Gene loci information

Transcript annotation

  • This transcript has been annotated as Fatty acid synthase.

Parent gene

Gene structure

  • The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.

Chromosome Gene Transcript Category ID Start End
chr_2 g7861 g7861.t1 isoform g7861.t1 26498526 26506196
chr_2 g7861 g7861.t1 exon g7861.t1.exon1 26498526 26499181
chr_2 g7861 g7861.t1 cds g7861.t1.CDS1 26498526 26499181
chr_2 g7861 g7861.t1 exon g7861.t1.exon2 26499240 26499528
chr_2 g7861 g7861.t1 cds g7861.t1.CDS2 26499240 26499528
chr_2 g7861 g7861.t1 exon g7861.t1.exon3 26499596 26499615
chr_2 g7861 g7861.t1 cds g7861.t1.CDS3 26499596 26499615
chr_2 g7861 g7861.t1 exon g7861.t1.exon4 26499702 26499967
chr_2 g7861 g7861.t1 cds g7861.t1.CDS4 26499702 26499967
chr_2 g7861 g7861.t1 exon g7861.t1.exon5 26500030 26500381
chr_2 g7861 g7861.t1 cds g7861.t1.CDS5 26500030 26500381
chr_2 g7861 g7861.t1 exon g7861.t1.exon6 26500442 26503907
chr_2 g7861 g7861.t1 cds g7861.t1.CDS6 26500442 26503907
chr_2 g7861 g7861.t1 exon g7861.t1.exon7 26503964 26504313
chr_2 g7861 g7861.t1 cds g7861.t1.CDS7 26503964 26504313
chr_2 g7861 g7861.t1 exon g7861.t1.exon8 26504403 26505343
chr_2 g7861 g7861.t1 cds g7861.t1.CDS8 26504403 26505343
chr_2 g7861 g7861.t1 exon g7861.t1.exon9 26505402 26505523
chr_2 g7861 g7861.t1 cds g7861.t1.CDS9 26505402 26505523
chr_2 g7861 g7861.t1 exon g7861.t1.exon10 26505585 26506196
chr_2 g7861 g7861.t1 cds g7861.t1.CDS10 26505585 26506196
chr_2 g7861 g7861.t1 TSS g7861.t1 NA NA
chr_2 g7861 g7861.t1 TTS g7861.t1 NA NA

Sequences

>g7861.t1 Gene=g7861 Length=7074
ATGTCTTCAAGAGACCGTAGAATTCAAACTCGCGTTAAACTTTCAGATCCTGGTGATGAA
ATTGTCATTTCTGGAATTGCTGGACGTTTTCCTAACTCTGCAAATATTGATGAGTTTTCT
TATAATCTCTACAATAAAATTGACATGGTCGATGATGATGAAAGACGCTGGAAGCACTTA
AATGAAGAAATTCCCAAACGATATGGCAAGACTGTCAATTTGGAAAAATTTGATGCACAA
TTTTTCTCTATCCATTATCGTCAAGCTCACAATATGGATCCTCAGGCAAGAATTCTTCAA
GAGCATGCATATGAAGCGATTATCGATGCAGGAGTTGCTCCGAAATCATTGAGAGGAAGT
AGAACGGGTGTTTTTATTGGTTGTTGTATGGCTGAAGCTGATGAACATTTTTTCTATGGC
CGTGGTCTAAAGGATGGCTTAGGTTTAACGGGAACAAGTCGTGCATTGTTGGCAAACAGA
ATTTCTTTTTCTATGGACCTTAAAGGGCCGTCGTGTACAATCGACACTGCATGTAGTAGT
TCAGGCTATGCTTTAGATTTGGCTTTTAATGCTTTAAGAAATGGTGAATGTGACGCTGCT
ATTGTTGGTGGTACTAATTTACTACTTCATCCTGCAACAACTTTACAATTCTTTAGATTG
GGAGTGTTGAGTAAGGATGGGTATTGCAGGCCATTCGATAAAGACGCTTCAGGCTATTGT
AGAAGTGAAGCAATTAATGTTCTTTTTCTTCAAAAGAAGAGAGATGCAAAACGCATTTAT
GCTGAATTACTTTACTCAAAAACTAACGTTGATGGCTTTAAAAATGAAGGTCTTACTTAT
CCAAGTGGTAAAATTCAAATTCAGCTTTTGGAAGAGTTCTACAAGGACATCGATATTGAT
CCAAAAACAATTGATTATGTTGAATCGCACAGTACAGGCACAAAGGTTGGCGATCCTGAA
GAATGCTTCACACTTGACACAATTTTTTGTACAGGAAGAGAAAAGGCATTGCCTGTTGGT
TCAGTAAAATCAAATATGGGACATAGCGAGGCATCATCATCAATTTCCTCTATTATCAAG
TCATTGTTTATTTTTGAAAATAAAAAAATTCCACCAAATATTCATTTCAAAACACCAAGA
CCTGGAATTCCATCGTTGGAGGCAGAAAGATTGAAAGTTGTTAATGAAATTCAAGATTTT
GATGGCACGCTCATTAGTGTTAATTCATTTGGCTTTGGCGGCGCTAATGCTCATGCTTTG
TTGAGGAAAAATATGAAGGAGAAAATCAACCGTGGCATTCCACAAGATAAACTACCACGT
TTATTATTATGGAGTGGAAGAACGGAAGAAGCTGTCAATGTTATCTTTGAAAGTATCTTG
ACACAACCACTAGACGCTGAGTACATTGCACTACTACAAAATGTTCAAACCGCAACACCA
TCATCAAACACATATCGCGGCTATGGGTTGTTTGTTCAATCGATTGAAAGTGAAAATGCT
ACATGCATTGCACGTCATATTGATAATTTTGCTTCATCTAAACGACCTATTGTTTTCGTA
TATAGTGGAATGGGCTCGCAATGGTGCGAGATGGGAGCAGATTTAATGAATATTCCAATT
TTTGCTGCGGCAATCAATAAATGTCACGACATCCTGGCCGAGAAGCAGCTGGATTTGAAA
AACATCATAACATCCACCGATTCGAAAATGTTTGACAATATTCTGCACTCGTTTGTGGGC
ATTGCAGCAATTCAAATAGGCTTAACGGATATATTGCGAGCTATAGGATTGGTGCCAGAT
TATATAATTGGACATTCGGTTGGCGAATTGGGTTGTGCATATGCTGACGGCTGTATTACT
GATGAGGAAATGATTTTGTCTGCATATTCGCGTGGTATGGCAAGCCTTGAAACCAAAGTT
GTTTATGGTTCAATGGCGGCGGTCGGTGTTGGCTATAAAGAACTTAAAAATATACTTGAT
GAAGGTGTGGAAATTGCTTGTCACAACAGTTCTGATTCATGTACTATTTCTGGTCCTGCT
GATTTAATCACTGCATTTGTGAATAAATTAAAGAAAGAAAATTATTTTGCAAAAGAAGTT
CAATGCTCACATATTCCCTATCACAGCTCGTATATCGCACAAATGGGATCAAAATTGCTT
TTACGATTGAAAGATGTCATCAAGTATCCAAAAGAGCGCTCTTCAAAATGGATTAGCTCG
AGTGTTCCAAAGAACTGCTGGGATACAATGGATTGCCGTTTCTCTTCAGCTCAATATCAT
ACAAATAATCTTCTCAGTCCAGTGCTTTTTGAAGAGGCATCAGAAAATCTTCCAAAAGAT
GCATTGACAATTGAAATTGCTCCACATGGACTCTTGCAAGCTATTCTTAAAAGAACTTTT
CCTGATGGCTTGCATATTGGCATTACACAGCGAGGGAATAAAGAGAATTCACTCTTTCTT
CTTAATTCTTTGGGAAAAATTTTCGAAAATGGCGTTGATATGGATATAAGCAAGCTTTAC
CCACCTATTGAATTCCCAGTATCATGTGGCACAAAAATGATATCATCTTTAATCAAGTGG
GATCATAGTGAAAATTGGTTTGTTCCAAAGCATGAAGACAAACAGCACAACGACATGAGA
ATAGTAATTAGCTTGCAAGATCCAGAATTTGAGTTCATTTCAGGACATGAGATTGATGGA
CGAGTTCTTTTTCCTGCTACTGGTTATCTCTTTCTCGCATGGAAACTTGCACTACAACAG
AATAAACAATTGTTTGCTGATTTCGACGTTGAATTTGAAGATGTGAAATTTTTACGTGCT
TGCAATATTCCAGCTGATTCAAGTGGAGTAGATTTGACAGTCGTTGTACAACGTGGAACC
GGAAGGTTTGAAGTAATTGAGGGAAAGACTGCAGTTGTTACGGGAATAGTAAGACCGGCA
GCAGACACAAAATTAACTCAAGTTGGCTTTACTCAAGATACATCGGATGAAAGTGCAGTT
GAATTGGAAACAAAAGATTTTTACAAAGAACTTCGACTGCGCGGTTATCATTACAAAAAT
TTGTTCAAATCAGTTGTTTCAGCACGAGCAGATGGATCAAGCGGAAGTATTAAATGGGAA
TCAAATTGGGTTGCATTTCTCGATTGTCTTTTACAACTTCAAATAATTTCTAAAGATACA
CGTTCACTTGCACTTCCGACTGGTATTAGAAAAATTTTGATTAAAACAAAAGACCATTTG
AAATTCATATCTGAGCTTGGTGACAATGAGCCATTGAAAGCCAACTATAATTCAGATTTA
AATATTTTACAATGCGGTGGTGTTGAAATAAGAGGATTACAAGCACAAGTTGTCGGCAGA
AGACCACCACCTGGCATTCCAGTACTCGAGAGTTATCAATTTATTCCACATTTTCCTACA
CCAGTGCTCTCGAAAAATGACATTGCACGCTTTTGTGTTCAACTTGCTATTGAAAATTTA
CAAATATCAAAAGTCACTTCTGTTGAAATTGACATGAGTGATGATAAAGAGCCATTGAGT
GAGCATTTTGGCAATGCATTGTGTGACCTTCCATTGGTTAGAGCTGAATTAAACTATTTA
TCTACACGAGAACTCAAAATTCCACATGTAAATGTGACTAACGAAGAATTTTCATCATTT
AGTAACAGCACATTTGTGATAAGATCAAATTGTCTTTCAAATAGCGAAATTATTGAGTCA
ATTGCATCACAATTGAGTGAGAGTGGCTTTATCTTATCGAGAGAAACAATTGATACTAAA
GTTATTCAAATTTATGGACTTTCACAGGGTTTTCAAATTGTCGCTGTGATTCAATCTATT
GATGAAACTTTTGTACTCATTCAATATAATAAAGTGCAACCAAAATTGCCATTGAATGTT
ATCAAAATCAATAACAATGACTCTCTGTGGCTGCCTAAATTGAAAGAAGTAGCTAAAACT
GAACCAACAATCGTCTATGTCGAAAATGAAGAGCTATCTGGTGTTATTGGTCTTGTGAAT
TGTATCAGAAAAGAGCCTGGTGGAAATAATGTTCGATGTTTTTACATTGATGATCAAAGT
GCACCGCCTTTTGATATTGAAAATTCATTCTATAAATATCAGCTTGAAAAAAATCTCGCT
ATTAATGTTTACCGTGATGGTGCATGGGGAAGCTACAAACACTTATCAATATGTCCAAGC
TATGTAAAAGCCCCACAGGAAACCGCTTGCTATGCGAATTCATTAACTCGTGGTGATTTA
TCTTCCATTAAATGGCAACAGAGTCCATTAATTGATTTAACAGGCAAAGACATTATTCGA
TTGCAATATGCATCGTTGAACTTTCGCGATGTAATGTTAGCAACGGGAAAATTGTCTGCT
GATGTAATCGGAGACAATCGACTTGATCTCATGTGCGTAATGGGCTTTGAATTCTCTGGT
ATAAAAAACGATGGCCGTAGAGTGATGGGAATGAGAATTTCCGGTACATTGGCAACTCAT
GCTCAAGCGGATGATGTTCTGCTTTGGGATGTTCCCGATAATTGGACATTGGAAGAAGCA
GCTACAGTTCCTTGTGTTTATGCGACAGTCTATGCAGCATTTTTTTTAACAACACAAATT
CAAAAGGGCAAATCAATTTTGATTCATGCCGGAAGTGGGGGAATTGGTCTCGCAGCGATA
CGCGTGGCATTAGCTTATGGATTAGAAGTCTTCACAACTGTCAGCACAGAGGAAAAGAAA
AATTTCCTCCTCGAACAATTTCCTCAATTAAAGCGAGAAAATATTGGCAATTCGCGTGAC
ACTTCGTTTGAGGACTTAGTGAAAAAAAGAACACATGGCAAAGGAGTAGATTACGTGCTT
AATTCATTAGCTGAAGAAAAATTGTTGGCATCAGTTAGGTGTTTATGTAAAGGTGGAAAA
TTTTTGGAAATTGGCAAATTTGATATGGCTAATGATAATAAACTTGGTTTGGGTGACTTC
TTAAAAGAGTTAACATTTCATGCAGTTTTGCTTGATAATTTTTTTAAAGCTACAAGAGAT
GAGAAATTGATACTCAAAGAACTTCTTGATAAGGATTTAAATCGAGGTATCATTAAACCC
CTCAAAACAAATGTTTTTAAAGCGGATGAAGTTGAGAAGGCGTTTAGATTACTGGCTAGC
GGCAAACATATTGGAAAGGTCATTTTACAAATTCGTGAGAATGAAAATGACAACGCAACA
GTTCCGATCTCAGTATTGCCAAGGGTTTATTGTAATCCATGCTTATCATATTTAATTTGT
GGTGGTCTAGGTGGTTTTGGTTTAGAGTTAGCTGATTGGTTGATACTAAGAGGATGTAAA
TATATAGTTTTAAGTTCAAGTAGAGGAATCACAAAAAACTATCAAAAAATGAGAATTAGA
ATTTGGGAATCATATGGTGTAAAAGTAATTATAAGCACATCTGACATAACAACAAGAGAT
GGTTGTAATAATTTAATTACGAATGCAATTCAACTTGCTCCTGTTGGTGGAATTTTCAAT
TTAGCAGTAAAATTGCGCGATGGAATACTCGAGAATCAAGATTCATTTACTTTTGATGAG
TGCATGGCACCAAAAGCTATCGCTACGAAGCATCTAGATGAAATCTCTCGCACAAGCTGT
CCTCTCTTACAGCATTTTGTTGTCTTTTCAAGTGTCTCTTGTGGTCGAGGAAATGCTGGC
CAAAGTAATTATGGTATGGCAAACTCTGTGATGGAGCGTATCATTGAACAACGTCACAAA
GTTGAATTACCTGCAAAGGCAATTCAGTGGGGAGCTGTTGGTGAAGTTGGAATCGTTGCA
GATATGCAAGAGGATAAACTAGATATGGAAATCGGTGGCACTCTACAACAGAGAATTTCA
TCATGTTTAGAAGAGCTTGACACACTGATGACAGTGAATGAGCCAATTGTTAGTAGCATG
GTAGTGGCTGAAAAGCGGTATACAAGCACTGGAAAAGGTGGAATCATTGAAATGATTATG
AATATCATGTCGATTAAAGATATCAAGAGTCTTTCACTTGAGACCAAACTCTCTGAACTT
GGCATGGATTCATTGATGACTGTAGAGATTTCTCAGGCACTTGAACGTGAATTCAATCTG
AATGTTACACCGCAAGAGTTAAGGTCAATGACATTACTTCAATTGAAAGCATTCGAGATT
AATGGAAATTTCAATGGTGAGATTGAAAAAAAGATGAATGGAATTGAATTTTTGTTAAGA
AATTTAGGCGAAGAATCAAATAGCAATCAACCAATAATCAAACTTGAAAGCGAAATGGAT
ACTGGATATACAAAACTTTTATTAATTCCTGGAATTGAAGGTACTGGCGGTAAAATGTAT
TATAATTTAGCACGAAAGTTGAAATATCCCACGTACTTGCTTCAAGTTGCTAGTTGCTGG
CATGCAAAGGATTTAAATGAAATGTACAATGCAATAATTGATGATGTGTTGAAACTTTAC
GAAAACGAGACAACTTTTTTGCTTGTTGGATATTCATTCGGTGCAATGTTAGCATTAAAA
TTGGCGAAAACTTTAGAATCTCTTGGCATAACGGGAAAAGTTATTTTAATTGATGGCGCA
CCGGAACTTTTGCAGCGTCTTGTCATCGAAAATTTGCCATCAGAAGTGGAAAATGACGAA
GCAATTCAAGCGCTCATTTTAGAGCATAGTTTTAAATTGGTGCTACCAAATGACACAAGC
GATCGATTGATGAAAGTTTTGGCAGAACGAGGCTGGGAGGCAAAAATGGCAAAAGTAAAA
GAATTGTTCAATGATTTTAGTTCGTTTAGCAAAGAATTTGTGCTCAAAGCACTAAATGCA
GTGCTTTACCGTATATTGATGCTCATTAAATTGGATTTGAAATCATTTCAGCAGTTGAAT
GCTACACCAATAATTTTGGTGAAACCAACCGAGATTACTTTACAAGCAATTGATGCTGAC
TATGGACTTCGAGTATACACTGAAAGCGAAATTGACATTCACAATATTGAGGGAAATCAT
TCGAGCATTCTAGAAAATTCGAATCTTCCGATCCTCGTCAATCATGCTTTTTAG

>g7861.t1 Gene=g7861 Length=2357
MSSRDRRIQTRVKLSDPGDEIVISGIAGRFPNSANIDEFSYNLYNKIDMVDDDERRWKHL
NEEIPKRYGKTVNLEKFDAQFFSIHYRQAHNMDPQARILQEHAYEAIIDAGVAPKSLRGS
RTGVFIGCCMAEADEHFFYGRGLKDGLGLTGTSRALLANRISFSMDLKGPSCTIDTACSS
SGYALDLAFNALRNGECDAAIVGGTNLLLHPATTLQFFRLGVLSKDGYCRPFDKDASGYC
RSEAINVLFLQKKRDAKRIYAELLYSKTNVDGFKNEGLTYPSGKIQIQLLEEFYKDIDID
PKTIDYVESHSTGTKVGDPEECFTLDTIFCTGREKALPVGSVKSNMGHSEASSSISSIIK
SLFIFENKKIPPNIHFKTPRPGIPSLEAERLKVVNEIQDFDGTLISVNSFGFGGANAHAL
LRKNMKEKINRGIPQDKLPRLLLWSGRTEEAVNVIFESILTQPLDAEYIALLQNVQTATP
SSNTYRGYGLFVQSIESENATCIARHIDNFASSKRPIVFVYSGMGSQWCEMGADLMNIPI
FAAAINKCHDILAEKQLDLKNIITSTDSKMFDNILHSFVGIAAIQIGLTDILRAIGLVPD
YIIGHSVGELGCAYADGCITDEEMILSAYSRGMASLETKVVYGSMAAVGVGYKELKNILD
EGVEIACHNSSDSCTISGPADLITAFVNKLKKENYFAKEVQCSHIPYHSSYIAQMGSKLL
LRLKDVIKYPKERSSKWISSSVPKNCWDTMDCRFSSAQYHTNNLLSPVLFEEASENLPKD
ALTIEIAPHGLLQAILKRTFPDGLHIGITQRGNKENSLFLLNSLGKIFENGVDMDISKLY
PPIEFPVSCGTKMISSLIKWDHSENWFVPKHEDKQHNDMRIVISLQDPEFEFISGHEIDG
RVLFPATGYLFLAWKLALQQNKQLFADFDVEFEDVKFLRACNIPADSSGVDLTVVVQRGT
GRFEVIEGKTAVVTGIVRPAADTKLTQVGFTQDTSDESAVELETKDFYKELRLRGYHYKN
LFKSVVSARADGSSGSIKWESNWVAFLDCLLQLQIISKDTRSLALPTGIRKILIKTKDHL
KFISELGDNEPLKANYNSDLNILQCGGVEIRGLQAQVVGRRPPPGIPVLESYQFIPHFPT
PVLSKNDIARFCVQLAIENLQISKVTSVEIDMSDDKEPLSEHFGNALCDLPLVRAELNYL
STRELKIPHVNVTNEEFSSFSNSTFVIRSNCLSNSEIIESIASQLSESGFILSRETIDTK
VIQIYGLSQGFQIVAVIQSIDETFVLIQYNKVQPKLPLNVIKINNNDSLWLPKLKEVAKT
EPTIVYVENEELSGVIGLVNCIRKEPGGNNVRCFYIDDQSAPPFDIENSFYKYQLEKNLA
INVYRDGAWGSYKHLSICPSYVKAPQETACYANSLTRGDLSSIKWQQSPLIDLTGKDIIR
LQYASLNFRDVMLATGKLSADVIGDNRLDLMCVMGFEFSGIKNDGRRVMGMRISGTLATH
AQADDVLLWDVPDNWTLEEAATVPCVYATVYAAFFLTTQIQKGKSILIHAGSGGIGLAAI
RVALAYGLEVFTTVSTEEKKNFLLEQFPQLKRENIGNSRDTSFEDLVKKRTHGKGVDYVL
NSLAEEKLLASVRCLCKGGKFLEIGKFDMANDNKLGLGDFLKELTFHAVLLDNFFKATRD
EKLILKELLDKDLNRGIIKPLKTNVFKADEVEKAFRLLASGKHIGKVILQIRENENDNAT
VPISVLPRVYCNPCLSYLICGGLGGFGLELADWLILRGCKYIVLSSSRGITKNYQKMRIR
IWESYGVKVIISTSDITTRDGCNNLITNAIQLAPVGGIFNLAVKLRDGILENQDSFTFDE
CMAPKAIATKHLDEISRTSCPLLQHFVVFSSVSCGRGNAGQSNYGMANSVMERIIEQRHK
VELPAKAIQWGAVGEVGIVADMQEDKLDMEIGGTLQQRISSCLEELDTLMTVNEPIVSSM
VVAEKRYTSTGKGGIIEMIMNIMSIKDIKSLSLETKLSELGMDSLMTVEISQALEREFNL
NVTPQELRSMTLLQLKAFEINGNFNGEIEKKMNGIEFLLRNLGEESNSNQPIIKLESEMD
TGYTKLLLIPGIEGTGGKMYYNLARKLKYPTYLLQVASCWHAKDLNEMYNAIIDDVLKLY
ENETTFLLVGYSFGAMLALKLAKTLESLGITGKVILIDGAPELLQRLVIENLPSEVENDE
AIQALILEHSFKLVLPNDTSDRLMKVLAERGWEAKMAKVKELFNDFSSFSKEFVLKALNA
VLYRILMLIKLDLKSFQQLNATPIILVKPTEITLQAIDADYGLRVYTESEIDIHNIEGNH
SSILENSNLPILVNHAF

Protein features from InterProScan

Transcript Database ID Name Start End E.value
30 g7861.t1 CDD cd00833 PKS 19 421 2.56921E-142
31 g7861.t1 CDD cd05195 enoyl_red 1439 1729 7.17317E-101
29 g7861.t1 CDD cd08954 KR_1_FAS_SDR_x 1671 1983 1.43023E-57
21 g7861.t1 Gene3D G3DSA:3.40.47.10 - 18 441 3.2E-140
26 g7861.t1 Gene3D G3DSA:3.30.70.3290 - 442 868 5.3E-170
24 g7861.t1 Gene3D G3DSA:3.40.366.10 - 513 831 5.3E-170
27 g7861.t1 Gene3D G3DSA:3.10.129.110 - 877 1123 3.2E-73
20 g7861.t1 Gene3D G3DSA:3.40.50.720 - 1305 1982 2.2E-281
23 g7861.t1 Gene3D G3DSA:3.90.180.10 - 1399 1749 2.2E-281
22 g7861.t1 Gene3D G3DSA:1.10.1200.10 - 1990 2065 2.8E-16
25 g7861.t1 Gene3D G3DSA:3.40.50.1820 - 2105 2349 7.1E-40
28 g7861.t1 Gene3D G3DSA:1.10.1470.20 Fatty acid synthase; domain 2 2204 2291 7.1E-40
10 g7861.t1 PANTHER PTHR43775 FATTY ACID SYNTHASE 4 2354 0.0
11 g7861.t1 PANTHER PTHR43775:SF23 FATTY ACID SYNTHASE 3 4 2354 0.0
4 g7861.t1 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 20 256 4.3E-64
1 g7861.t1 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 376 1.3E-31
9 g7861.t1 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 379 488 1.6E-30
7 g7861.t1 Pfam PF00698 Acyl transferase domain 518 827 5.9E-63
3 g7861.t1 Pfam PF14765 Polyketide synthase dehydratase 888 1121 3.4E-15
8 g7861.t1 Pfam PF13602 Zinc-binding dehydrogenase 1597 1729 7.7E-14
2 g7861.t1 Pfam PF08659 KR domain 1756 1934 1.5E-38
5 g7861.t1 Pfam PF00550 Phosphopantetheine attachment site 2000 2054 3.0E-8
6 g7861.t1 Pfam PF00975 Thioesterase domain 2105 2355 5.0E-12
32 g7861.t1 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 169 185 -
33 g7861.t1 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2019 2034 -
38 g7861.t1 ProSiteProfiles PS50075 Carrier protein (CP) domain profile. 1986 2071 10.232
36 g7861.t1 SMART SM00825 Beta-ketoacyl synthase 21 424 1.2E-105
35 g7861.t1 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 520 813 1.2E-24
34 g7861.t1 SMART SM00829 PKS_ER_names_mod 1418 1729 2.3E-116
37 g7861.t1 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1755 1936 9.1E-21
14 g7861.t1 SUPERFAMILY SSF53901 Thiolase-like 18 423 2.47E-67
13 g7861.t1 SUPERFAMILY SSF52151 FabD/lysophospholipase-like 517 802 1.23E-38
19 g7861.t1 SUPERFAMILY SSF55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase 643 700 4.71E-8
17 g7861.t1 SUPERFAMILY SSF50129 GroES-like 1438 1549 5.12E-16
15 g7861.t1 SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains 1514 1678 1.72E-34
16 g7861.t1 SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains 1757 1951 1.46E-24
18 g7861.t1 SUPERFAMILY SSF47336 ACP-like 1995 2055 3.66E-9
12 g7861.t1 SUPERFAMILY SSF53474 alpha/beta-Hydrolases 2079 2352 7.53E-26

Transmembrane regions from TMHMM

Disordered region

IUPRED3 score over 0.5 is predictive of a disordered region.

GO terms from InterProScan

GOID TERM ONTOLOGY
GO:0016746 acyltransferase activity MF
GO:0009058 biosynthetic process BP
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity MF
GO:0016740 transferase activity MF
GO:0006633 fatty acid biosynthetic process BP
GO:0016491 oxidoreductase activity MF
GO:0004312 fatty acid synthase activity MF

KEGG

Orthology

Pathway

This gene does not belong to any pathways.

Expression

Transcript expression in Pv11 cells

TPM values are indicated as average +/- STDEV.

Differential expression

Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below. There were no conditions that were differentially expressed