General information for g7444.t1
Yuki Yoshida
22/1/2022
Gene loci information
Transcript annotation
- This transcript has been annotated as Titin.
Parent gene
- The parent gene g7444 is located on chr_2: 23722857..23729517 (- strand)
Gene structure
- The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.
| Chromosome | Gene | Transcript | Category | ID | Start | End |
|---|---|---|---|---|---|---|
| chr_2 | g7444 | g7444.t1 | isoform | g7444.t1 | 23722857 | 23729517 |
| chr_2 | g7444 | g7444.t1 | exon | g7444.t1.exon1 | 23722857 | 23723047 |
| chr_2 | g7444 | g7444.t1 | cds | g7444.t1.CDS1 | 23722857 | 23723047 |
| chr_2 | g7444 | g7444.t1 | exon | g7444.t1.exon2 | 23723112 | 23723417 |
| chr_2 | g7444 | g7444.t1 | cds | g7444.t1.CDS2 | 23723112 | 23723417 |
| chr_2 | g7444 | g7444.t1 | exon | g7444.t1.exon3 | 23723510 | 23723809 |
| chr_2 | g7444 | g7444.t1 | cds | g7444.t1.CDS3 | 23723510 | 23723809 |
| chr_2 | g7444 | g7444.t1 | exon | g7444.t1.exon4 | 23723935 | 23728017 |
| chr_2 | g7444 | g7444.t1 | cds | g7444.t1.CDS4 | 23723935 | 23728017 |
| chr_2 | g7444 | g7444.t1 | exon | g7444.t1.exon5 | 23728072 | 23728350 |
| chr_2 | g7444 | g7444.t1 | cds | g7444.t1.CDS5 | 23728072 | 23728350 |
| chr_2 | g7444 | g7444.t1 | exon | g7444.t1.exon6 | 23728578 | 23729517 |
| chr_2 | g7444 | g7444.t1 | cds | g7444.t1.CDS6 | 23728578 | 23729517 |
| chr_2 | g7444 | g7444.t1 | TSS | g7444.t1 | NA | NA |
| chr_2 | g7444 | g7444.t1 | TTS | g7444.t1 | NA | NA |
Sequences
>g7444.t1 Gene=g7444 Length=6099
ATGTCTATCACAAAAACGATCGTAAAAGAACCAGAGGAAGAACATGTTGAAGAGGTTATA
ATCGGTATTAAAAAACCAAAATCAAAAACTTTCGTAACAGAAGATATTGAAGTTGAAGAG
ACAATAATGAAGAAAAGAAAACCACGTGAGCCTACTAGTGAAGAAGTTGAAGCAGAAATG
GTTTCTATCAAAAAACCAAAGAAACCAAAAATTCATATGGAAGAAGCTGAAGCAAGTTTT
ACTAAAACAATTGAAGTTCCAACTGAGGAAGAACCAATTGTTGAAGAAATTTACGAGGAA
GAGCAACCCGAAGAATTTGTCTTCAAACGTAAACCAAAACCGAAGCCACTTCAATTTGAA
GAGCATGAAGAAGAAATCACAATCAAAAAACTTAAAAAGCCTCGTAAACGACCTGAATTT
CCTGAATACTCTGAACCTGAAAATGTTACATTTAGACCAAAACGTACAACAACAAAAGAA
GATGTCGACCAAGAGTTCAAGATTCAGCTCGATTCCTATCAAGAAGAGGAAATTTCAATG
TCTGGTAAGGTTAAATTAAAGAAGCCTAAACCAGTATATTTCGAGGACTCAAGTGAGCAC
AACATCAGAATTATTCAAGAGGTCGAGGATGAAGGTCCGATTATTGAAGAAATTATTGAT
GAAGGTAGTGAACCAGAGGATACAATGTACGATGTTGACGAGCCAGATGAGTTCTCTGAT
AAAGAGGTAATGCCTGAGCAAGAAGACGATGTACCTGAAGATGTTTATATCAAATTACGA
AGACGTAAGCACAGGCCACCATATAAAGTACATGAACATGAAGAAGAATCTGTTTCATTG
GGTTTGCCACGTAAGAAGCGTACAAAAGTCTCATCATATGATGAAGACTCATTGCAATTG
CGTTTAAAACGTCGCTCGTCTGGTAGAAAATATGCTGAAGAAGAGAACTCGCTCAGCATC
ACAAGAGAATTGCGTGAGGAAGATTTGATGGTTTCAATATGCCAAGTAGTATCAGATAAT
GAAGACACATTGAACCTAGTTGAGGGTGAAAAAGTCTATGTTATTGATCGTTATAATGCT
GATTGGTGGTTTATTAGAAAACATTTAACAAACGAAAAAGGCTGGACTGAGTCCCACAAC
CTAATGGATGTTGTCAGTTATACTCATTATGTACAAAAGAAACTTAATGAAAAGATTGAT
AAACTTCCTGTTATTGAAAAACCTGGACCAGGATCTTTCGCACCAAGATTTGTTGAGAAA
CTTCAACCAATCAATACACCTGAGGGTTATACTATTCAATTTGAGTGTAAAGTTGAAGGT
TCACCACGACCACAGATCACTTGGTTCAGACAAACTCAAATTATTATGGCATCAGTTGAC
TTCCAAATGTATTACGATGACGATGATGTTGCAACTTTGATTATTCGAGAAGTGTTCCCA
GAAGATGCTGGAACTATTACTTGTGTTGCCAAAAATGCAGCTGGTTTTGCATCAAATACA
ACAGAGTTAACAGTGGAAGCAACTTCAGACCATGGCTCAGAAGTGGCATCAAGACGTAGC
ATGTCAAGAGAATCTTCATTAGCAGACATCCTCGATGGTGTTCCGCCAATTTTCTCAAAG
AAACCTAAATGTAAATGTGTTGATGAAGGTACAAACGTTATCATTGATTGTCGCTTAGTT
GCTGTTCCAAAACCAACAATTAAATGGTATTTTGAAGGAAAAGAAATTGATACAAGAGAC
AATATTAAAATTGTTACTAAATCAGAAAATCACATGTACTGTACAGTTATGCAAATTACT
AAAGTTGCAAAAGCACAAGAAGGCAGATATAGAGTTATTGCTGACAATGGTGTTGGTGAG
ACTCAACTTCCTATCAAACTTAAAGTAAGGACTGGTGAGAAAGAAAAACCAGAAATTCTT
GAACCATTGAAAAATTCAGTCATTCGTGAAGGAGAATCTATTACATTTAGCACTCAAGTC
ATTGGAAATCCTCAACCAAAAGTTCAGTGGTTCAAAGATGGTGTTGAAATTAAAGAAAAC
ATTAAAGTAGATAAGGATGTCTACTCTATTACAATTGTTACAGCAACTGATAAAGATAGT
GGTGAATATACAATCAAAGCAACAAATCCGTTGGGAACTGCTTTTGATGGAGCATCATTA
ACTGTTGAGGACAGTGGTGTTCACTTTGAACCACCAATGTTTCTCACACGATTTGAAGAA
CAAACAGTAAAACAAAATGAAACAATTACATTAACTGCCAAAGTCACTGGCATTCCTCGT
CCTGATGTAACTTGGTTAAGGAATAACAAACCATTGCAGCCAAGTGACAGAATGTCAACA
GAATATATTGGTGAAACAACAACTCTTAAAATAACAAAAGCTGATTCTGAAACTGACTCT
GGTGACTACAAATGCATTGCAAGTAACATCATTGGTAAAGCATCACATGGTGCAAAAGTA
CATATTGATGTTGACAAAGTGACATTTACGAAACCATTACATAAGACTTATACGGTTGAG
GAAAATAAAACAACAACCTTGGAATGTGAAACTTCTCATTCAGTTCCAACAAAGTGGTAC
CATAATGATAAAGAACTTACTGGAATGGATCATCGTGTTATTTCACATGAAGCACGTATT
CATAAACTCATTATCAAATCATCATCTTATGATGATGCAGGTTTTTATAAATGTGTTGTT
AAAAAGCAAGTCACAGATACAGAATTGAAAGTAACTGAAGCTAAACCAGAATTTGTGAGA
AAGCTTGAAGATATAGAATCTAATGAACTTGAAACTGTGACTTTAGAAGTTGAAATTACT
TCAGAAACAGCCACAGTTGCATGGTATAAAGATGGTGAAGAAATTAAGCCAAAACCAAAC
AAATTTGAGATGATCAAAAATGGAAAAATTCATCAATTAGTTGTCAAAGAAGTCACTGTT
TACGATGAAGGTGAATACACTTGTGTATTAGCTGACCAAGAATGCTCAGGTGATGTCACA
GTTATTGAATTACCACCAAAACTTCTTTATGAATTGGAAAATATTACAATTTCACAAGGA
GAAAAGGCCATTTTTGAAGTTGAATTAACTAAGGGTGATGCACTTGTGAAATGGTTCAAA
AATGGTGAAGAAATTCAATTTTCTGATCATGTCCAATTGAGAATTGATGGCAAGAAACAA
AAGTTGAAAATTTATGACGCATTACTTGAAGATGCTGGTGAATATTCATGTATGGTTGCA
GATGAAATTTCATCAGCAACACTTACTGTTGAAAAACCATTGGTTGAATTTGTGAAAAGA
TTGCCTGATATAACACTCGTGACAAAGGGCAATGAAATCACGTTTACAGTTGAACTTTCA
CAACCTGATGTTGTTGTTGAATGGTTCAAGAATAATGAACCAATAAAACCATCTGATAAA
TTTACAATTATCGACGAAGGCCCAATTAAGAAACTTATTTTACACAACGCAGAAGAAAAT
GATGCAAATCAATATACTGTTGTGGCAGAAAATGTCAAATCAACTACTAAATTAAAGGTT
GAAATTATTAAATCAGCACCAGTAATTGCACTTGAAGATTTGAATAAAACTTATAAAGTT
AAGAAAGACGATGAAGTAACATTTACAGTGAAATTTACAGCAACACCAAAACCAGATTGT
GAATGGACAGTTTCAGAGAAAATTATCAAGAAATCAGATCGTTACGAGCCAAAAGTTAAT
GATCAATCAGCAAGCTTGACAATTAAGAAAATTGTTGAGAACGATGCTGGTGAATATACA
GTAAAGTTGAGAAATGTCGTTGGTGAAGTTGAAACTTCACTTAAAGTCATTTACATGAAA
CAACCATCACAACCAAGCTCACCAGAGCCAGTAGAATTGACTGATGATTCAATCACACTA
TTTTGGCATCCACCAAGTGATGACGGCAATTGTGAAATCACAGAATATATTTTGGAATAT
CAAGAAAGTAAAGAAAAAACATGGAAGAAAATTACAAAGATTACAGACACAACAAATAAA
CTTACACAACTCAAAAAAGATACAGAAATGAGATTCCAAGTGACAGCAATCAATGAAATC
GGACCAAGCAATCCATCAGAGCCATCAAGTGCTAAAATCTCAAAACCAATTAAGAAAGAA
CCTCCAATATTCACAGAAACACTTAAAGATGTTATAATAGGACTCAACAAATCGCTTACA
CTTTCATGTGTTGTCGGTGGTGTTCCTATTCCAGAAGTAATGTGGTTCAAAGATGATCAA
CCATTTGCATCAAAATTCATTTCATATGAAAGTAGAAATGCAAAATATATAATTGAAAAT
ACTACAGAAAAGACTGCTGGCATTTATAAATGTATTGCAACTAATGAAATGGGAGAAGCA
ACGACAGAAAACAAAGTAATAATTCAAGAAAAACCAACAATAACAATTGATGAAAAATTA
CTCTCGCAGAATCTTCGTGTACAATCGCAATATGAAGTGACAGCCACAATCACTGGCTAT
CCAAATCCAAAAGTTCAATGGTATAAAGATAATATTAAGATTGATACAAATGAAGAATTT
ACAATAGAAACAACAAAAACAACTTCAAAACTTTTCATAAAAAGTATCGAACGACATCAT
AGTGGCAAATTTACAGTAAAAGCCAAAAACACAGCTGGTGCAGCAGTTGTCGATTTATCT
GTAACAGTAATTGACAAACCAAGCAAACCAGAAGGTCCATTATTATTCCGTGAAATCAGT
GACGAAGCTGTTGTGTTGGAATGGCAAGCACCAAGTGATGATGGTGGTCTTGACATTCAA
CAATACTCAATTGAAAAATGTGATCCAAATCAGAAGGCATGGATTAAAATTGCCACAGTT
GATAGTAACATCGAGTCTTATTGCATACAGAATCTCACAGAAAATGCCCAGTATTTATTC
CGTGTTATTGCTAGAAATCCAATTGGTAGCTCTGAGCCACTTGAAAGTGAACCTGTAACA
GTTAAAAGGGTAGCAGAGCCACCATCACCACCACGTGGTCCAATAGAGATCTCCGGAATG
ACAGATACCTCATTTACACTTACATGGAAACCATCCGAAAAAGACGGTGGCTCAAGACTT
ATCGAATATATTGTTGAAATTCGTGAAAGTAATAAAAAAGTGTGGAGAATGCTGAGCATC
ACATCGTTTGACCAAACTAGTATATTTGTACAAAAACTTGTTAAGGATCAAGGCTATCAT
TTCAGAATTACAGCACGCAATAAGATTGGTATAAGTGATCCATTAATTACAGATGATAAA
ATTGTTTCTGGTCGTCAAATAACTCCACCATCACCACCACAAAACTTACAAATCATTACG
GTTACAAGCAAGAGCGTAACAATTCAATGGGAAACACCAGATAGCAACGGTGGAACTGAA
ATTACTAGTTACATCATTGAAAAATTGCTGTCAAAATCATCACAATGGAGTCGTGTTGCA
ACACTTGATTCTTACTGCCTAAGCTATTGTATTGATAACTTGAAGGATACTAATGAACTT
AACTTTAGAGTATCAGCTGAAAATGCCATTGGTGTTAGTGCACCATCATACACTGAATCT
GTCACACTCAAAACACATGCAACTGCTCCATCGCCGCCAACAGGACCACTTGAAATTAGA
CTTATTGGTTCAAGTACACATGTTGCAGAATGGGGCGTGCCTGAAAGTGATGGAGGTGCA
CCTCTTTTGGGCTATAATGTGGCAATTCGTGACGTTAAGAAGACAATGTGGATTGAAGTT
GGTCGCTGTAAAGAAGATGTACAGAAGTTTAATATTCGCGATCTTCAAGAAGGCCATAAA
TATCTCATTCGAATTTATGCACGCAATGAAATTGGCATGAGTGATCCATTAGAATCGGAA
GAACCATATGAAGTTCTTCATGGAACTGGACATGATCCACATGATGAACCAAGATCGATG
ATGACTGAACCTACAGGATGGAGTACAGAAAATACTTCATCATGGATGCGCGAACATAAT
ATGGATGCTGATATAAGTTCATATGCACGCGCAAAATTAAGACGAAGAGACGAATACTTC
TTTAAAATTTGGCATTATGCAAAGAAGTTGTTTAAATAA
>g7444.t1 Gene=g7444 Length=2032
MSITKTIVKEPEEEHVEEVIIGIKKPKSKTFVTEDIEVEETIMKKRKPREPTSEEVEAEM
VSIKKPKKPKIHMEEAEASFTKTIEVPTEEEPIVEEIYEEEQPEEFVFKRKPKPKPLQFE
EHEEEITIKKLKKPRKRPEFPEYSEPENVTFRPKRTTTKEDVDQEFKIQLDSYQEEEISM
SGKVKLKKPKPVYFEDSSEHNIRIIQEVEDEGPIIEEIIDEGSEPEDTMYDVDEPDEFSD
KEVMPEQEDDVPEDVYIKLRRRKHRPPYKVHEHEEESVSLGLPRKKRTKVSSYDEDSLQL
RLKRRSSGRKYAEEENSLSITRELREEDLMVSICQVVSDNEDTLNLVEGEKVYVIDRYNA
DWWFIRKHLTNEKGWTESHNLMDVVSYTHYVQKKLNEKIDKLPVIEKPGPGSFAPRFVEK
LQPINTPEGYTIQFECKVEGSPRPQITWFRQTQIIMASVDFQMYYDDDDVATLIIREVFP
EDAGTITCVAKNAAGFASNTTELTVEATSDHGSEVASRRSMSRESSLADILDGVPPIFSK
KPKCKCVDEGTNVIIDCRLVAVPKPTIKWYFEGKEIDTRDNIKIVTKSENHMYCTVMQIT
KVAKAQEGRYRVIADNGVGETQLPIKLKVRTGEKEKPEILEPLKNSVIREGESITFSTQV
IGNPQPKVQWFKDGVEIKENIKVDKDVYSITIVTATDKDSGEYTIKATNPLGTAFDGASL
TVEDSGVHFEPPMFLTRFEEQTVKQNETITLTAKVTGIPRPDVTWLRNNKPLQPSDRMST
EYIGETTTLKITKADSETDSGDYKCIASNIIGKASHGAKVHIDVDKVTFTKPLHKTYTVE
ENKTTTLECETSHSVPTKWYHNDKELTGMDHRVISHEARIHKLIIKSSSYDDAGFYKCVV
KKQVTDTELKVTEAKPEFVRKLEDIESNELETVTLEVEITSETATVAWYKDGEEIKPKPN
KFEMIKNGKIHQLVVKEVTVYDEGEYTCVLADQECSGDVTVIELPPKLLYELENITISQG
EKAIFEVELTKGDALVKWFKNGEEIQFSDHVQLRIDGKKQKLKIYDALLEDAGEYSCMVA
DEISSATLTVEKPLVEFVKRLPDITLVTKGNEITFTVELSQPDVVVEWFKNNEPIKPSDK
FTIIDEGPIKKLILHNAEENDANQYTVVAENVKSTTKLKVEIIKSAPVIALEDLNKTYKV
KKDDEVTFTVKFTATPKPDCEWTVSEKIIKKSDRYEPKVNDQSASLTIKKIVENDAGEYT
VKLRNVVGEVETSLKVIYMKQPSQPSSPEPVELTDDSITLFWHPPSDDGNCEITEYILEY
QESKEKTWKKITKITDTTNKLTQLKKDTEMRFQVTAINEIGPSNPSEPSSAKISKPIKKE
PPIFTETLKDVIIGLNKSLTLSCVVGGVPIPEVMWFKDDQPFASKFISYESRNAKYIIEN
TTEKTAGIYKCIATNEMGEATTENKVIIQEKPTITIDEKLLSQNLRVQSQYEVTATITGY
PNPKVQWYKDNIKIDTNEEFTIETTKTTSKLFIKSIERHHSGKFTVKAKNTAGAAVVDLS
VTVIDKPSKPEGPLLFREISDEAVVLEWQAPSDDGGLDIQQYSIEKCDPNQKAWIKIATV
DSNIESYCIQNLTENAQYLFRVIARNPIGSSEPLESEPVTVKRVAEPPSPPRGPIEISGM
TDTSFTLTWKPSEKDGGSRLIEYIVEIRESNKKVWRMLSITSFDQTSIFVQKLVKDQGYH
FRITARNKIGISDPLITDDKIVSGRQITPPSPPQNLQIITVTSKSVTIQWETPDSNGGTE
ITSYIIEKLLSKSSQWSRVATLDSYCLSYCIDNLKDTNELNFRVSAENAIGVSAPSYTES
VTLKTHATAPSPPTGPLEIRLIGSSTHVAEWGVPESDGGAPLLGYNVAIRDVKKTMWIEV
GRCKEDVQKFNIRDLQEGHKYLIRIYARNEIGMSDPLESEEPYEVLHGTGHDPHDEPRSM
MTEPTGWSTENTSSWMREHNMDADISSYARAKLRRRDEYFFKIWHYAKKLFK
Protein features from InterProScan
| Transcript | Database | ID | Name | Start | End | E.value | |
|---|---|---|---|---|---|---|---|
| 50 | g7444.t1 | CDD | cd00096 | Ig | 432 | 502 | 1.05424E-16 |
| 58 | g7444.t1 | CDD | cd00096 | Ig | 553 | 622 | 3.51235E-8 |
| 55 | g7444.t1 | CDD | cd00096 | Ig | 659 | 714 | 4.21491E-10 |
| 53 | g7444.t1 | CDD | cd00096 | Ig | 749 | 819 | 1.60175E-15 |
| 56 | g7444.t1 | CDD | cd00096 | Ig | 846 | 912 | 1.37027E-7 |
| 57 | g7444.t1 | CDD | cd00096 | Ig | 933 | 989 | 3.0005E-7 |
| 51 | g7444.t1 | CDD | cd00096 | Ig | 1122 | 1181 | 2.28059E-7 |
| 54 | g7444.t1 | CDD | cd00096 | Ig | 1206 | 1273 | 3.63986E-10 |
| 60 | g7444.t1 | CDD | cd00063 | FN3 | 1282 | 1372 | 3.30103E-17 |
| 52 | g7444.t1 | CDD | cd00096 | Ig | 1399 | 1463 | 3.33322E-10 |
| 62 | g7444.t1 | CDD | cd00063 | FN3 | 1567 | 1661 | 3.28474E-16 |
| 63 | g7444.t1 | CDD | cd00063 | FN3 | 1668 | 1754 | 2.07854E-16 |
| 61 | g7444.t1 | CDD | cd00063 | FN3 | 1770 | 1862 | 7.58886E-16 |
| 59 | g7444.t1 | CDD | cd00063 | FN3 | 1870 | 1961 | 6.82934E-14 |
| 49 | g7444.t1 | Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 324 | 379 | 2.3E-5 |
| 47 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 412 | 507 | 1.0E-24 |
| 39 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 532 | 633 | 9.0E-18 |
| 33 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 634 | 727 | 1.3E-21 |
| 38 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 728 | 826 | 1.6E-23 |
| 46 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 827 | 914 | 4.0E-18 |
| 41 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 915 | 1004 | 3.5E-22 |
| 40 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1005 | 1092 | 2.5E-22 |
| 35 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1093 | 1182 | 1.2E-21 |
| 48 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1187 | 1275 | 4.9E-16 |
| 37 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1276 | 1372 | 1.2E-25 |
| 36 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1373 | 1475 | 4.8E-19 |
| 42 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1476 | 1570 | 3.4E-19 |
| 43 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1571 | 1666 | 4.7E-22 |
| 45 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1667 | 1764 | 4.1E-21 |
| 34 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1770 | 1866 | 1.3E-23 |
| 44 | g7444.t1 | Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 1867 | 1967 | 2.0E-17 |
| 93 | g7444.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 72 | - |
| 94 | g7444.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 163 | - |
| 92 | g7444.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 293 | - |
| 91 | g7444.t1 | MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 293 | - |
| 17 | g7444.t1 | PANTHER | PTHR19890 | FIBROBLAST GROWTH FACTOR RECEPTOR | 10 | 2032 | 0.0 |
| 2 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 415 | 505 | 7.0E-20 |
| 10 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 536 | 629 | 9.4E-12 |
| 8 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 637 | 722 | 4.4E-20 |
| 1 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 732 | 822 | 2.3E-18 |
| 5 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 828 | 910 | 1.8E-8 |
| 4 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 916 | 991 | 2.6E-11 |
| 7 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 1007 | 1090 | 6.6E-12 |
| 3 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 1103 | 1180 | 1.1E-10 |
| 9 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 1196 | 1276 | 4.2E-15 |
| 14 | g7444.t1 | Pfam | PF00041 | Fibronectin type III domain | 1283 | 1366 | 3.1E-10 |
| 11 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 1382 | 1467 | 1.6E-14 |
| 6 | g7444.t1 | Pfam | PF07679 | Immunoglobulin I-set domain | 1476 | 1563 | 5.9E-15 |
| 12 | g7444.t1 | Pfam | PF00041 | Fibronectin type III domain | 1572 | 1652 | 2.4E-10 |
| 15 | g7444.t1 | Pfam | PF00041 | Fibronectin type III domain | 1670 | 1752 | 7.3E-11 |
| 13 | g7444.t1 | Pfam | PF00041 | Fibronectin type III domain | 1771 | 1856 | 1.8E-10 |
| 16 | g7444.t1 | Pfam | PF00041 | Fibronectin type III domain | 1872 | 1953 | 3.4E-8 |
| 95 | g7444.t1 | ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 325 | 386 | 13.234 |
| 107 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 415 | 504 | 13.511 |
| 111 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 536 | 628 | 8.284 |
| 106 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 637 | 721 | 10.462 |
| 103 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 731 | 825 | 12.132 |
| 108 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 832 | 912 | 7.921 |
| 109 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 916 | 1000 | 10.408 |
| 110 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 1006 | 1089 | 10.335 |
| 101 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 1093 | 1183 | 7.667 |
| 105 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 1187 | 1277 | 6.56 |
| 100 | g7444.t1 | ProSiteProfiles | PS50853 | Fibronectin type-III domain profile. | 1284 | 1377 | 22.462 |
| 104 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 1382 | 1467 | 11.824 |
| 102 | g7444.t1 | ProSiteProfiles | PS50835 | Ig-like domain profile. | 1472 | 1562 | 8.212 |
| 99 | g7444.t1 | ProSiteProfiles | PS50853 | Fibronectin type-III domain profile. | 1569 | 1664 | 19.116 |
| 96 | g7444.t1 | ProSiteProfiles | PS50853 | Fibronectin type-III domain profile. | 1670 | 1771 | 19.345 |
| 97 | g7444.t1 | ProSiteProfiles | PS50853 | Fibronectin type-III domain profile. | 1772 | 1868 | 20.821 |
| 98 | g7444.t1 | ProSiteProfiles | PS50853 | Fibronectin type-III domain profile. | 1872 | 1968 | 16.892 |
| 74 | g7444.t1 | SMART | SM00409 | IG_3c | 421 | 506 | 5.7E-10 |
| 87 | g7444.t1 | SMART | SM00408 | igc2_5 | 427 | 495 | 8.3E-11 |
| 69 | g7444.t1 | SMART | SM00409 | IG_3c | 542 | 630 | 0.003 |
| 84 | g7444.t1 | SMART | SM00408 | igc2_5 | 548 | 619 | 3.7E-5 |
| 67 | g7444.t1 | SMART | SM00409 | IG_3c | 643 | 723 | 1.8E-6 |
| 81 | g7444.t1 | SMART | SM00408 | igc2_5 | 649 | 712 | 0.0029 |
| 68 | g7444.t1 | SMART | SM00409 | IG_3c | 738 | 823 | 7.0E-5 |
| 80 | g7444.t1 | SMART | SM00408 | igc2_5 | 744 | 812 | 1.9E-8 |
| 65 | g7444.t1 | SMART | SM00409 | IG_3c | 834 | 912 | 3.3E-6 |
| 90 | g7444.t1 | SMART | SM00408 | igc2_5 | 840 | 905 | 0.018 |
| 70 | g7444.t1 | SMART | SM00409 | IG_3c | 922 | 1002 | 1.8E-4 |
| 85 | g7444.t1 | SMART | SM00408 | igc2_5 | 928 | 995 | 0.055 |
| 71 | g7444.t1 | SMART | SM00409 | IG_3c | 1012 | 1091 | 7.9E-7 |
| 89 | g7444.t1 | SMART | SM00408 | igc2_5 | 1018 | 1084 | 0.0014 |
| 72 | g7444.t1 | SMART | SM00409 | IG_3c | 1102 | 1181 | 1.1E-5 |
| 88 | g7444.t1 | SMART | SM00408 | igc2_5 | 1108 | 1174 | 1.4 |
| 64 | g7444.t1 | SMART | SM00409 | IG_3c | 1195 | 1277 | 0.001 |
| 86 | g7444.t1 | SMART | SM00408 | igc2_5 | 1201 | 1268 | 0.21 |
| 79 | g7444.t1 | SMART | SM00060 | FN3_2 | 1282 | 1363 | 1.0E-8 |
| 73 | g7444.t1 | SMART | SM00409 | IG_3c | 1388 | 1469 | 2.0E-4 |
| 82 | g7444.t1 | SMART | SM00408 | igc2_5 | 1394 | 1458 | 1.6E-8 |
| 66 | g7444.t1 | SMART | SM00409 | IG_3c | 1482 | 1564 | 4.0 |
| 83 | g7444.t1 | SMART | SM00408 | igc2_5 | 1486 | 1553 | 0.24 |
| 75 | g7444.t1 | SMART | SM00060 | FN3_2 | 1567 | 1651 | 1.6E-11 |
| 78 | g7444.t1 | SMART | SM00060 | FN3_2 | 1668 | 1752 | 3.4E-12 |
| 77 | g7444.t1 | SMART | SM00060 | FN3_2 | 1770 | 1853 | 1.3E-11 |
| 76 | g7444.t1 | SMART | SM00060 | FN3_2 | 1870 | 1954 | 3.5E-9 |
| 32 | g7444.t1 | SUPERFAMILY | SSF50044 | SH3-domain | 338 | 375 | 4.2E-7 |
| 30 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 415 | 507 | 1.21E-22 |
| 23 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 534 | 630 | 1.65E-16 |
| 28 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 637 | 731 | 1.76E-20 |
| 21 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 729 | 822 | 3.93E-21 |
| 29 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 829 | 913 | 1.64E-13 |
| 22 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 913 | 995 | 2.33E-17 |
| 25 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 1002 | 1090 | 4.74E-18 |
| 31 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 1087 | 1180 | 1.23E-15 |
| 26 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 1196 | 1288 | 2.69E-16 |
| 19 | g7444.t1 | SUPERFAMILY | SSF49265 | Fibronectin type III | 1274 | 1377 | 5.78E-23 |
| 24 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 1382 | 1475 | 2.29E-18 |
| 27 | g7444.t1 | SUPERFAMILY | SSF48726 | Immunoglobulin | 1479 | 1573 | 1.15E-17 |
| 20 | g7444.t1 | SUPERFAMILY | SSF49265 | Fibronectin type III | 1565 | 1754 | 1.65E-36 |
| 18 | g7444.t1 | SUPERFAMILY | SSF49265 | Fibronectin type III | 1768 | 1958 | 2.99E-35 |
Transmembrane regions from TMHMM
Disordered region
IUPRED3 score over 0.5 is predictive of a disordered region.
GO terms from InterProScan
| GOID | TERM | ONTOLOGY |
|---|---|---|
| GO:0005515 | protein binding | MF |
KEGG
Orthology
This gene did not have any KEGG ortholog annotations (KAAS, GHOSTZ).
Expression
Transcript expression in Pv11 cells
TPM values are indicated as average +/- STDEV. 
Differential expression
Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.
