Gene loci information

Transcript annotation

  • This transcript has been annotated as Mediator of RNA polymerase II transcription subunit 12.

Parent gene

Gene structure

  • The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively. More specific data are shown in the table below.

Chromosome Gene Transcript Category ID Start End
chr_1 g9812 g9812.t1 TSS g9812.t1 5355892 5355892
chr_1 g9812 g9812.t1 isoform g9812.t1 5355995 5365304
chr_1 g9812 g9812.t1 exon g9812.t1.exon1 5355995 5357650
chr_1 g9812 g9812.t1 cds g9812.t1.CDS1 5355995 5357650
chr_1 g9812 g9812.t1 exon g9812.t1.exon2 5358011 5359853
chr_1 g9812 g9812.t1 cds g9812.t1.CDS2 5358011 5359853
chr_1 g9812 g9812.t1 exon g9812.t1.exon3 5359916 5360414
chr_1 g9812 g9812.t1 cds g9812.t1.CDS3 5359916 5360414
chr_1 g9812 g9812.t1 exon g9812.t1.exon4 5361146 5362066
chr_1 g9812 g9812.t1 cds g9812.t1.CDS4 5361146 5362066
chr_1 g9812 g9812.t1 exon g9812.t1.exon5 5362390 5363537
chr_1 g9812 g9812.t1 cds g9812.t1.CDS5 5362390 5363537
chr_1 g9812 g9812.t1 exon g9812.t1.exon6 5363685 5363708
chr_1 g9812 g9812.t1 cds g9812.t1.CDS6 5363685 5363708
chr_1 g9812 g9812.t1 exon g9812.t1.exon7 5363778 5364866
chr_1 g9812 g9812.t1 cds g9812.t1.CDS7 5363778 5364866
chr_1 g9812 g9812.t1 exon g9812.t1.exon8 5365168 5365304
chr_1 g9812 g9812.t1 cds g9812.t1.CDS8 5365168 5365304
chr_1 g9812 g9812.t1 TTS g9812.t1 NA NA

Sequences

>g9812.t1 Gene=g9812 Length=7317
ATGTTTAGCGAGGCATATCTTGAGAAGCGTCCGCTAAAGAGGCCAAAATTAGGCCCGGCA
GACGTCTATCCGCAAGAAGTAAAGCAAAAAGAAGATGAGTTAACTTCTCTCAATGTAAAA
CACGGCTTTTCAGCCACGATTCAATCGAGTGAAGAATTTGGGACTGCCAGAAATTGTAAT
GTGACCGCCTCAAAGGTTGGCGCATATTTCAATGCAATTTTGGCCAAAAAAGAAGAACTT
GCGACGTTAACTGACTCAGGGCGTAAAAAACAACACGTAAAAGATAACTTTTGGCCTGTA
ACTCAAAGAACTAAGCAAACTTTAGACAATTGGTTTAAGGATTTAGCTGGAAATAAACCA
TTAAGTAGTTTAGCTAAGAAAGCACCGTCATTTAATAAAAAAGAGGAAATTTTCGCAATG
CTCTGTGAAAATCAAGTTACAATGCAAAGAGCTGCATGGTTTATTAAACTTTCATCAGCT
TATACAGTTGCAGTGTCAGAAGCGAAAATTAAAAAACGACAAATGCCTGATCCAGCAACT
GAATGGACAGGAACAATGATTAAATTTTTAAAAGATTTAGTACCGAAATTGCTTGAATAT
TATCATACAGGACCACCAATTGAAAAACCTTCATCAAACATTTCTTCTAATACTAATCCT
TCATCTAATCTCAATACAAGTTCTTCCTCATCTACATCAACATTAACTATACCACCGCCT
CTTGCTAGTCCAGCTGGTTCTTCGTCTACAAGCACTTCATTAATTCCAATTCCAGCAACA
CCACAAGAGGAGCAAAAATTGGCTTTAAAACAATGGAATTATTGTACGCAATTGTGTAAA
TACATGTTTGAGGAAGGACTTTTAGATAAACATGAGTTTCTAAATTGGATCCTTGAATTA
CTTGATAAACTTAGAACTCAGCCACAAAGTGAAGATGGAATACTCAAGCTTTATCTGCCA
CTAACTTTAGCTTATATGCAAGATTTTGTCATGTCAGAGCGATTGTCTAGAAAATTGGCA
TATTTATCAGCTAAAAAGCTCTCATCAATGCTTAATGACATGTTAAATCATATTATTATA
GATGGTAATAAAAATGATCAGAATTCAGAAAATAAGACTGGTGAAAATGGAGAAATAAAA
AATTTGAACCCTTATGAGAAGGCACTTGAAGAATATTTGACTTGTTGTCAACATAGAGAC
ATAATTATGCAATTGAGTTGTATTTTACAAGTTATAACACTTGATTGCCCAACAGCACTT
ATTTGGAGTGGTGTGGGTGAGAATCGACAATCGACATTGACCGGTAGTCCGCTTGACCAC
TTGCCCATTTCACCATCAACTCTTCCTATGCCTGAGAAATCACCAAAAAGCAATGAAGAG
TTGAGAATGAAATTAAAAGCAGCAGAAAACAATATAAAATATCGATCGCAACAAGCAGAA
TCACGTTGGTGTGCTGATAAGTGGCGAACATTGACTGGGAATGCAACAATTAAATTATTG
ACAATTTTAGACACACTTGATAGTTATTTCTTTGATAGAATGGATAGCAACAATTCATTA
GATACATTATATGCTAAAATATTTCCATCATTACAAGATTCATCGAGAGAACATGGCAAC
AGTAGTGGTGATAATAAAGATCAAAAATTTGATTATGATGTAAATTCAGATGAAGATACA
GTTAAGATTCTTTGTGAATGGGCAGTATCAACACATCGTTGGGGTGAACACCGAGCATTT
GTTGTTGCCCGTCTTTTAGATAAAAGACAAAATGAAGTTTTAGCAATGGAAAATGAAGCC
AATAATATTGATGATAAAGATTCAGACTTTGGCTCATTTGGGACGCCAGTTTTTCAAGGA
ATTTTACTGAAATTTCTTGATAATGCGCCAGTCCTTGAAGAAAATGGAAGTTTACAAAAT
AGAAATCAATTTAAAAATCTTGTTCATCTCTTTAGTGAACTGATTCGTAATGATGTTTTC
TCACATGATGCTTATATGTGCACTCTAATTTCACGAGGCGATTTACTTAATCCACCATCC
ACATTTACTTCCAATATTGTAACAAAAAGTTCAACAAATGTTGCTCAAACAAGCAGCAGT
GCAAATGCAGGCGGCGATGATGATTTCTTTTCTGAAATTGATTTTAAATTAAAACCACCG
AAAATGGAGGAATTTGATGACTCGAATGTTGATGATGATTTAGAAAAATTAATTCAAAAT
ATTAAAGATGGACAACAAAATTCGATGGATGCACCAGATAGTCCAAAAGACAATGAAAAT
CTTACCAATTTGCCATCAATCACGAATGACAAAAACATGACATCGGGAAATGCTGGCGCT
TGTCGTCACTATCTTTATACAATGCATTTTCCTTTATCACAAGATGATGCATCACAACAT
GATTGTAATCAACGCTATGTTCTACTTTATGGTGTAGGAAAAGAACGCGATGAACGAAAA
CATTCAGTTAAAAAAATGTCAAAAGAAATTTGTAAATTATTTAGTAAAAAATTCAGTATC
GATGTTGCCGAAGGCGGAAAAGTGAAAAAACATTCAAGAAATGAATTTAATTTTGAATCA
ACACTCAACAAGTGTCAAATGATGTGCTATTTTGACCAACATTTTGTAACATGGCAATGC
GCTGTGACTGTGCAAGAAATGCTCAATAGCTTTGCTAATGGAAACTCAAATTATTTGCCA
GTTGCTGAGCATGTTGCTTTCTTATTTGACCTCATGGAAGTTGCTTTAAATATTTATGGA
GTAATTGACATGTGTATTCAAATTCTTAAAGAATTACCTGATGTTGAAGCACAATTAATG
GCAAAAAATTCAAATTTGATCAAGAGTTATACGACAACATTGAGTTTGTATATAGTTGGA
ATTTTAAGAAGATACAATAGTTGCTTGTTGCTTTCACCAGATCAAACAACAGCTGTTTTT
GAAGGTCTTTGTAAAGTTGTTAAGCACGTCAGTAATCCTTCAGATTGTACATCAGCTGAA
AGATGTATTCTTGCTTATCTTTATGACCTTTATCTCGCATGTTCAATATTAAGAACAAAA
CCACCTTCCGAACCATTTCATAATGCTTATCCGAAGATAAAACAAACAATTTACGCTCCA
ATAAAACTCTCACCATCACCACAACAACATAATCCACAATATATGATGGAAATTCTCACG
AATCCAAAGCGAGGAAAAATTGAATCAAGTTGGGGTCGACAATTGAGTGAATCGCAGCAG
AATCGATACAGTTTTGTGTGTAATGCAATTATCGCGATATGTCGAGAATCTGACAATGAT
AAATTAAATGATATTGCAATCATGTGTGCTGAATTAACAGCATGTTGTAATTCTTTGAGT
GCAGAATGGTTTGGCGCACTTGGTGCTCTTTGCAATACGAAAAATGAGACGGGCTATTAT
GTAGAAATTCTCAATTCTGTTGATTTACAAAATGTCCATATTTACAATTCAATTGCGGTT
TTCACTTGCATCTTGATTGCCCGACATTGTTTCTCACTTGTTGACTTTGTTGCCCTTGTC
GCATTGCCTGCTTTATTGCTTTCATGCCGAAGTGAAGCAATTATGAATGAAGCTGAGGCT
AGCGCCAGATTGACTTGTCATATTTTGTTGCGATTATTTCAGGCAATCGAATATCCGCAA
GCTTCAATGTACTCTGTCAGTACTTCACCAATTCAGAGTGTTGGTCCAATGAATAGCAAT
ATTAAATTGAGTTGTGACAGATTGTTGCTTGGTGGTGCACAGAAAAATATTCCAGTTGCG
CCTGTTTTAGCTGTTTTGAAAGCAATTCTTGTCGTTGCTGATGCTACTGTGAATAAAACT
TCGTATGGAAGTGGCAAAAAGAGTGGATTAAATACACCCGTGCATCCTGGGAGCACACCG
AAAAGCAGCATGAGTGGACCAGTTGATCTGAGTCACATTTTGGGAACTAGAGAAGATATG
GGAATTCTTGGTGATGATGATATGGGACTTGACCTTGGAAGTGCATCTAACAATCTCAAC
AGTAGCGAAAATGCTCCAAGCTTGTCTGATTTTGCACATCATGTTCTTAAGCAGATTTGT
ACACAAGAATGGGTGCTTGAATGTTGCCTCAAGAATTGCGATGAGATGTGTAAAGATGAA
ATTCTTTTAGATAATATGCTGACAAATAAGCAAGCTCAACGACTCTTGCATATGATTGTT
TATGACCAAGAAACAAATGCAAAGATTGAAGCCAATATGGATCAGAAATCACAGATTGTT
CGAATTTTGGAAAATTTAGAGCAATGGTCTTTAAGAATTTCTTTGTTAGATTTACAACTT
ATGTACAAACAAACTCAAAGTAATTCATCCGAATTCTCATCGTGGTTGGATACAGTTGCA
CGTGCTGCAATTGATGTTTTTATACCAAATGAAGAACGAAAATTGACTAAAAATAAACCA
CCTAAATGGCTTATTGCACCGTTGGTAGGAAAATTGCCGAGTGAAGTGCAAGGAAGAATT
TTAAAGGTTGCCGGGCAAGTACTTGAAAGTACAAACAGTTTTGGTGCCAAAAACAAATCA
TCTGAGAATACTGAAGGCAATGGTTCGAATGGAAGAAAGCGAAATACACAGATTGACAAT
CAACCTTTCCTTGGTCTCATTCTCACATGTCTAAGGGGACAAGATGATCAAAAAGAAACG
CTACTGCAATCACTTCATTCTCAACTGTCACAATTTCTTCAGAACAAGGACTTAGAAAAC
GTGGGAGGAATTGATGATCCAAATGGACGTCAAGAGATGCTTAGCGCATTGCAATTGAGA
TTTTCCCTTGTGGGAAGCATGTTTGATACAATTCAAAAAAATTCAACATCAACAACCGAT
TGGGCTTTGTTACTTGCACAAATGATGAGCCAGGGAATAATCGATCTGAATAACAATTCC
GCTTTATTTTATACAGCATTAGACATGTTGACGACACTTATACATTCGACTCTTATCATC
GATAACGAGCGAGATGAAAACAAGAAGTTATACACGAATCTCATGAAGAAACTTCGTAAA
GAATTGGCTGATAAAAATAGTCCTACGATAAAGTTGGTAAGGCAATTGCTGCCACATGCA
AAAGCAGCATGCTCCAATACTTGTGAAGTGATTGCATGCGAACCAGTTGGAAGTCTCATG
GATACGAAAGGATTAAGAGTTAATGAGAAGGAAAAAGTTAGCATGTGGGATTTACTTGAA
GGTCATAAAAATCCTGCACCTTTATTATGGACATGGTTTGGTGCCGTGAAAATGGAAAGA
AAGCCTCTAACTTATGAAGAAAATCATCGTCTATTGAAATATCACACTCATAGCTTAGTA
AAGCCATCATCATATTATTATGAACCTTTACCACTTCCACCAGAAGATGCAGAAGAGCCA
ATGCAAGATAAAAATCGAGATGATAAAGCAGATACACCTTCGTCTGTTGAATCACCTGCT
GCACCTGGATCAGCTAAAAGAAAAGCTGCTAAAAGACAGAGAAAACCAAAACCTGCAGCA
ACTCCAACTCAAATTAATCCAATGCAGCAGCAGATGCAGAATCAAGGCATGATGGGACAA
CAAATGATGAATCCACAGATGAACCAACAATTTAATCCCAATCAGCAGATGAATAATATG
GGAATGATGCAAAACAATATGATGATGAATCAAATGAATCCAATGGGTAGTGGAATGGGT
CAAAATATGAATCAAGGTCAAATGCAGATGAATAATCAAATGGGCATGAATCAGATGCAA
AACAATCCACAAATGGGACAAATGAATCCCATGCAATATCAACAACAGCAGCAACAGCAA
CAAATGAATCAAATGGGGCAGATGAACATGAATATGAATCAGAATATGAACATGGCTCAA
CAAAATATGAATATGAACATGAATCAAATGGGTCAACAGAATCAAAATTGGAATTATAAT
CCCATGCAGCAACAACAAGCTCAACAGCAACAACAACAAGGTCCTCAAGGCAATCAACAA
CAGTTCTACAATCAAAATGTCGCCGGAGGTGGTGGTGGCATGAGTGGAAACATGGGAAAC
ACACAGAACGATGAACACACTGATGATAAATTGAATCAATTCGATCGACCTCCTTTGACA
ACTTCAAAACAAGCTATTTCAAATATGTTACAAATGCGTCAACGACATCCCAACCCAAAT
CCAAATACTCAGTTCAACATGCAACAACAAAGAATGCAAATGATGCAGAATCAACAACAG
CAGCAAAATCCTCAAATGCTTCAAAGACAGCAAATGCTTCGAATGAGAATGGGAAAACCA
ATGAATACAACTGGTGGAATGATAAATCAAACAGTGAATACAAACGCAATGGGAATGGGT
GGAGCACAACAACAAAATCCAAATGCAATGATGCAAGGCAATCAACAGGCAATGATGGCT
ACTGGTGGTCAAAATCAAGGCATGATGGGACAACAAGCACAAAATCCAATAAATACAATG
CAACAGCAAGGTAATCAGCAAGCGATGATGACGCCTGGAAATCAAAATCAGGGCATGATG
GGACAGCAGAATCCAAATGCTATGAACACAATGCAGCAGCAAAGCAATCAGCAAGGTATG
ATGGGTGCAGGCAACCAAAATCAGGGAATGATGGGCGTTGGTAATCAAATGGGAAATATG
CAAGCACAAATGCATCAACAGGGAAATACTGGAAATCCACAACAGCAAGGTGGAATGTTT
AATCCAAATCAATATCAAAATATGAATCAAAACTTTTCTGGTTACAATCCAACGATGGGA
AATCAAGGTGGAATGCAGAATCAACAGCAAGGAACAAATGCAGGTGGTGGAGCGATGATG
AACAATTTTCAGCAAACAAACAATCCAAATGTTGCCGCACAACAGCAACCAAGAAATCCA
CAGGCAGAATTTCTTGCCCAGCAGCGTCGTAATCAATTCATGCAAAATCAACAGCAACAA
CAAAATCCGCAAATGCAACAACAGCAGCAAGCTCCAAACGTAACGATGAACTCAAATATG
GGCTCAAATATGAATGTTGGTCCACAACAAGGAGGTAATTTGCCGCCATATCGCCAACAG
CAAGGCGGCAAACCAATGATAAATCCAAGCACTCAGCAATTTCAGGAAATGCGTATGCGG
CAAATGATGATGAAACAACAACAACAGCAGCAACAGCAAGGTATGGGACCAAATCAAAAT
TTACAACAACAAACGCCTGCACTTGTCGCTCAACTCCAACGCTCAATGCCAAGTCAAATG
ATGGGTCAACAAAATCAGCAACAGCAGCAACAAAATTTCAATCAAGGACCATTTTAA

>g9812.t1 Gene=g9812 Length=2438
MFSEAYLEKRPLKRPKLGPADVYPQEVKQKEDELTSLNVKHGFSATIQSSEEFGTARNCN
VTASKVGAYFNAILAKKEELATLTDSGRKKQHVKDNFWPVTQRTKQTLDNWFKDLAGNKP
LSSLAKKAPSFNKKEEIFAMLCENQVTMQRAAWFIKLSSAYTVAVSEAKIKKRQMPDPAT
EWTGTMIKFLKDLVPKLLEYYHTGPPIEKPSSNISSNTNPSSNLNTSSSSSTSTLTIPPP
LASPAGSSSTSTSLIPIPATPQEEQKLALKQWNYCTQLCKYMFEEGLLDKHEFLNWILEL
LDKLRTQPQSEDGILKLYLPLTLAYMQDFVMSERLSRKLAYLSAKKLSSMLNDMLNHIII
DGNKNDQNSENKTGENGEIKNLNPYEKALEEYLTCCQHRDIIMQLSCILQVITLDCPTAL
IWSGVGENRQSTLTGSPLDHLPISPSTLPMPEKSPKSNEELRMKLKAAENNIKYRSQQAE
SRWCADKWRTLTGNATIKLLTILDTLDSYFFDRMDSNNSLDTLYAKIFPSLQDSSREHGN
SSGDNKDQKFDYDVNSDEDTVKILCEWAVSTHRWGEHRAFVVARLLDKRQNEVLAMENEA
NNIDDKDSDFGSFGTPVFQGILLKFLDNAPVLEENGSLQNRNQFKNLVHLFSELIRNDVF
SHDAYMCTLISRGDLLNPPSTFTSNIVTKSSTNVAQTSSSANAGGDDDFFSEIDFKLKPP
KMEEFDDSNVDDDLEKLIQNIKDGQQNSMDAPDSPKDNENLTNLPSITNDKNMTSGNAGA
CRHYLYTMHFPLSQDDASQHDCNQRYVLLYGVGKERDERKHSVKKMSKEICKLFSKKFSI
DVAEGGKVKKHSRNEFNFESTLNKCQMMCYFDQHFVTWQCAVTVQEMLNSFANGNSNYLP
VAEHVAFLFDLMEVALNIYGVIDMCIQILKELPDVEAQLMAKNSNLIKSYTTTLSLYIVG
ILRRYNSCLLLSPDQTTAVFEGLCKVVKHVSNPSDCTSAERCILAYLYDLYLACSILRTK
PPSEPFHNAYPKIKQTIYAPIKLSPSPQQHNPQYMMEILTNPKRGKIESSWGRQLSESQQ
NRYSFVCNAIIAICRESDNDKLNDIAIMCAELTACCNSLSAEWFGALGALCNTKNETGYY
VEILNSVDLQNVHIYNSIAVFTCILIARHCFSLVDFVALVALPALLLSCRSEAIMNEAEA
SARLTCHILLRLFQAIEYPQASMYSVSTSPIQSVGPMNSNIKLSCDRLLLGGAQKNIPVA
PVLAVLKAILVVADATVNKTSYGSGKKSGLNTPVHPGSTPKSSMSGPVDLSHILGTREDM
GILGDDDMGLDLGSASNNLNSSENAPSLSDFAHHVLKQICTQEWVLECCLKNCDEMCKDE
ILLDNMLTNKQAQRLLHMIVYDQETNAKIEANMDQKSQIVRILENLEQWSLRISLLDLQL
MYKQTQSNSSEFSSWLDTVARAAIDVFIPNEERKLTKNKPPKWLIAPLVGKLPSEVQGRI
LKVAGQVLESTNSFGAKNKSSENTEGNGSNGRKRNTQIDNQPFLGLILTCLRGQDDQKET
LLQSLHSQLSQFLQNKDLENVGGIDDPNGRQEMLSALQLRFSLVGSMFDTIQKNSTSTTD
WALLLAQMMSQGIIDLNNNSALFYTALDMLTTLIHSTLIIDNERDENKKLYTNLMKKLRK
ELADKNSPTIKLVRQLLPHAKAACSNTCEVIACEPVGSLMDTKGLRVNEKEKVSMWDLLE
GHKNPAPLLWTWFGAVKMERKPLTYEENHRLLKYHTHSLVKPSSYYYEPLPLPPEDAEEP
MQDKNRDDKADTPSSVESPAAPGSAKRKAAKRQRKPKPAATPTQINPMQQQMQNQGMMGQ
QMMNPQMNQQFNPNQQMNNMGMMQNNMMMNQMNPMGSGMGQNMNQGQMQMNNQMGMNQMQ
NNPQMGQMNPMQYQQQQQQQQMNQMGQMNMNMNQNMNMAQQNMNMNMNQMGQQNQNWNYN
PMQQQQAQQQQQQGPQGNQQQFYNQNVAGGGGGMSGNMGNTQNDEHTDDKLNQFDRPPLT
TSKQAISNMLQMRQRHPNPNPNTQFNMQQQRMQMMQNQQQQQNPQMLQRQQMLRMRMGKP
MNTTGGMINQTVNTNAMGMGGAQQQNPNAMMQGNQQAMMATGGQNQGMMGQQAQNPINTM
QQQGNQQAMMTPGNQNQGMMGQQNPNAMNTMQQQSNQQGMMGAGNQNQGMMGVGNQMGNM
QAQMHQQGNTGNPQQQGGMFNPNQYQNMNQNFSGYNPTMGNQGGMQNQQQGTNAGGGAMM
NNFQQTNNPNVAAQQQPRNPQAEFLAQQRRNQFMQNQQQQQNPQMQQQQQAPNVTMNSNM
GSNMNVGPQQGGNLPPYRQQQGGKPMINPSTQQFQEMRMRQMMMKQQQQQQQQGMGPNQN
LQQQTPALVAQLQRSMPSQMMGQQNQQQQQQNFNQGPF

Protein features from InterProScan

Transcript Database ID Name Start End E.value
12 g9812.t1 Coils Coil Coil 458 478 -
13 g9812.t1 Coils Coil Coil 586 606 -
6 g9812.t1 MobiDBLite mobidb-lite consensus disorder prediction 209 253 -
8 g9812.t1 MobiDBLite mobidb-lite consensus disorder prediction 1284 1306 -
11 g9812.t1 MobiDBLite mobidb-lite consensus disorder prediction 1514 1536 -
7 g9812.t1 MobiDBLite mobidb-lite consensus disorder prediction 1797 1813 -
10 g9812.t1 MobiDBLite mobidb-lite consensus disorder prediction 1797 1848 -
9 g9812.t1 MobiDBLite mobidb-lite consensus disorder prediction 2313 2332 -
5 g9812.t1 MobiDBLite mobidb-lite consensus disorder prediction 2379 2438 -
3 g9812.t1 PANTHER PTHR46007 MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 2 2000 0.0
1 g9812.t1 Pfam PF09497 Transcription mediator complex subunit Med12 100 156 2.3E-17
2 g9812.t1 Pfam PF12145 Eukaryotic Mediator 12 subunit domain 328 809 4.5E-179
4 g9812.t1 SMART SM01281 Med12_2 96 156 1.3E-30

Transmembrane regions from TMHMM

Disordered region

IUPRED3 score over 0.5 is predictive of a disordered region.

GO terms from InterProScan

GOID TERM ONTOLOGY
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0016592 mediator complex CC
GO:0003712 transcription coregulator activity MF

KEGG

Orthology

Pathway

  • This transcript belongs to the following pathways

Expression

Transcript expression in Pv11 cells

TPM values are indicated as average +/- STDEV.

Differential expression

Differentially expressed genes were identified with DESeq2 using the ‘run_DE_analysis.pl’ script from Trinity. Transcripts were determined as differentially expressed when (1) FDR < 0.05 (2) fold change > 2 (TPM calculated by RSEM). DE information and fold change between conditions are indicated in the plot below.

Raw TPM values