGAA
GAGTCAAAAAATGAGCTATTATAA
>g7075.t1 Gene=g7075 Length=4627
MKFKNISRFKLFMTLIIILSCVISCSFASKKYNIKTFDKLTRKSDESLSLDSLSSVSSAA
ATCSEFQFQCKSNAVCIPLQMRCDLSNDCEDGSDENSTECKRIPVIQSECDNENFFHCKL
SKKCIPNEWLCDGENDCGLIGKFDLLDPSDENVNCIKKCPVNQVSCSNGICLHISKFCDG
HSDCQDDELFCGNKASCKNLKCEYACKSTPHGPKCFCPPNQDIVNETKCVAQKACKEDEN
DGEICDQLCSIVKNRNKCICAPGYERSNQKCYGINSPITEPTLLFVLTPQEIYKIILPSD
RNNSENTSPVTLTQVLKLKNLITMEVNFSNHTVCVLEDYEIFCYNVSNFMDKWKMPNPDF
LPLESASSSNILISQFALDWVSQNWYFMDTINNFIFLCSHEMKNCRIIIQTSQNDPIKVR
AFVIDPTSGFLFLAKYDTNNRTSASIVRYFLDGTNDISLLKGKIFYPHDLTLDVAVKKIY
FLDHYFDFIQQCDYDGSNRKFLQKLPFMKFHRINFFENMFFGAVNENTSVVQISKSSAIF
IKTLAENLKANTKVLKIFHQQTQPTTKTKVCVKDNNCEHLCVPTIEENNNGVSKLLEKCI
CKEGFKLKNGKCILRDSKSFIMFVQEYAKSRTLKAIVTDGSKEEVFTPITGLKSNIAFDV
DLNNKLIYFTTYTESNIIRNNTIECRSFNGSYKTIIKGNFGNIQSMAYDWIGNNLYYSSS
LPKYKISVLKLKGNVDDGPAVKTLINKDFIGPSSIALDVENGKMYWTSFAENYNIGGKIE
TAWMDGTSRSTLVSKENDSSKLIYWPVSLTFDKEKNTLYWLDALSQTIDSYNLDGKRDHK
QKKLGNSYAQSLTVLSNTIYWTDNIKNSIESLNDNKKDNDSKIFYRSPYKKSFLKSVDIN
RYLDHVEKEIQVTCPGIWLNTPIDGVCVCPDGFSKNALGTACIQSPIVNPTTPRDIIKCQ
KFQFTCKSGEECIDHKYVCDGSQDCSDGSDEKEAPDGPCPKKCDFKCDGNKCIDQHQVCD
GNNDCLDESDETVKICHNKTSSDEYAEGFYDYCDEFLCENSNCVLLEQKCDGVNNCGDNS
DEKDCSVIPTIASSTASHTEYKDIVEESDTEDGFEDVDYNVNLTECKPPNYYCEKDRRCI
PVHNLCDGINQCSDNSDESGRCNERLCDHFSECQFFCHNAPHRNGFVCSCPQHMVLESNG
RNCSEPQMCDEFSTCSHSCIQLNPSKIKCKCFHGYQLSDDNFTCISEHEHRPILLISNRH
VLRGISLKSPKEIKSYYSMSKNLIGTDFYYDRHSKSYEIVWSDITKDKIYLGKLRGDELH
SIRAIVESDLSTTEAVAIDWIGKNLYWIDASLKQIEVATKDGLHRTTLISENISKPRSIG
LDSRFGFLFWSDWEDDEPRIERATLAGENRKAIFNLKQIGGAWPNGISLDYAKKRIFFLD
AKSKEIHTIDYDGNNHKRILRNPEYLHHPFAITIYENNLYWTDWRLSSVITANKFTGSNV
TIFYQASIQPFDVKIMHPSRQPWDYNGEGTAKEIISPCENSPCSHLCLLNTNNSYKCACP
HLMRISDNNAALCEKVKDIMFYITNKSEIRAIELKHPYSSAISTIYHTSQIIMPNHIAIH
PKEKRIFWSDVQLREIKSVKLSTSITPSDQKIETILDAEIDNVHGFTVDWISELLFFSQA
IPEDEDKDINTSSSNNGGHRLLVSNLKGEYLSKVLDNVNDIYSLIVAPELRKIFYTIMNN
VTAKYRYEIRQCNMDGTNDTWIIGEDEYINSLVYEHKLNRLYFVKNYRKIFFLELKTNYT
QLVNTFYGAKKSANSEIYANFFITSLELFDDKIFFGENSTATIRTCNKTTCPVPDIYRNN
TSNIKQLKLMTLYDISEDLLDINGCSTQQQGNERKCDHLCIPKGQTNYVCKCAIGYMTDE
RDSSKCVSEDNFLMYSLDYELKGLTLKIPSKHIPLTPLQKLSVISAFDFDARNDFIYFSD
HDKGEIIRIKKDGSSRQTIMSSWDFDQLNSDWLGGIAVEWMSQNIFWTDQKRGLIEVARL
DGSYRKVIAWQLFKPTGIRVDPYLGLLFYSTGDNKIYSHNLDGTNKQLVTKKSDIAFSDF
VIDIPNQTIYLCETKRNKIWKLDYDGNGKIELNIKNVQNPIALDIADKKLYWAERGTGKI
KRVSLDENLEVEVLKSNLPNQIKSLRIFSTKKQFEGSNQCSMPDYGSCSELCLYNGTKAN
CFCSHGYLNDLDQRSCRRYDNDLFFSKKDGIQRISVDNENNALFSIKNENHLQHVVALSF
DDKRGQIFYSDAKLNAICMTNYDGTKFEQLIKDQNVVEGIAFNPQDNHLFWTVNSEAEIR
SIDLKLFMNGTIENKDINKSVIKILKLKKGIDKLRAVVVEPCLNMVYYSNWNSKAPSISR
VYVTGYGNEDIITKDILIPNALTLDLNDKKIFWADARLDKIERCDYDGKNCIILSQTAPK
HPFSIAVFEEFIFWSDWTLHSILRANKYSGNDVIYLKKDIEHPMGLFVAQDQIKNCTNGL
CAILNGGCEDICLPHGDSIKCECSQGYLAKDGKRCLQRDKVSSCNSTIEFECKTGECIPL
LITCDGISHCIDNSDEAINYCATRKCPEEVFFQCRNFKCIYKNETCDHIDQCSDGSDEEN
CACKEDEFRCGGGECINIKYKCDFDPDCKDASDEMGCEPRDCSETDNKFKEIQRNTNEER
SLVPCPNTTACYMVDWTCDGENDCWDWSDEKDCEEKRANKTCSDDQFECSNGRCINIDWV
CDGEDDCHDSSNDNPSSDEKDCQYHCSMGQFSCDNSTVCIPLTWMCDGVLDCKDGTDEKK
CTNGTTSNEPVTCAPYQAICQNGECISKSEMCDGHFDCSDLSDESEVCIFPPYSEVEVEI
KMCNESEFTCANKECISHNALCDLNIDCSDGSDENTTVCENYPLYCKNNSNKFLCLSGSC
ISMNLTCDGQNDCGDYSDERSCNINECLYVDCEHNCTDLKIGYECSCNRGFKKSELDSHK
CNDINECEDRPCSQLCLNTYGSYHCECLEGYIKTGNSCKIDSAEHPKIILANRFYIRSVT
LDGHAELLLHNLSNAVAIDYDWSKNYIYFSDVTATRSEIIRVKWNENETSNREVLHQQNL
KNPDGIAFDWIGKNLYWCDKGRQTIEVSKDSGRYRKILIDDKLDEPRAIALDPYRKYLYW
TDWGKNPHIGRAGMDGSDAKFIVTENLGWPNALTISFETNELFFGDAREDFISVCNLDGS
NRKVVAHRKYNPSLNLHHIFSIAVWENQIYFSDWESKSIEYCDKYTGKNCGTLIKLIHRP
MDLRIFHPIKQRRLKTSSSYENLMKRKSDIKGKDNKKKFDVGNVKDNPCATANCSALCLL
SPIYPYYKCACPDNFYLDDDLKTCIDNCTSAQFYCKKSMKCIPFFWKCDNQPDCEFNEDE
LDNCTPFYCEAGQFQCDVKDKSTTSGTGKQLANCLDPSKICDGQKQCEDETDEENCEKYG
CFIESYFQCEKTENTSAYCVPKNRVCNGVIDCPSGNDEKSCPSKVCSSSQFKCESNDVCI
PKVWQCDGDADCLDHSDEKNCTERKCFETEFRCSTGRCIPSTWVCDADSDCPNGEDEGEK
AHCDAVPVSNSCDATYFRCNNSGTCIPGRWKCDGAVDCDDGSDELDCQQRACSESEFKCK
DGRCIPGSLRCNKEYNCHDFSDEENCTVSCDDSVMFKCANKNQCVDKSFVCDGEPDCEDY
SDEKNCDCQGNDFKCSGEFEKCISNDWLCDGIHDCPDKSDEHDSRCLSRYCAGHAIKCTN
GKCIPKYYFCDGIDHCGDNSDEINCNSTKQIDSSYINVGCKFGICSQLCNEKGSKGTVQC
KCATGYHKYGSMRNGTCKAIEGQHLIFTSSESELRFIYELNYGVIESNSKNSQRKIVMPV
HSFIKTNSSKITSFDFVTDEEHNIILFWLDSMPTNNLRSLKISTKHDFDEIKNKGFDGTN
ATILTTNKMKNTLLKAISIDWITMKIYIIENDMIKTTDFDGNLKKTVVDARGAQDLVIDP
QSRRMFWSTINRKIFVSSMDGSHKQRLVTENIELASGLAIDYPSRRIYWCDTRKSTIETV
NLEGQDRQIVRKFEGVNPLTSLQVSPAKLDIFEDDLYVTMTNQTIFKINKFGWQKEYEEI
SSGPYKFKASHIRIVHTFKSKNSLPNPCRLYPCDESAICFLSSTDQTGRTCNCPDSLYIQ
KNGTHVSCRDKSEIPSLCYKPCTNGGKCRYSGDEMICDCPPQFEGEYCEHYICSEFCKNH
GVCSLPSKTMTLSRAELKLKRTCSCTSEWKGARCEIPASICKENMCRNGGQCNVQSNPNG
TYTHSCTCLSNFSGQYCENCSAIKCMNGGTCYRDESNKKYHCLCPERFTGIFCEVDRCKN
YCKNNGRCYIEAVKGPKCDCENNFSGERCEIDDLPCKECPERLPDCDMVCQNNGMCRKDI
NGIESCMCVGQWSGKHCELPPKCVDDECGKCNETSSINECLCRNGLVQACVIFNENSQNH
PEVVASEMFNDEHETLSIIVILSLTFLLMSTLAILAVFYVRKWQRRVRFFAHARLNENVE
EITNPIFDFSATDRDDINLPVTSISNSDDKGHFSNPIYESMYSSSHRQGLLERKSDDDEE
ESKNELL
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 159 | g7075.t1 | CDD | cd00112 | LDLa | 63 | 96 | 3.64596E-6 |
| 150 | g7075.t1 | CDD | cd00112 | LDLa | 113 | 155 | 6.02562E-4 |
| 143 | g7075.t1 | CDD | cd00112 | LDLa | 159 | 191 | 4.19973E-5 |
| 154 | g7075.t1 | CDD | cd00112 | LDLa | 959 | 992 | 4.34284E-7 |
| 152 | g7075.t1 | CDD | cd00112 | LDLa | 1005 | 1031 | 6.44073E-6 |
| 149 | g7075.t1 | CDD | cd00112 | LDLa | 1054 | 1085 | 2.10304E-7 |
| 145 | g7075.t1 | CDD | cd00112 | LDLa | 1126 | 1160 | 2.4383E-4 |
| 161 | g7075.t1 | CDD | cd00112 | LDLa | 2569 | 2597 | 2.5361E-4 |
| 153 | g7075.t1 | CDD | cd00112 | LDLa | 2612 | 2641 | 3.1471E-6 |
| 157 | g7075.t1 | CDD | cd00112 | LDLa | 2643 | 2677 | 3.09189E-9 |
| 164 | g7075.t1 | CDD | cd00112 | LDLa | 2705 | 2733 | 0.0044885 |
| 141 | g7075.t1 | CDD | cd00112 | LDLa | 2742 | 2782 | 1.30722E-9 |
| 160 | g7075.t1 | CDD | cd00112 | LDLa | 2786 | 2821 | 3.97823E-8 |
| 156 | g7075.t1 | CDD | cd00112 | LDLa | 2833 | 2864 | 1.78183E-6 |
| 147 | g7075.t1 | CDD | cd00112 | LDLa | 2883 | 2915 | 6.68451E-7 |
| 155 | g7075.t1 | CDD | cd00112 | LDLa | 2930 | 2962 | 2.68678E-7 |
| 165 | g7075.t1 | CDD | cd00054 | EGF_CA | 3003 | 3039 | 4.21561E-5 |
| 151 | g7075.t1 | CDD | cd00112 | LDLa | 3388 | 3422 | 9.12541E-5 |
| 163 | g7075.t1 | CDD | cd00112 | LDLa | 3429 | 3476 | 0.00117643 |
| 144 | g7075.t1 | CDD | cd00112 | LDLa | 3526 | 3561 | 5.61622E-9 |
| 140 | g7075.t1 | CDD | cd00112 | LDLa | 3566 | 3597 | 2.96563E-8 |
| 142 | g7075.t1 | CDD | cd00112 | LDLa | 3612 | 3647 | 9.65308E-10 |
| 146 | g7075.t1 | CDD | cd00112 | LDLa | 3652 | 3686 | 2.07024E-9 |
| 158 | g7075.t1 | CDD | cd00112 | LDLa | 3696 | 3726 | 2.60894E-7 |
| 162 | g7075.t1 | CDD | cd00112 | LDLa | 3728 | 3763 | 2.77034E-6 |
| 148 | g7075.t1 | CDD | cd00112 | LDLa | 3771 | 3805 | 1.04043E-8 |
| 132 | g7075.t1 | Coils | Coil | Coil | 4623 | 4627 | - |
| 117 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 58 | 102 | 2.0E-11 |
| 112 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 104 | 155 | 2.3E-8 |
| 131 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 157 | 195 | 3.0E-5 |
| 104 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 268 | 612 | 1.4E-43 |
| 105 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 613 | 945 | 6.5E-55 |
| 121 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 956 | 995 | 1.1E-10 |
| 107 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1005 | 1039 | 2.8E-7 |
| 124 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1052 | 1095 | 2.4E-8 |
| 122 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 1122 | 1162 | 8.1E-7 |
| 90 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 1171 | 1205 | 9.1E-7 |
| 96 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 1210 | 1251 | 7.2E-7 |
| 103 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 1252 | 1577 | 2.4E-90 |
| 98 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 1578 | 1913 | 3.3E-39 |
| 100 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 1918 | 2240 | 1.3E-70 |
| 102 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 2241 | 2561 | 2.6E-72 |
| 111 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2562 | 2604 | 2.7E-8 |
| 119 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2609 | 2646 | 1.2E-7 |
| 109 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2647 | 2680 | 1.5E-10 |
| 110 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2697 | 2737 | 7.1E-7 |
| 129 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2738 | 2784 | 4.6E-10 |
| 108 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2785 | 2823 | 9.8E-13 |
| 126 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2828 | 2869 | 7.4E-10 |
| 114 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2879 | 2922 | 2.0E-10 |
| 120 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 2925 | 2963 | 8.2E-10 |
| 89 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 2964 | 3003 | 1.8E-6 |
| 92 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 3004 | 3041 | 8.4E-9 |
| 99 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 3046 | 3310 | 1.9E-90 |
| 95 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 3344 | 3390 | 1.3E-9 |
| 125 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3391 | 3432 | 2.0E-8 |
| 106 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3433 | 3476 | 1.1E-5 |
| 130 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3481 | 3523 | 1.1E-7 |
| 118 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3524 | 3563 | 5.3E-14 |
| 116 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3564 | 3597 | 5.1E-11 |
| 123 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3609 | 3654 | 3.5E-14 |
| 115 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3655 | 3688 | 1.2E-11 |
| 113 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3689 | 3725 | 2.3E-9 |
| 127 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3726 | 3768 | 8.6E-8 |
| 128 | g7075.t1 | Gene3D | G3DSA:4.10.400.10 | - | 3769 | 3814 | 4.0E-11 |
| 101 | g7075.t1 | Gene3D | G3DSA:2.120.10.30 | TolB | 3851 | 4211 | 7.8E-49 |
| 97 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 4212 | 4251 | 1.6E-5 |
| 93 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 4252 | 4340 | 5.3E-8 |
| 91 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 4343 | 4377 | 9.4E-9 |
| 88 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 4378 | 4414 | 2.7E-7 |
| 94 | g7075.t1 | Gene3D | G3DSA:2.10.25.10 | Laminin | 4421 | 4462 | 1.2E-5 |
| 268 | g7075.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 4601 | 4627 | - |
| 267 | g7075.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 4609 | 4627 | - |
| 36 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 61 | 187 | 0.0 |
| 26 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 195 | 935 | 0.0 |
| 35 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 959 | 1086 | 0.0 |
| 38 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 1055 | 1179 | 0.0 |
| 30 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 1171 | 1552 | 0.0 |
| 31 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 1538 | 1921 | 0.0 |
| 39 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 1908 | 2235 | 0.0 |
| 41 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 2221 | 2335 | 0.0 |
| 40 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 2362 | 2679 | 0.0 |
| 34 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 2707 | 2822 | 0.0 |
| 42 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 2822 | 2964 | 0.0 |
| 25 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 2962 | 3061 | 0.0 |
| 33 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 3066 | 3311 | 0.0 |
| 29 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 3341 | 3492 | 0.0 |
| 32 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 3498 | 3604 | 0.0 |
| 27 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 3610 | 3727 | 0.0 |
| 28 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 3725 | 3809 | 0.0 |
| 37 | g7075.t1 | PANTHER | PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | 3826 | 4392 | 0.0 |
| 45 | g7075.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 2709 | 2730 | 2.9E-37 |
| 43 | g7075.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 2752 | 2773 | 2.9E-37 |
| 48 | g7075.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 2797 | 2818 | 2.9E-37 |
| 46 | g7075.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 2843 | 2864 | 2.9E-37 |
| 47 | g7075.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 2893 | 2914 | 2.9E-37 |
| 44 | g7075.t1 | PRINTS | PR00261 | Low density lipoprotein (LDL) receptor signature | 2938 | 2959 | 2.9E-37 |
| 19 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 62 | 100 | 4.4E-9 |
| 1 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 958 | 993 | 3.2E-10 |
| 9 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1002 | 1034 | 1.1E-5 |
| 10 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 1125 | 1162 | 2.9E-5 |
| 21 | g7075.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 1344 | 1382 | 9.0E-8 |
| 24 | g7075.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 1386 | 1431 | 2.1E-7 |
| 11 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2563 | 2599 | 6.1E-7 |
| 14 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2643 | 2677 | 6.2E-10 |
| 20 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2705 | 2733 | 1.3E-5 |
| 7 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2740 | 2782 | 2.5E-7 |
| 18 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2785 | 2821 | 1.4E-9 |
| 3 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2832 | 2868 | 3.4E-7 |
| 4 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2882 | 2915 | 2.6E-7 |
| 16 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 2926 | 2962 | 1.9E-9 |
| 23 | g7075.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 3134 | 3173 | 1.2E-5 |
| 22 | g7075.t1 | Pfam | PF00058 | Low-density lipoprotein receptor repeat class B | 3177 | 3215 | 5.4E-11 |
| 6 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3387 | 3424 | 5.8E-6 |
| 8 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3525 | 3561 | 1.8E-10 |
| 12 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3565 | 3603 | 1.7E-9 |
| 13 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3611 | 3647 | 1.9E-10 |
| 15 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3651 | 3686 | 1.0E-9 |
| 17 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3690 | 3726 | 3.8E-8 |
| 2 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3727 | 3766 | 8.6E-7 |
| 5 | g7075.t1 | Pfam | PF00057 | Low-density lipoprotein receptor domain class A | 3771 | 3805 | 6.8E-8 |
| 135 | g7075.t1 | Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 28 | - |
| 136 | g7075.t1 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 10 | - |
| 137 | g7075.t1 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 11 | 23 | - |
| 139 | g7075.t1 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 24 | 28 | - |
| 134 | g7075.t1 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 29 | 4515 | - |
| 138 | g7075.t1 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 4516 | 4540 | - |
| 133 | g7075.t1 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 4541 | 4627 | - |
| 257 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 76 | 100 | - |
| 256 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1012 | 1036 | - |
| 262 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1063 | 1085 | - |
| 259 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 1139 | 1162 | - |
| 254 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 2577 | 2601 | - |
| 253 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 2655 | 2677 | - |
| 258 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 2799 | 2821 | - |
| 260 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 2940 | 2962 | - |
| 265 | g7075.t1 | ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 3003 | 3025 | - |
| 266 | g7075.t1 | ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 3016 | 3027 | - |
| 248 | g7075.t1 | ProSitePatterns | PS01186 | EGF-like domain signature 2. | 3025 | 3038 | - |
| 255 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3539 | 3561 | - |
| 263 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3625 | 3647 | - |
| 261 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3742 | 3766 | - |
| 264 | g7075.t1 | ProSitePatterns | PS01209 | LDL-receptor class A (LDLRA) domain signature. | 3783 | 3805 | - |
| 250 | g7075.t1 | ProSitePatterns | PS00022 | EGF-like domain signature 1. | 4237 | 4248 | - |
| 249 | g7075.t1 | ProSitePatterns | PS00022 | EGF-like domain signature 1. | 4326 | 4337 | - |
| 251 | g7075.t1 | ProSitePatterns | PS00022 | EGF-like domain signature 1. | 4398 | 4409 | - |
| 252 | g7075.t1 | ProSitePatterns | PS00022 | EGF-like domain signature 1. | 4446 | 4457 | - |
| 299 | g7075.t1 | ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | 6.0 |
| 309 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 62 | 101 | 12.637 |
| 310 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 109 | 138 | 9.125 |
| 320 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 158 | 198 | 9.213 |
| 271 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 429 | 476 | 6.002 |
| 290 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 477 | 502 | 7.023 |
| 295 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 665 | 712 | 5.445 |
| 282 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 713 | 761 | 6.722 |
| 286 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 762 | 815 | 8.764 |
| 293 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 816 | 858 | 8.091 |
| 292 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 859 | 901 | 4.401 |
| 321 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 958 | 1000 | 12.4 |
| 300 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 998 | 1037 | 11.913 |
| 308 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1052 | 1086 | 11.95 |
| 324 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 1125 | 1163 | 11.363 |
| 283 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1297 | 1342 | 9.46 |
| 279 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1343 | 1385 | 14.333 |
| 288 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1386 | 1433 | 11.618 |
| 298 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1434 | 1478 | 10.736 |
| 280 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1479 | 1519 | 6.026 |
| 270 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1578 | 1623 | 4.355 |
| 273 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1624 | 1672 | 8.973 |
| 291 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 1974 | 2022 | 7.395 |
| 275 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2023 | 2064 | 12.407 |
| 277 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2065 | 2106 | 5.562 |
| 276 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2107 | 2145 | 5.144 |
| 289 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2148 | 2191 | 8.021 |
| 294 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2285 | 2326 | 8.207 |
| 272 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2384 | 2428 | 9.181 |
| 296 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2429 | 2471 | 12.477 |
| 284 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 2472 | 2512 | 7.604 |
| 322 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2563 | 2602 | 11.65 |
| 305 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2605 | 2642 | 11.738 |
| 302 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2642 | 2678 | 12.938 |
| 304 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2681 | 2734 | 9.725 |
| 312 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2741 | 2783 | 13.113 |
| 319 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2785 | 2822 | 13.575 |
| 325 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2832 | 2869 | 11.713 |
| 307 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2882 | 2920 | 12.213 |
| 318 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 2925 | 2963 | 12.812 |
| 329 | g7075.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 3003 | 3039 | 9.408 |
| 281 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3085 | 3132 | 9.46 |
| 287 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3133 | 3175 | 14.263 |
| 285 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3176 | 3219 | 14.078 |
| 274 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3220 | 3245 | 7.488 |
| 297 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 3267 | 3309 | 4.819 |
| 314 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3387 | 3425 | 11.175 |
| 303 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3428 | 3477 | 11.338 |
| 301 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3480 | 3522 | 11.562 |
| 317 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3525 | 3562 | 13.55 |
| 306 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3565 | 3604 | 13.3 |
| 313 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3611 | 3648 | 14.275 |
| 316 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3651 | 3687 | 12.812 |
| 315 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3689 | 3727 | 13.113 |
| 323 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3727 | 3767 | 12.45 |
| 311 | g7075.t1 | ProSiteProfiles | PS50068 | LDL-receptor class A (LDLRA) domain profile. | 3770 | 3806 | 12.438 |
| 269 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 4023 | 4064 | 11.827 |
| 278 | g7075.t1 | ProSiteProfiles | PS51120 | LDL-receptor class B (LDLRB) repeat profile. | 4065 | 4108 | 10.806 |
| 331 | g7075.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 4214 | 4249 | 13.326 |
| 326 | g7075.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 4297 | 4338 | 14.431 |
| 330 | g7075.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 4339 | 4371 | 7.68 |
| 328 | g7075.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 4374 | 4410 | 17.321 |
| 327 | g7075.t1 | ProSiteProfiles | PS50026 | EGF-like domain profile. | 4422 | 4458 | 13.496 |
| 170 | g7075.t1 | SMART | SM00192 | LDLa_2 | 62 | 102 | 4.4E-12 |
| 189 | g7075.t1 | SMART | SM00192 | LDLa_2 | 109 | 157 | 9.9E-8 |
| 168 | g7075.t1 | SMART | SM00192 | LDLa_2 | 158 | 193 | 7.8E-5 |
| 242 | g7075.t1 | SMART | SM00181 | egf_5 | 196 | 230 | 93.0 |
| 232 | g7075.t1 | SMART | SM00181 | egf_5 | 234 | 272 | 26.0 |
| 222 | g7075.t1 | SMART | SM00135 | LY_2 | 406 | 456 | 24.0 |
| 219 | g7075.t1 | SMART | SM00135 | LY_2 | 457 | 499 | 1.1E-4 |
| 244 | g7075.t1 | SMART | SM00181 | egf_5 | 570 | 613 | 10.0 |
| 204 | g7075.t1 | SMART | SM00135 | LY_2 | 693 | 736 | 1.1 |
| 203 | g7075.t1 | SMART | SM00135 | LY_2 | 742 | 789 | 5.3E-6 |
| 224 | g7075.t1 | SMART | SM00135 | LY_2 | 790 | 838 | 0.032 |
| 192 | g7075.t1 | SMART | SM00192 | LDLa_2 | 958 | 996 | 1.3E-9 |
| 182 | g7075.t1 | SMART | SM00192 | LDLa_2 | 1002 | 1038 | 9.5E-9 |
| 169 | g7075.t1 | SMART | SM00192 | LDLa_2 | 1052 | 1087 | 5.5E-9 |
| 178 | g7075.t1 | SMART | SM00192 | LDLa_2 | 1125 | 1164 | 4.0E-7 |
| 240 | g7075.t1 | SMART | SM00181 | egf_5 | 1166 | 1204 | 13.0 |
| 247 | g7075.t1 | SMART | SM00181 | egf_5 | 1208 | 1245 | 0.12 |
| 218 | g7075.t1 | SMART | SM00135 | LY_2 | 1323 | 1365 | 6.0E-12 |
| 213 | g7075.t1 | SMART | SM00135 | LY_2 | 1366 | 1410 | 5.3E-9 |
| 208 | g7075.t1 | SMART | SM00135 | LY_2 | 1411 | 1456 | 9.5E-6 |
| 210 | g7075.t1 | SMART | SM00135 | LY_2 | 1457 | 1500 | 8.0E-8 |
| 237 | g7075.t1 | SMART | SM00181 | egf_5 | 1537 | 1574 | 0.0025 |
| 212 | g7075.t1 | SMART | SM00135 | LY_2 | 1604 | 1646 | 4.6E-4 |
| 206 | g7075.t1 | SMART | SM00135 | LY_2 | 1653 | 1700 | 0.042 |
| 195 | g7075.t1 | SMART | SM00179 | egfca_6 | 1881 | 1927 | 0.019 |
| 246 | g7075.t1 | SMART | SM00181 | egf_5 | 1884 | 1927 | 0.31 |
| 215 | g7075.t1 | SMART | SM00135 | LY_2 | 1951 | 1996 | 0.12 |
| 216 | g7075.t1 | SMART | SM00135 | LY_2 | 1997 | 2045 | 1.4E-8 |
| 209 | g7075.t1 | SMART | SM00135 | LY_2 | 2046 | 2086 | 21.0 |
| 211 | g7075.t1 | SMART | SM00135 | LY_2 | 2088 | 2129 | 7.3 |
| 217 | g7075.t1 | SMART | SM00135 | LY_2 | 2130 | 2170 | 0.0084 |
| 236 | g7075.t1 | SMART | SM00181 | egf_5 | 2199 | 2237 | 69.0 |
| 221 | g7075.t1 | SMART | SM00135 | LY_2 | 2264 | 2307 | 0.29 |
| 199 | g7075.t1 | SMART | SM00135 | LY_2 | 2308 | 2349 | 17.0 |
| 214 | g7075.t1 | SMART | SM00135 | LY_2 | 2363 | 2408 | 7.6 |
| 223 | g7075.t1 | SMART | SM00135 | LY_2 | 2409 | 2451 | 1.3E-11 |
| 202 | g7075.t1 | SMART | SM00135 | LY_2 | 2452 | 2493 | 0.021 |
| 234 | g7075.t1 | SMART | SM00181 | egf_5 | 2520 | 2556 | 2.9 |
| 184 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2563 | 2603 | 5.5E-8 |
| 175 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2605 | 2641 | 1.4E-5 |
| 191 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2642 | 2679 | 1.6E-11 |
| 174 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2696 | 2735 | 0.0018 |
| 179 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2741 | 2784 | 9.2E-9 |
| 238 | g7075.t1 | SMART | SM00181 | egf_5 | 2741 | 2783 | 170.0 |
| 172 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2785 | 2823 | 1.3E-14 |
| 180 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2832 | 2870 | 2.4E-9 |
| 171 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2882 | 2921 | 4.2E-10 |
| 177 | g7075.t1 | SMART | SM00192 | LDLa_2 | 2925 | 2964 | 2.5E-10 |
| 196 | g7075.t1 | SMART | SM00179 | egfca_6 | 2963 | 3002 | 5.7E-4 |
| 241 | g7075.t1 | SMART | SM00181 | egf_5 | 2966 | 3002 | 0.23 |
| 194 | g7075.t1 | SMART | SM00179 | egfca_6 | 3003 | 3039 | 2.4E-10 |
| 231 | g7075.t1 | SMART | SM00181 | egf_5 | 3006 | 3039 | 9.5E-4 |
| 198 | g7075.t1 | SMART | SM00135 | LY_2 | 3065 | 3109 | 1.1 |
| 225 | g7075.t1 | SMART | SM00135 | LY_2 | 3113 | 3155 | 1.5E-11 |
| 205 | g7075.t1 | SMART | SM00135 | LY_2 | 3156 | 3199 | 5.5E-14 |
| 201 | g7075.t1 | SMART | SM00135 | LY_2 | 3200 | 3242 | 8.2E-9 |
| 207 | g7075.t1 | SMART | SM00135 | LY_2 | 3247 | 3290 | 2.4 |
| 245 | g7075.t1 | SMART | SM00181 | egf_5 | 3348 | 3385 | 0.36 |
| 186 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3387 | 3426 | 1.5E-9 |
| 190 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3428 | 3478 | 7.8E-5 |
| 188 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3480 | 3523 | 1.2E-5 |
| 185 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3525 | 3563 | 2.1E-13 |
| 183 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3565 | 3605 | 7.5E-13 |
| 173 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3611 | 3649 | 3.6E-13 |
| 239 | g7075.t1 | SMART | SM00181 | egf_5 | 3611 | 3648 | 140.0 |
| 181 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3651 | 3688 | 1.4E-12 |
| 176 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3689 | 3726 | 6.9E-8 |
| 187 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3727 | 3768 | 1.2E-5 |
| 193 | g7075.t1 | SMART | SM00192 | LDLa_2 | 3770 | 3807 | 3.0E-11 |
| 229 | g7075.t1 | SMART | SM00181 | egf_5 | 3819 | 3858 | 17.0 |
| 200 | g7075.t1 | SMART | SM00135 | LY_2 | 3961 | 4004 | 68.0 |
| 197 | g7075.t1 | SMART | SM00135 | LY_2 | 4005 | 4044 | 0.0064 |
| 220 | g7075.t1 | SMART | SM00135 | LY_2 | 4045 | 4087 | 5.7E-11 |
| 243 | g7075.t1 | SMART | SM00181 | egf_5 | 4167 | 4209 | 23.0 |
| 228 | g7075.t1 | SMART | SM00181 | egf_5 | 4217 | 4249 | 0.062 |
| 230 | g7075.t1 | SMART | SM00181 | egf_5 | 4252 | 4295 | 0.25 |
| 233 | g7075.t1 | SMART | SM00181 | egf_5 | 4300 | 4338 | 0.12 |
| 226 | g7075.t1 | SMART | SM00181 | egf_5 | 4339 | 4374 | 1.5E-4 |
| 235 | g7075.t1 | SMART | SM00181 | egf_5 | 4377 | 4410 | 0.014 |
| 227 | g7075.t1 | SMART | SM00181 | egf_5 | 4425 | 4458 | 24.0 |
| 74 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 60 | 98 | 1.7E-8 |
| 72 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 154 | 188 | 3.67E-5 |
| 51 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 339 | 547 | 3.66E-16 |
| 53 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 635 | 873 | 2.75E-28 |
| 66 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 956 | 993 | 1.44E-8 |
| 69 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1001 | 1036 | 2.23E-5 |
| 75 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1054 | 1088 | 1.44E-7 |
| 62 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 1124 | 1160 | 6.15E-7 |
| 81 | g7075.t1 | SUPERFAMILY | SSF57184 | Growth factor receptor domain | 1213 | 1927 | 2.04E-10 |
| 50 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 1253 | 1522 | 1.31E-39 |
| 52 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 1583 | 1860 | 4.19E-20 |
| 54 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 1951 | 2179 | 9.81E-34 |
| 56 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 2243 | 2512 | 1.44E-33 |
| 64 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2564 | 2601 | 3.01E-7 |
| 61 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2607 | 2643 | 6.15E-6 |
| 73 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2643 | 2678 | 1.31E-7 |
| 59 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2703 | 2734 | 1.31E-5 |
| 78 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2739 | 2774 | 2.62E-7 |
| 63 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2785 | 2823 | 3.93E-10 |
| 60 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2830 | 2867 | 6.94E-9 |
| 58 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2879 | 2918 | 4.32E-8 |
| 57 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 2929 | 2965 | 1.17E-7 |
| 83 | g7075.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 3003 | 3035 | 4.62E-7 |
| 55 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 3062 | 3310 | 1.44E-46 |
| 76 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3387 | 3423 | 2.23E-6 |
| 70 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3484 | 3521 | 1.05E-5 |
| 71 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3525 | 3561 | 1.57E-9 |
| 80 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3560 | 3598 | 4.97E-9 |
| 77 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3611 | 3647 | 1.7E-9 |
| 68 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3647 | 3687 | 9.82E-9 |
| 79 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3690 | 3728 | 4.71E-6 |
| 67 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3728 | 3765 | 5.63E-7 |
| 65 | g7075.t1 | SUPERFAMILY | SSF57424 | LDL receptor-like module | 3765 | 3805 | 1.96E-9 |
| 49 | g7075.t1 | SUPERFAMILY | SSF63825 | YWTD domain | 3958 | 4131 | 5.1E-20 |
| 84 | g7075.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 4218 | 4253 | 2.45E-5 |
| 82 | g7075.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 4300 | 4339 | 1.52E-5 |
| 85 | g7075.t1 | SUPERFAMILY | SSF57196 | EGF/Laminin | 4340 | 4376 | 1.47E-6 |
| 87 | g7075.t1 | SignalP_EUK | SignalP-TM | SignalP-TM | 1 | 28 | - |
| 86 | g7075.t1 | SignalP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | 1 | 28 | - |
| 166 | g7075.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 7 | 29 | - |
| 167 | g7075.t1 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 4518 | 4540 | - |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0005515 | protein binding | MF |
| GO:0005509 | calcium ion binding | MF |
KEGG
Orthology
- This transcript has been annotated with K04550 (low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor))
Pathway
- This transcript belongs to the following pathways
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
