Gene loci information

Isoforms of this gene

  • There are 1 isoforms that are expressed from this gene.
  • The longest transcript is g9355.t1
  • List of isoforms

g9355.t1

The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively.

KEGG

Orthology

This gene did not have any KEGG Ortholog annotations (KAAS, GHOSTZ).

Gene conservation patterns

Diptera wide analysis

The Orthogroup for the longest transcript (g9355.t1) is OG0000021. Other genes in this orthogroup contains the following. This list is ordered by phylogeny determined by OrthoFinder analysis. Genes from ENSEMBL are linked to their corresponding pages. For P. nubifer and P. vanderplanki, they are linked to the Midgebase1 and Midgebase2 pages.

Conservation

Organism Abb. ID No. Orthologs Ortholog ID
Atta cephalotes ACEPH 5 XP_012062822.1, XP_012056936.1, XP_012062833.1, XP_012056862.1, XP_012056859.1
Apis mellifera AMELL 4 GB55007-PA, GB49440-PA, GB50164-PA, GB49441-PA
Culicoides sonorensis CSONO 12 CSON005854-1, CSON005852-1, CSON010664-1, CSON009877-1, CSON014111-1, CSON011833-1, CSON008292-1, CSON011813-1, CSON007921-1, CSON006259-1, CSON012105-1, CSON002839-1
Polypedilum nubifer PNUBI 9 Pn.16250, Pn.05613, Pn.03051, Pn.09918, Pn.09915, Pn.07092, Pn.16249, Pn.13522, Pn.03050
Polypedilum vanderplanki PVAND 11 g5458.t1, g1302.t1, g305.t1, g9355.t1, g5534.t1, g7450.t1, g14587.t1, g5463.t1, g13907.t12, g308.t1, g3236.t1
Polypedilum pembai PPEMB 10 g4541.t1, g4367.t1, g3729.t1, g6612.t1, g3354.t1, g9388.t1, g4540.t1, g7478.t1, g9525.t1, g5321.t1
Belgica antarctica BANTA 16 IU25_11259-mRNA-1, IU25_11066-mRNA-1, IU25_00570-mRNA-1, IU25_08947-mRNA-1, IU25_11200-mRNA-1, IU25_12735-mRNA-1, IU25_05842-mRNA-1, IU25_08416-mRNA-1, IU25_00447-mRNA-1, IU25_12100-mRNA-1, IU25_11258-mRNA-1, IU25_04025-mRNA-1, IU25_11694-mRNA-1, IU25_09578-mRNA-1, IU25_12101-mRNA-1, IU25_02402-mRNA-1
Clunio marinus CMARI 6 CRK87165.1, CRL05183.1, CRK99977.1, CRK97011.1, CRL01015.1, CRK92188.1
Aedes aegypti lvpagwg AAEGYL 18 AAEL026876-PA, AAEL007597-PA, AAEL005753-PA, AAEL004524-PA, AAEL020470-PA, AAEL012711-PB, AAEL007593-PA, AAEL007969-PC, AAEL011593-PA, AAEL002273-PB, AAEL011624-PB, AAEL021678-PA, AAEL010866-PA, AAEL012713-PA, AAEL010867-PA, AAEL011991-PB, AAEL019853-PA, AAEL008003-PA
Culex quinquefasciatus quinquefasciatus CQUINQ 25 EDS36675.1, EDS29727.1, EDS39968.1, EDS26916.1, EDS42286.1, EDS26919.1, EDS33279.1, EDS42284.1, EDS29725.1, EDS43774.1, EDS34246.1, EDS33280.1, EDS44979.1, EDS26920.1, EDS26918.1, EDS36674.1, EDS29726.1, EDS42283.1, EDS42285.1, EDS36676.1, EDS26917.1, EDS26915.1, EDS29728.1, EDS36677.1, EDS44749.1
Culex quinquefasciatus CQUIN 25 CPIJ020281-PA, CPIJ018034-PA, CPIJ018033-PA, CPIJ019031-PA, CPIJ019030-PA, CPIJ002754-PA, CPIJ002753-PA, CPIJ019032-PA, CPIJ002752-PA, CPIJ019033-PA, CPIJ003719-PA, CPIJ002751-PA, CPIJ000870-PA, CPIJ009112-PA, CPIJ009113-PA, CPIJ018037-PA, CPIJ018035-PA, CPIJ014649-PA, CPIJ014650-PA, CPIJ018032-PA, CPIJ014652-PA, CPIJ016831-PA, CPIJ018036-PA, CPIJ014651-PA, CPIJ016080-PA
Anopheles atroparvus AATRO 12 AATE016725-PA, AATE011685-PA, AATE010152-PA, AATE019421-PA, AATE005899-PA, AATE005862-PA, AATE013828-PA, AATE017880-PA, AATE018587-PA, AATE005950-PA, AATE006822-PA, AATE014228-PA
Anopheles sinensis china ASINEC 22 ASIC005431-PA, ASIC012560-PA, ASIC009812-PA, ASIC003919-PA, ASIC001352-PA, ASIC009810-PA, ASIC005430-PA, ASIC002914-PA, ASIC003920-PA, ASIC003921-PA, ASIC009407-PA, ASIC013935-PA, ASIC010670-PA, ASIC001385-PA, ASIC009813-PA, ASIC001384-PA, ASIC009809-PA, ASIC009814-PA, ASIC013922-PA, ASIC005432-PA, ASIC005429-PA, ASIC005664-PA
Anopheles dirus ADIRU 6 ADIR003468-PA, ADIR015525-PA, ADIR011677-PA, ADIR002900-PA, ADIR002901-PA, ADIR003197-PA
Anopheles farauti AFARA 12 AFAF005640-PA, AFAF020646-PA, AFAF015131-PA, AFAF002929-PA, AFAF004503-PA, AFAF000342-PA, AFAF004202-PA, AFAF014876-PA, AFAF000425-PA, AFAF017692-PA, AFAF000559-PA, AFAF003860-PA
Anopheles epiroticus AEPIR 6 AEPI009086-PA, AEPI008129-PA, AEPI003402-PA, AEPI009979-PA, AEPI003954-PA, AEPI003953-PA
Anopheles christyi ACHRI 7 ACHR009321-PA, ACHR000127-PA, ACHR009389-PA, ACHR000730-PA, ACHR003966-PA, ACHR000128-PA, ACHR007554-PA
Anopheles merus AMERU 10 AMEM006344-PA, AMEM018203-PA, AMEM005844-PA, AMEM002386-PA, AMEM016668-PA, AMEM012244-PA, AMEM014062-PA, AMEM009182-PA, AMEM002475-PA, AMEM000602-PA
Anopheles melas AMELA 11 AMEC004570-PA, AMEC002390-PA, AMEC005175-PA, AMEC019637-PA, AMEC013725-PA, AMEC000237-PA, AMEC019544-PA, AMEC014295-PA, AMEC010013-PA, AMEC021764-PA, AMEC003757-PA
Anopheles arabiensis AARAB 10 AARA017453-PA, AARA017454-PA, AARA011483-PA, AARA015814-PA, AARA011484-PA, AARA004664-PA, AARA017469-PA, AARA017470-PA, AARA017472-PA, AARA010168-PA
Anopheles coluzzii ACOLU 8 ACOM029206-PA, ACOM037589-PA, ACOM032989-PA, ACOM033521-PA, ACOM032988-PA, ACOM028694-PA, ACOM028695-PA, ACOM024361-PA
Anopheles coluzzii ngousso ACOLUN 10 ACON004317-PA, ACON000572-PA, ACON000315-PA, ACON004318-PA, ACON002842-PA, ACON008835-PA, ACON013221-PA, ACON012946-PA, ACON000571-PA, ACON003627-PA
Anopheles gambiae AGAMB 10 AGAP000571-PA, AGAP004318-PA, AGAP004317-PA, AGAP000572-PA, AGAP012946-PA, AGAP000315-PA, AGAP008835-PA, AGAP003627-PA, AGAP013221-PA, AGAP002842-PA
Anopheles quadriannulatus AQUAD 9 AQUA006219-PA, AQUA016798-PA, AQUA016049-PA, AQUA010797-PA, AQUA006220-PA, AQUA010796-PA, AQUA001584-PA, AQUA016799-PA, AQUA009354-PA
Anopheles minimus AMINI 5 AMIN015660-PA, AMIN005324-PA, AMIN002983-PA, AMIN002797-PA, AMIN003233-PA
Anopheles culicifacies ACULI 11 ACUA026447-PA, ACUA016339-PA, ACUA009379-PA, ACUA008264-PA, ACUA015518-PA, ACUA005095-PA, ACUA012445-PA, ACUA002078-PA, ACUA024376-PA, ACUA000096-PA, ACUA023869-PA
Anopheles funestus AFUNE 14 AFUN022135-PA, AFUN019694-PA, AFUN022134-PA, AFUN019468-PA, AFUN008344-PA, AFUN021340-PA, AFUN019229-PA, AFUN016393-PA, AFUN019506-PA, AFUN016392-PA, AFUN015877-PA, AFUN022137-PA, AFUN021339-PA, AFUN019241-PA
Anopheles stephensi indian ASTEPI 6 ASTEI04413-PA, ASTEI00662-PA, ASTEI08199-PA, ASTEI05018-PA, ASTEI08200-PA, ASTEI00442-PA
Anopheles stephensi ASTEP 8 ASTE004200-PA, ASTE015923-PA, ASTE000863-PA, ASTE005297-PA, ASTE005300-PA, ASTE005299-PA, ASTE000864-PA, ASTE001196-PA
Anopheles albimanus AALBI 6 AALB006821-PA, AALB015566-PA, AALB009042-PA, AALB015567-PA, AALB009040-PA, AALB015569-PA
Anopheles darlingi ADARL 9 ADAC000505-PA, ADAC000507-PA, ADAC004839-PA, ADAC004841-PA, ADAC002532-PA, ADAC000506-PA, ADAC000504-PA, ADAC004341-PA, ADAC004338-PA
Drosophila willistoni DWILL 12 FBpp0379741, FBpp0245943, FBpp0380067, FBpp0251712, FBpp0254403, FBpp0379764, FBpp0251711, FBpp0239996, FBpp0249935, FBpp0375504, FBpp0377306, FBpp0374670
Drosophila pseudoobscura DPSEU 11 FBpp0278673, FBpp0284631, FBpp0292657, FBpp0282100, FBpp0283760, FBpp0282101, FBpp0332966, FBpp0272215, FBpp0282099, FBpp0275977, FBpp0330002
Drosophila persimilis DPERS 11 FBpp0187254, FBpp0178752, FBpp0188358, FBpp0181390, FBpp0188359, FBpp0178753, FBpp0188361, FBpp0191139, FBpp0188493, FBpp0174242, FBpp0176443
Drosophila ananassae DANAN 12 FBpp0347028, FBpp0347623, FBpp0120017, FBpp0116746, FBpp0124923, FBpp0119466, FBpp0114587, FBpp0119464, FBpp0345662, FBpp0124925, FBpp0119465, FBpp0342181
Drosophila melanogaster DMELA 11 FBpp0423257, FBpp0084731, FBpp0084730, FBpp0071815, FBpp0074400, FBpp0088629, FBpp0099998, FBpp0111913, FBpp0071174, FBpp0082184, FBpp0084732
Drosophila sechellia DSECH 14 FBpp0207440, FBpp0204290, FBpp0194237, FBpp0205558, FBpp0204291, FBpp0196720, FBpp0208011, FBpp0194235, FBpp0192198, FBpp0194239, FBpp0203186, FBpp0194238, FBpp0197447, FBpp0202691
Drosophila simulans DSIMU 14 FBpp0209608, FBpp0314559, FBpp0325133, FBpp0219809, FBpp0218925, FBpp0325403, FBpp0314045, FBpp0222328, FBpp0313390, FBpp0323293, FBpp0316107, FBpp0210124, FBpp0219444, FBpp0321799
Drosophila erecta DEREC 14 FBpp0368832, FBpp0135626, FBpp0141359, FBpp0142429, FBpp0137583, FBpp0130298, FBpp0129778, FBpp0139160, FBpp0130182, FBpp0130184, FBpp0370592, FBpp0130185, FBpp0370708, FBpp0369650
Drosophila yakuba DYAKU 12 FBpp0268836, FBpp0268839, FBpp0363841, FBpp0260536, FBpp0363506, FBpp0268838, FBpp0356473, FBpp0354902, FBpp0259257, FBpp0256814, FBpp0268840, FBpp0262453
Drosophila virilis DVIRI 10 FBpp0236648, FBpp0224953, FBpp0399683, FBpp0224954, FBpp0395757, FBpp0228710, FBpp0401078, FBpp0224952, FBpp0394492, FBpp0399247
Drosophila mojavensis DMOJA 10 FBpp0173405, FBpp0382771, FBpp0173406, FBpp0169690, FBpp0171151, FBpp0380644, FBpp0380325, FBpp0164571, FBpp0168317, FBpp0164445
Drosophila grimshawi DGRIM 10 FBpp0418142, FBpp0408017, FBpp0155772, FBpp0155182, FBpp0418039, FBpp0413401, FBpp0403456, FBpp0152585, FBpp0403730, FBpp0404993
Lucilia cuprina LCUPR 7 KNC33136, KNC32438, KNC32441, KNC24484, KNC33159, KNC30167, KNC30172
Musca domestica MDOME 16 MDOA011101-PA, MDOA016367-PA, MDOA014219-PB, MDOA002879-PB, MDOA010940-PA, MDOA015135-PA, MDOA001390-PB, MDOA006684-PA, MDOA006454-PA, MDOA015900-PA, MDOA013532-PA, MDOA002144-PA, MDOA006445-PB, MDOA015886-PA, MDOA011712-PA, MDOA005035-PA
Stomoxys calcitrans SCALC 8 SCAU006186-PA, SCAU006099-PA, SCAU002882-PB, SCAU010385-PB, SCAU002551-PA, SCAU002773-PA, SCAU012213-PA, SCAU004689-PA
Glossina brevipalpis GBREV 4 GBRI004635-PA, GBRI012464-PA, GBRI028418-PA, GBRI021872-PA
Glossina palpalis GPALP 5 GPPI047134-PA, GPPI014361-PA, GPPI035759-PA, GPPI044478-PA, GPPI035724-PA
Glossina austeni GAUST 5 GAUT000973-PA, GAUT000264-PA, GAUT006379-PA, GAUT032320-PA, GAUT033534-PA
Glossina pallidipes GPALL 7 GPAI014909-PA, GPAI033254-PA, GPAI024225-PA, GPAI020707-PA, GPAI038389-PA, GPAI006275-PA, GPAI014863-PA
Glossina morsitans GMORS 5 GMOY011428-PA, GMOY000467-PA, GMOY010768-PA, GMOY008710-PA, GMOY005029-PA

Gene tree

Chironomidae-wide analysis

The Orthogroup for the longest transcript (g9355.t1) is OG0007149. Other genes in this orthogroup contains the following. [This data uses ab initio gene models predicted in Yoshida et al 2022, so most genes are not registered in public databases. Please contact the authors for more information on these data.]

Conservation

Organism Abb. ID Ortholog ID
Podonomus sp PODON none
Parochlus steinenii PSTEI PSG04745
Trissopelopia nemorum TNEMO none
Paraheptagyia tonnoiri PTONN none
Telmatogeton pecinata TPECI TRINITY_DN0_c7931_g1_i2.p1, TRINITY_DN0_c1011_g1_i1.p1, TRINITY_DN2906_c0_g4_i2.p1, TRINITY_DN5744_c0_g1_i1.p2, TRINITY_DN2906_c0_g5_i3.p1, TRINITY_DN65000_c0_g1_i1.p1, TRINITY_DN0_c12826_g1_i1.p1
Cricotopus draysoni CDRAY none
Clunio marinus CMARI CRK97011.1
Cardiocladius sp CARDI none
Belgica antarctica BANTA IU25_00447-mRNA-1
Kiefferophyes invenustulus KINVE TRINITY_DN280641_c0_g1_i1.p1, TRINITY_DN177973_c0_g1_i1.p1, TRINITY_DN471_c0_g1_i5.p1
Chironomus riparius CRIPA g4515.t1
Chironomus columbiensis CCOLU none
Chironomus tentans CTENT g5520.t1
Chironomus dilutus CDILU TRINITY_DN12540_c0_g1_i1.p1, TRINITY_DN5267_c0_g1_i2.p1
Polypedilum nubifer PNUBI Pn.10747
Polypedilum vanderplanki PVAND g9355.t1
Polypedilum pembai PPEMB g5321.t1
Culicoides sonorensis CSONO CSON006259-1, CSON008292-1
Aedes aegypti lvpagwg AAEGYL AAEL020470-PA
Anopheles gambiae AGAMB none

Gene tree

Expression profile for this gene

Gene-level expression profile

Raw TPM values

Expression profile of isoforms

A heatmap representing isoforms with TPM > 0 in at least one sample. Expression profiles were are clustered based on the spearman correlation