Gene loci information

Isoforms of this gene

  • There are 1 isoforms that are expressed from this gene.
  • The longest transcript is g11168.t1
  • List of isoforms

g11168.t1

The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively.

KEGG

Orthology

This gene did not have any KEGG Ortholog annotations (KAAS, GHOSTZ).

Gene conservation patterns

Diptera wide analysis

The Orthogroup for the longest transcript (g11168.t1) is OG0000023. Other genes in this orthogroup contains the following. This list is ordered by phylogeny determined by OrthoFinder analysis. Genes from ENSEMBL are linked to their corresponding pages. For P. nubifer and P. vanderplanki, they are linked to the Midgebase1 and Midgebase2 pages.

Conservation

Organism Abb. ID No. Orthologs Ortholog ID
Atta cephalotes ACEPH 7 XP_012061803.1, XP_012064371.1, XP_012061805.1, XP_012061804.1, XP_012061806.1, XP_012061788.1, XP_012054316.1
Apis mellifera AMELL 3 GB50761-PA, GB40926-PA, GB45565-PA
Culicoides sonorensis CSONO 11 CSON005566-1, CSON009526-1, CSON009345-1, CSON006987-1, CSON010158-1, CSON014216-1, CSON009849-1, CSON005505-1, CSON008302-1, CSON009338-1, CSON008965-1
Polypedilum nubifer PNUBI 13 Pn.09357, Pn.03943, Pn.17038, Pn.12295, Pn.11695, Pn.07796, Pn.07634, Pn.07564, Pn.03944, Pn.08588, Pn.11696, Pn.02063, Pn.03675
Polypedilum vanderplanki PVAND 10 g17225.t1, g8453.t1, g16591.t1, g9831.t1, g15013.t5, g919.t10, g11269.t52, g11168.t1, g920.t1, g921.t1
Polypedilum pembai PPEMB 9 g2654.t1, g8610.t1, g893.t1, g9584.t1, g2914.t1, g1677.t1, g8639.t1, g3416.t1, g6068.t1
Belgica antarctica BANTA 9 IU25_09254-mRNA-1, IU25_02153-mRNA-1, IU25_04772-mRNA-1, IU25_07410-mRNA-1, IU25_06051-mRNA-1, IU25_05040-mRNA-1, IU25_07683-mRNA-1, IU25_09253-mRNA-1, IU25_08729-mRNA-1
Clunio marinus CMARI 14 CRL04355.1, CRK89382.1, CRL07669.1, CRK91499.1, CRK90973.1, CRL03696.1, CRL01806.1, CRK90976.1, CRK93251.1, CRL00681.1, CRL06219.1, CRK91346.1, CRK92938.1, CRL02608.1
Aedes aegypti lvpagwg AAEGYL 16 AAEL011929-PA, AAEL020852-PA, AAEL002177-PA, AAEL011916-PA, AAEL002347-PA, AAEL015294-PA, AAEL011922-PB, AAEL006627-PA, AAEL024934-PA, AAEL017475-PB, AAEL007938-PA, AAEL002360-PB, AAEL024686-PA, AAEL011920-PB, AAEL011917-PA, AAEL022646-PA
Culex quinquefasciatus quinquefasciatus CQUINQ 13 EDS35880.1, EDS27558.1, EDS35879.1, EDS29483.1, EDS29122.1, EDS35881.1, EDS29123.1, EDS35878.1, EDS27062.1, EDS30402.1, EDS39470.1, EDS41558.1, EDS35876.1
Culex quinquefasciatus CQUIN 13 CPIJ011382-PA, CPIJ011378-PA, CPIJ011383-PA, CPIJ018991-PA, CPIJ011380-PA, CPIJ007384-PA, CPIJ003915-PA, CPIJ007385-PA, CPIJ007838-PA, CPIJ011381-PA, CPIJ006568-PA, CPIJ018205-PA, CPIJ013905-PA
Anopheles atroparvus AATRO 12 AATE006047-PA, AATE020468-PA, AATE017487-PA, AATE008707-PA, AATE016408-PA, AATE020343-PA, AATE008926-PA, AATE018014-PA, AATE000218-PA, AATE001558-PA, AATE006335-PA, AATE012275-PA
Anopheles sinensis china ASINEC 10 ASIC018082-PA, ASIC016660-PA, ASIC018087-PA, ASIC019170-PA, ASIC019011-PA, ASIC013324-PA, ASIC018089-PA, ASIC008106-PA, ASIC018088-PA, ASIC018085-PA
Anopheles dirus ADIRU 9 ADIR001949-PA, ADIR001568-PA, ADIR001566-PA, ADIR003674-PA, ADIR015748-PA, ADIR015749-PA, ADIR015747-PA, ADIR003249-PA, ADIR003672-PA
Anopheles farauti AFARA 9 AFAF014460-PA, AFAF018828-PA, AFAF001407-PA, AFAF006957-PA, AFAF014071-PA, AFAF015578-PA, AFAF015651-PA, AFAF015756-PA, AFAF009370-PA
Anopheles epiroticus AEPIR 8 AEPI009884-PA, AEPI003042-PA, AEPI010699-PA, AEPI002781-PA, AEPI015350-PA, AEPI009883-PA, AEPI015349-PA, AEPI015429-PA
Anopheles christyi ACHRI 7 ACHR007584-PA, ACHR003523-PA, ACHR008490-PA, ACHR007621-PA, ACHR008255-PA, ACHR006714-PA, ACHR007623-PA
Anopheles merus AMERU 11 AMEM011180-PA, AMEM015606-PA, AMEM018315-PA, AMEM014742-PA, AMEM013132-PA, AMEM016815-PA, AMEM000182-PA, AMEM005710-PA, AMEM012608-PA, AMEM000517-PA, AMEM012936-PA
Anopheles melas AMELA 8 AMEC018039-PA, AMEC014421-PA, AMEC011861-PA, AMEC014616-PA, AMEC000638-PA, AMEC019485-PA, AMEC000310-PA, AMEC023339-PA
Anopheles arabiensis AARAB 14 AARA009824-PA, AARA002987-PA, AARA008583-PA, AARA017924-PA, AARA017343-PA, AARA009985-PA, AARA017927-PA, AARA017926-PA, AARA017342-PA, AARA017925-PA, AARA016042-PA, AARA008580-PA, AARA008584-PA, AARA016041-PA
Anopheles coluzzii ACOLU 14 ACOM035291-PA, ACOM023343-PA, ACOM023336-PA, ACOM032182-PA, ACOM032178-PA, ACOM035290-PA, ACOM025320-PA, ACOM023345-PA, ACOM024024-PA, ACOM032179-PA, ACOM025322-PA, ACOM032176-PA, ACOM037675-PA, ACOM035289-PA
Anopheles coluzzii ngousso ACOLUN 15 ACON011920-PA, ACON005196-PA, ACON011919-PA, ACON007141-PA, ACON011918-PA, ACON006709-PA, ACON005194-PA, ACON007142-PA, ACON011917-PA, ACON003807-PA, ACON003971-PA, ACON006707-PA, ACON006710-PA, ACON006711-PA, ACON005195-PA
Anopheles gambiae AGAMB 15 AGAP005194-PA, AGAP007141-PA, AGAP006709-PA, AGAP011920-PA, AGAP005195-PA, AGAP003971-PA, AGAP006707-PA, AGAP005196-PA, AGAP011917-PA, AGAP007142-PA, AGAP003807-PA, AGAP006710-PA, AGAP006711-PA, AGAP011919-PA, AGAP011918-PA
Anopheles quadriannulatus AQUAD 12 AQUA016640-PA, AQUA010105-PA, AQUA003588-PA, AQUA017312-PA, AQUA009156-PA, AQUA003587-PA, AQUA016641-PA, AQUA017310-PA, AQUA008376-PA, AQUA017311-PA, AQUA001407-PA, AQUA003589-PA
Anopheles minimus AMINI 9 AMIN015584-PA, AMIN002894-PA, AMIN000316-PA, AMIN007355-PA, AMIN010123-PA, AMIN015582-PA, AMIN015583-PA, AMIN007354-PA, AMIN015585-PA
Anopheles culicifacies ACULI 8 ACUA021419-PA, ACUA013954-PA, ACUA015446-PA, ACUA025452-PA, ACUA020400-PA, ACUA025506-PA, ACUA020505-PA, ACUA008419-PA
Anopheles funestus AFUNE 12 AFUN022159-PA, AFUN001574-PA, AFUN020948-PA, AFUN022158-PA, AFUN022156-PA, AFUN018482-PA, AFUN020947-PA, AFUN021439-PA, AFUN010824-PA, AFUN020946-PA, AFUN022157-PA, AFUN010779-PA
Anopheles stephensi indian ASTEPI 10 ASTEI09064-PA, ASTEI00868-PA, ASTEI09253-PA, ASTEI10032-PA, ASTEI09252-PA, ASTEI05110-PA, ASTEI10033-PA, ASTEI05109-PA, ASTEI00973-PA, ASTEI11652-PA
Anopheles stephensi ASTEP 11 ASTE010164-PA, ASTE002611-PA, ASTE010330-PA, ASTE016174-PA, ASTE015968-PA, ASTE015967-PA, ASTE016173-PA, ASTE016172-PA, ASTE015969-PA, ASTE009169-PA, ASTE015970-PA
Anopheles albimanus AALBI 6 AALB015542-PA, AALB015540-PA, AALB003136-PA, AALB015541-PA, AALB015543-PA, AALB007259-PA
Anopheles darlingi ADARL 9 ADAC000476-PA, ADAC000482-PA, ADAC000475-PA, ADAC001177-PA, ADAC000483-PA, ADAC004186-PA, ADAC004187-PA, ADAC007437-PA, ADAC001728-PA
Drosophila willistoni DWILL 10 FBpp0379564, FBpp0241340, FBpp0241338, FBpp0241344, FBpp0241341, FBpp0240026, FBpp0240027, FBpp0373696, FBpp0241343, FBpp0240028
Drosophila pseudoobscura DPSEU 10 FBpp0283369, FBpp0283366, FBpp0282666, FBpp0283371, FBpp0282664, FBpp0282665, FBpp0279639, FBpp0283370, FBpp0283367, FBpp0283368
Drosophila persimilis DPERS 11 FBpp0191379, FBpp0191383, FBpp0191321, FBpp0191384, FBpp0191320, FBpp0191323, FBpp0191380, FBpp0191381, FBpp0191378, FBpp0191322, FBpp0191382
Drosophila ananassae DANAN 9 FBpp0120324, FBpp0121055, FBpp0120321, FBpp0120325, FBpp0121053, FBpp0120323, FBpp0123095, FBpp0121054, FBpp0120322
Drosophila melanogaster DMELA 9 FBpp0082845, FBpp0082859, FBpp0082846, FBpp0082858, FBpp0112313, FBpp0082847, FBpp0292474, FBpp0082843, FBpp0289337
Drosophila sechellia DSECH 9 FBpp0196860, FBpp0196688, FBpp0196861, FBpp0196689, FBpp0196692, FBpp0196686, FBpp0196859, FBpp0196690, FBpp0196687
Drosophila simulans DSIMU 9 FBpp0218650, FBpp0217546, FBpp0218651, FBpp0217543, FBpp0217547, FBpp0218652, FBpp0217542, FBpp0321989, FBpp0217545
Drosophila erecta DEREC 9 FBpp0140617, FBpp0135336, FBpp0140607, FBpp0135335, FBpp0140563, FBpp0140574, FBpp0140596, FBpp0140585, FBpp0135337
Drosophila yakuba DYAKU 9 FBpp0269625, FBpp0255123, FBpp0271115, FBpp0255121, FBpp0255122, FBpp0271116, FBpp0269624, FBpp0269623, FBpp0271114
Drosophila virilis DVIRI 8 FBpp0225131, FBpp0225135, FBpp0224864, FBpp0225132, FBpp0225136, FBpp0224862, FBpp0225134, FBpp0224863
Drosophila mojavensis DMOJA 8 FBpp0172361, FBpp0172359, FBpp0173658, FBpp0172362, FBpp0173657, FBpp0173655, FBpp0173659, FBpp0173656
Drosophila grimshawi DGRIM 8 FBpp0408797, FBpp0147973, FBpp0147969, FBpp0148159, FBpp0147968, FBpp0147972, FBpp0147970, FBpp0148158
Lucilia cuprina LCUPR 7 KNC34044, KNC34034, KNC34045, KNC34039, KNC34038, KNC34037, KNC34036
Musca domestica MDOME 11 MDOA001659-PA, MDOA004980-PB, MDOA006368-PA, MDOA005142-PA, MDOA001474-PB, MDOA002596-PA, MDOA016775-PA, MDOA006952-PA, MDOA011439-PA, MDOA007007-PA, MDOA011745-PA
Stomoxys calcitrans SCALC 8 SCAU005527-PA, SCAU004275-PA, SCAU008307-PA, SCAU014299-PA, SCAU011829-PA, SCAU012368-PA, SCAU000166-PA, SCAU007204-PA
Glossina brevipalpis GBREV 6 GBRI043423-PA, GBRI043422-PA, GBRI043420-PA, GBRI043424-PA, GBRI043421-PA, GBRI043427-PA
Glossina palpalis GPALP 2 GPPI038601-PA, GPPI038603-PA
Glossina austeni GAUST 6 GAUT027438-PA, GAUT027439-PA, GAUT027436-PA, GAUT027437-PA, GAUT027435-PA, GAUT027440-PA
Glossina pallidipes GPALL 5 GPAI014732-PA, GPAI014734-PA, GPAI014735-PA, GPAI014724-PA, GPAI014733-PA
Glossina morsitans GMORS 1 GMOY007343-PA

Gene tree

Chironomidae-wide analysis

The Orthogroup for the longest transcript (g11168.t1) is OG0002407. Other genes in this orthogroup contains the following. [This data uses ab initio gene models predicted in Yoshida et al 2022, so most genes are not registered in public databases. Please contact the authors for more information on these data.]

Conservation

Organism Abb. ID Ortholog ID
Podonomus sp PODON TRINITY_DN4503_c0_g2_i6.p1
Parochlus steinenii PSTEI none
Trissopelopia nemorum TNEMO TRINITY_DN43161_c0_g1_i2.p1
Paraheptagyia tonnoiri PTONN TRINITY_DN0_c797_g1_i1.p1, TRINITY_DN1027_c0_g1_i12.p1, TRINITY_DN25992_c0_g1_i1.p1
Telmatogeton pecinata TPECI TRINITY_DN63332_c0_g1_i1.p2, TRINITY_DN0_c9757_g1_i1.p2
Cricotopus draysoni CDRAY TRINITY_DN48967_c0_g1_i1.p2, TRINITY_DN25709_c0_g1_i1.p1, TRINITY_DN2136_c0_g1_i1.p1
Clunio marinus CMARI CRK91346.1
Cardiocladius sp CARDI TRINITY_DN2011_c0_g1_i2.p1
Belgica antarctica BANTA IU25_08729-mRNA-1
Kiefferophyes invenustulus KINVE TRINITY_DN47361_c0_g1_i1.p1, TRINITY_DN4522_c0_g5_i1.p1, TRINITY_DN4522_c0_g2_i2.p1
Chironomus riparius CRIPA g3139.t1
Chironomus columbiensis CCOLU TRINITY_DN59389_c0_g1_i1.p1
Chironomus tentans CTENT g4253.t1
Chironomus dilutus CDILU none
Polypedilum nubifer PNUBI none
Polypedilum vanderplanki PVAND g11168.t1
Polypedilum pembai PPEMB g2654.t1
Culicoides sonorensis CSONO CSON008302-1, CSON009526-1, CSON009345-1, CSON009338-1
Aedes aegypti lvpagwg AAEGYL AAEL002360-PB, AAEL024934-PA, AAEL022646-PA, AAEL002347-PA, AAEL015294-PA
Anopheles gambiae AGAMB AGAP007142-PA, AGAP006710-PA, AGAP005194-PA, AGAP007141-PA, AGAP006709-PA, AGAP006711-PA, AGAP006707-PA

Gene tree

Expression profile for this gene

Gene-level expression profile

Raw TPM values

Expression profile of isoforms

A heatmap representing isoforms with TPM > 0 in at least one sample. Expression profiles were are clustered based on the spearman correlation