Gene loci information

Isoforms of this gene

  • There are 1 isoforms that are expressed from this gene.
  • The longest transcript is g2513.t1
  • List of isoforms

g2513.t1

The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively.

KEGG

Orthology

Pathway

This gene does not belong to any pathways.

Gene conservation patterns

Diptera wide analysis

The Orthogroup for the longest transcript (g2513.t1) is OG0000006. Other genes in this orthogroup contains the following. This list is ordered by phylogeny determined by OrthoFinder analysis. Genes from ENSEMBL are linked to their corresponding pages. For P. nubifer and P. vanderplanki, they are linked to the Midgebase1 and Midgebase2 pages.

Conservation

Organism Abb. ID No. Orthologs Ortholog ID
Atta cephalotes ACEPH 9 XP_012062915.1, XP_012064030.1, XP_012054931.1, XP_012061597.1, XP_012063191.1, XP_012064251.1, XP_012060330.1, XP_012062914.1, XP_012062913.1
Apis mellifera AMELL 1 GB44513-PA
Culicoides sonorensis CSONO 16 CSON000502-1, CSON002274-1, CSON009394-1, CSON007612-1, CSON009398-1, CSON009392-1, CSON004226-2, CSON004188-1, CSON009393-1, CSON004758-1, CSON002673-1, CSON009389-1, CSON004759-2, CSON000500-1, CSON009396-1, CSON009395-1
Polypedilum nubifer PNUBI 13 Pn.01675, Pn.16658, Pn.05621, Pn.13294, Pn.13159, Pn.16660, Pn.16659, Pn.16656, Pn.16657, Pn.05622, Pn.00325, Pn.01676, Pn.05620
Polypedilum vanderplanki PVAND 13 g12530.t1, g9361.t1, g15085.t15, g571.t1, g4831.t1, g573.t1, g15086.t1, g15083.t1, g44.t1, g572.t1, g2513.t1, g8132.t1, g570.t1
Polypedilum pembai PPEMB 8 g7629.t1, g6746.t1, g9156.t1, g2774.t1, g4956.t1, g14463.t1, g688.t1, g14061.t1
Belgica antarctica BANTA 12 IU25_12631-mRNA-1, IU25_12126-mRNA-1, IU25_10224-mRNA-1, IU25_06888-mRNA-1, IU25_01700-mRNA-1, IU25_06887-mRNA-1, IU25_04632-mRNA-1, IU25_03429-mRNA-1, IU25_12632-mRNA-1, IU25_07128-mRNA-1, IU25_10223-mRNA-1, IU25_10977-mRNA-1
Clunio marinus CMARI 10 CRL07638.1, CRL05138.1, CRK95471.1, CRK94499.1, CRK96913.1, CRK92923.1, CRK95270.1, CRK93462.1, CRK94498.1, CRK87592.1
Aedes aegypti lvpagwg AAEGYL 17 AAEL008017-PA, AAEL008018-PA, AAEL007795-PA, AAEL007815-PB, AAEL007807-PA, AAEL025214-PA, AAEL010154-PA, AAEL002085-PA, AAEL007830-PA, AAEL007812-PA, AAEL003380-PA, AAEL007798-PA, AAEL003399-PB, AAEL012266-PA, AAEL013798-PA, AAEL007808-PA, AAEL007816-PA
Culex quinquefasciatus quinquefasciatus CQUINQ 28 EDS35553.1, EDS30083.1, EDS33500.1, EDS33498.1, EDS41032.1, EDS33573.1, EDS33571.1, EDS33492.1, EDS45242.1, EDS43172.1, EDS27974.1, EDS28996.1, EDS29636.1, EDS33837.1, EDS33499.1, EDS33785.1, EDS28597.1, EDS32643.1, EDS33501.1, EDS33496.1, EDS33874.1, EDS33572.1, EDS28598.1, EDS32953.1, EDS33497.1, EDS33491.1, EDS30002.1, EDS32954.1
Culex quinquefasciatus CQUIN 28 CPIJ014579-PA, CPIJ001758-PA, CPIJ009468-PA, CPIJ011127-PA, CPIJ001759-PA, CPIJ017351-PA, CPIJ018716-PA, CPIJ009477-PA, CPIJ001757-PA, CPIJ010075-PA, CPIJ018944-PA, CPIJ018854-PA, CPIJ018943-PA, CPIJ001886-PA, CPIJ008937-PA, CPIJ019395-PA, CPIJ007188-PA, CPIJ009476-PA, CPIJ015681-PA, CPIJ009478-PA, CPIJ009469-PA, CPIJ006721-PA, CPIJ009475-PA, CPIJ009474-PA, CPIJ008936-PA, CPIJ009473-PA, CPIJ020229-PA, CPIJ001810-PA
Anopheles atroparvus AATRO 21 AATE021055-PA, AATE016794-PA, AATE011939-PA, AATE002634-PA, AATE007038-PA, AATE016938-PA, AATE016735-PA, AATE018000-PA, AATE020595-PA, AATE011158-PA, AATE020058-PA, AATE001120-PA, AATE003744-PA, AATE008636-PA, AATE003150-PA, AATE011331-PA, AATE014765-PA, AATE006632-PA, AATE011027-PA, AATE019177-PA, AATE009650-PA
Anopheles sinensis china ASINEC 17 ASIC008292-PA, ASIC020384-PA, ASIC020379-PA, ASIC008421-PA, ASIC008420-PA, ASIC017734-PA, ASIC020381-PA, ASIC008419-PA, ASIC013586-PA, ASIC008283-PA, ASIC020380-PA, ASIC008295-PA, ASIC008422-PA, ASIC008424-PA, ASIC008294-PA, ASIC008426-PA, ASIC017741-PA
Anopheles dirus ADIRU 15 ADIR004529-PA, ADIR004532-PA, ADIR002693-PA, ADIR011116-PA, ADIR001509-PA, ADIR005706-PA, ADIR009841-PA, ADIR000582-PA, ADIR002690-PA, ADIR011119-PA, ADIR001093-PA, ADIR001510-PA, ADIR011120-PA, ADIR000585-PA, ADIR000586-PA
Anopheles farauti AFARA 19 AFAF018421-PA, AFAF014260-PA, AFAF000728-PA, AFAF000938-PA, AFAF002163-PA, AFAF008312-PA, AFAF000611-PA, AFAF008617-PA, AFAF004837-PA, AFAF002114-PA, AFAF020273-PA, AFAF005533-PA, AFAF013994-PA, AFAF003854-PA, AFAF017686-PA, AFAF004056-PA, AFAF012411-PA, AFAF001107-PA, AFAF016284-PA
Anopheles epiroticus AEPIR 23 AEPI015081-PA, AEPI015178-PA, AEPI015103-PA, AEPI007869-PA, AEPI002719-PA, AEPI015179-PA, AEPI010307-PA, AEPI015177-PA, AEPI005226-PA, AEPI005225-PA, AEPI005229-PA, AEPI015078-PA, AEPI015079-PA, AEPI015176-PA, AEPI007868-PA, AEPI015080-PA, AEPI015057-PA, AEPI007398-PA, AEPI015148-PA, AEPI005458-PA, AEPI015149-PA, AEPI002891-PA, AEPI015058-PA
Anopheles christyi ACHRI 16 ACHR005117-PA, ACHR006846-PA, ACHR006602-PA, ACHR008032-PA, ACHR010142-PA, ACHR008850-PA, ACHR008813-PA, ACHR009444-PA, ACHR007450-PA, ACHR006601-PA, ACHR009621-PA, ACHR005187-PA, ACHR005765-PA, ACHR006129-PA, ACHR007618-PA, ACHR005726-PA
Anopheles merus AMERU 23 AMEM019013-PA, AMEM019012-PA, AMEM008169-PA, AMEM019016-PA, AMEM019000-PA, AMEM005954-PA, AMEM005986-PA, AMEM009891-PA, AMEM007518-PA, AMEM000940-PA, AMEM001419-PA, AMEM019008-PA, AMEM018397-PA, AMEM004785-PA, AMEM014091-PA, AMEM006673-PA, AMEM019001-PA, AMEM013650-PA, AMEM014051-PA, AMEM009618-PA, AMEM000643-PA, AMEM010277-PA, AMEM015130-PA
Anopheles melas AMELA 24 AMEC021647-PA, AMEC008909-PA, AMEC002022-PA, AMEC000829-PA, AMEC011834-PA, AMEC008557-PA, AMEC014612-PA, AMEC012082-PA, AMEC007818-PA, AMEC000649-PA, AMEC010258-PA, AMEC001295-PA, AMEC002519-PA, AMEC021655-PA, AMEC021315-PA, AMEC014887-PA, AMEC004364-PA, AMEC019857-PA, AMEC020523-PA, AMEC017546-PA, AMEC020984-PA, AMEC006086-PA, AMEC004952-PA, AMEC013437-PA
Anopheles arabiensis AARAB 24 AARA015634-PA, AARA005902-PA, AARA016565-PA, AARA015844-PA, AARA015647-PA, AARA015670-PA, AARA008772-PA, AARA007065-PA, AARA008776-PA, AARA016564-PA, AARA000970-PA, AARA004459-PA, AARA015676-PA, AARA004460-PA, AARA015646-PA, AARA015633-PA, AARA011200-PA, AARA011204-PA, AARA015845-PA, AARA015675-PA, AARA015669-PA, AARA008771-PA, AARA011201-PA, AARA015635-PA
Anopheles coluzzii ACOLU 24 ACOM037044-PA, ACOM030091-PA, ACOM037029-PA, ACOM022664-PA, ACOM027035-PA, ACOM023722-PA, ACOM023305-PA, ACOM023721-PA, ACOM030084-PA, ACOM023290-PA, ACOM040856-PA, ACOM030083-PA, ACOM023291-PA, ACOM037040-PA, ACOM029814-PA, ACOM037038-PA, ACOM023731-PA, ACOM029815-PA, ACOM023293-PA, ACOM022665-PA, ACOM037047-PA, ACOM037043-PA, ACOM027026-PA, ACOM027034-PA
Anopheles coluzzii ngousso ACOLUN 24 ACON013490-PA, ACON000088-PA, ACON002418-PA, ACON002419-PA, ACON000193-PA, ACON008552-PA, ACON009246-PA, ACON013305-PA, ACON010414-PA, ACON012957-PA, ACON008358-PA, ACON000192-PA, ACON002417-PA, ACON028019-PA, ACON008356-PA, ACON000194-PA, ACON013224-PA, ACON009241-PA, ACON008553-PA, ACON009240-PA, ACON002416-PA, ACON013241-PA, ACON001861-PA, ACON001864-PA
Anopheles gambiae AGAMB 24 AGAP009240-PA, AGAP002418-PA, AGAP000193-PA, AGAP000192-PA, AGAP008552-PA, AGAP009241-PA, AGAP001864-PA, AGAP012957-PA, AGAP000194-PA, AGAP013490-PA, AGAP013224-PA, AGAP008356-PA, AGAP013241-PA, AGAP009246-PA, AGAP002417-PA, AGAP008358-PA, AGAP010414-PA, AGAP002416-PA, AGAP028019-PA, AGAP001861-PA, AGAP008553-PA, AGAP000088-PA, AGAP002419-PA, AGAP013305-PA
Anopheles quadriannulatus AQUAD 25 AQUA015942-PA, AQUA015936-PA, AQUA008759-PA, AQUA015931-PA, AQUA010461-PA, AQUA007243-PA, AQUA015930-PA, AQUA008756-PA, AQUA015955-PA, AQUA005942-PA, AQUA015944-PA, AQUA010464-PA, AQUA000241-PA, AQUA005941-PA, AQUA009547-PA, AQUA016020-PA, AQUA015956-PA, AQUA015943-PA, AQUA010465-PA, AQUA016019-PA, AQUA008755-PA, AQUA005943-PA, AQUA015941-PA, AQUA006998-PA, AQUA015932-PA
Anopheles minimus AMINI 14 AMIN005409-PA, AMIN004970-PA, AMIN001693-PA, AMIN002682-PA, AMIN005052-PA, AMIN001694-PA, AMIN000434-PA, AMIN005941-PA, AMIN000436-PA, AMIN002680-PA, AMIN001697-PA, AMIN002681-PA, AMIN005942-PA, AMIN005945-PA
Anopheles culicifacies ACULI 21 ACUA005344-PA, ACUA004954-PA, ACUA021027-PA, ACUA019305-PA, ACUA024337-PA, ACUA009755-PA, ACUA009069-PA, ACUA021712-PA, ACUA019998-PA, ACUA000066-PA, ACUA006381-PA, ACUA004783-PA, ACUA011158-PA, ACUA006583-PA, ACUA016998-PA, ACUA021573-PA, ACUA014819-PA, ACUA024801-PA, ACUA016920-PA, ACUA012435-PA, ACUA005264-PA
Anopheles funestus AFUNE 24 AFUN015993-PA, AFUN015992-PA, AFUN021098-PA, AFUN020179-PA, AFUN015895-PA, AFUN015778-PA, AFUN004315-PA, AFUN005865-PA, AFUN006135-PA, AFUN003690-PA, AFUN004312-PA, AFUN015894-PA, AFUN004316-PA, AFUN006122-PA, AFUN008841-PA, AFUN018937-PA, AFUN015990-PA, AFUN002128-PA, AFUN019426-PA, AFUN015991-PA, AFUN015777-PA, AFUN021097-PA, AFUN019567-PA, AFUN005864-PA
Anopheles stephensi indian ASTEPI 14 ASTEI02927-PA, ASTEI06230-PA, ASTEI08940-PA, ASTEI06605-PA, ASTEI08755-PA, ASTEI08939-PA, ASTEI10596-PA, ASTEI08938-PA, ASTEI09473-PA, ASTEI08758-PA, ASTEI02928-PA, ASTEI06608-PA, ASTEI06609-PA, ASTEI02931-PA
Anopheles stephensi ASTEP 21 ASTE008731-PA, ASTE016005-PA, ASTE009864-PA, ASTE008575-PA, ASTE015888-PA, ASTE004400-PA, ASTE015986-PA, ASTE015985-PA, ASTE016006-PA, ASTE008686-PA, ASTE008683-PA, ASTE016004-PA, ASTE002991-PA, ASTE008730-PA, ASTE016003-PA, ASTE015889-PA, ASTE009014-PA, ASTE015910-PA, ASTE008687-PA, ASTE015894-PA, ASTE015911-PA
Anopheles albimanus AALBI 23 AALB015534-PA, AALB015507-PA, AALB015702-PA, AALB015616-PA, AALB015527-PA, AALB001472-PA, AALB015703-PA, AALB015535-PA, AALB015506-PA, AALB001475-PA, AALB015526-PA, AALB015706-PA, AALB002236-PA, AALB015537-PA, AALB001023-PA, AALB002265-PA, AALB015525-PA, AALB006878-PA, AALB015704-PA, AALB001471-PA, AALB015705-PA, AALB001020-PA, AALB015536-PA
Anopheles darlingi ADARL 21 ADAC001504-PA, ADAC008626-PA, ADAC002552-PA, ADAC003264-PA, ADAC006406-PA, ADAC002753-PA, ADAC000697-PA, ADAC000735-PA, ADAC008625-PA, ADAC000698-PA, ADAC002905-PA, ADAC003200-PA, ADAC000734-PA, ADAC002544-PA, ADAC000699-PA, ADAC002549-PA, ADAC001272-PA, ADAC002234-PA, ADAC002750-PA, ADAC002756-PA, ADAC002755-PA
Drosophila willistoni DWILL 11 FBpp0246157, FBpp0241652, FBpp0375424, FBpp0245182, FBpp0245187, FBpp0250645, FBpp0243304, FBpp0375568, FBpp0375281, FBpp0245946, FBpp0245558
Drosophila pseudoobscura DPSEU 13 FBpp0282845, FBpp0274713, FBpp0274019, FBpp0282971, FBpp0277404, FBpp0273261, FBpp0287680, FBpp0273165, FBpp0277403, FBpp0273166, FBpp0280329, FBpp0273155, FBpp0277405
Drosophila persimilis DPERS 14 FBpp0177430, FBpp0175329, FBpp0188338, FBpp0183320, FBpp0184314, FBpp0177507, FBpp0175328, FBpp0188717, FBpp0184450, FBpp0184449, FBpp0175327, FBpp0177429, FBpp0177631, FBpp0179310
Drosophila ananassae DANAN 11 FBpp0125079, FBpp0126977, FBpp0126122, FBpp0115551, FBpp0124247, FBpp0128055, FBpp0125388, FBpp0125171, FBpp0125389, FBpp0115550, FBpp0124396
Drosophila melanogaster DMELA 12 FBpp0301778, FBpp0087825, FBpp0079095, FBpp0072837, FBpp0070371, FBpp0079515, FBpp0076543, FBpp0085074, FBpp0070372, FBpp0087824, FBpp0070412, FBpp0073845
Drosophila sechellia DSECH 14 FBpp0200683, FBpp0200388, FBpp0195595, FBpp0202509, FBpp0200682, FBpp0200681, FBpp0195231, FBpp0197968, FBpp0200390, FBpp0194389, FBpp0193482, FBpp0202510, FBpp0193785, FBpp0200389
Drosophila simulans DSIMU 12 FBpp0214789, FBpp0211791, FBpp0314012, FBpp0219953, FBpp0221879, FBpp0220742, FBpp0327286, FBpp0214994, FBpp0213777, FBpp0321814, FBpp0211455, FBpp0214996
Drosophila erecta DEREC 11 FBpp0137964, FBpp0133502, FBpp0365210, FBpp0141903, FBpp0130329, FBpp0370053, FBpp0129031, FBpp0131190, FBpp0141904, FBpp0131459, FBpp0131461
Drosophila yakuba DYAKU 10 FBpp0261079, FBpp0259592, FBpp0353292, FBpp0261982, FBpp0264209, FBpp0265417, FBpp0266715, FBpp0261252, FBpp0255379, FBpp0255920
Drosophila virilis DVIRI 8 FBpp0236128, FBpp0236106, FBpp0395714, FBpp0236127, FBpp0238666, FBpp0230469, FBpp0230116, FBpp0226775
Drosophila mojavensis DMOJA 9 FBpp0167891, FBpp0161673, FBpp0161752, FBpp0171344, FBpp0170772, FBpp0167911, FBpp0389940, FBpp0381863, FBpp0165334
Drosophila grimshawi DGRIM 10 FBpp0412800, FBpp0158217, FBpp0154980, FBpp0150517, FBpp0154996, FBpp0148797, FBpp0410679, FBpp0418775, FBpp0149663, FBpp0151491
Lucilia cuprina LCUPR 7 KNC25631, KNC24818, KNC33638, KNC20997, KNC25621, KNC25618, KNC34738
Musca domestica MDOME 29 MDOA005580-PB, MDOA007797-PA, MDOA008362-PA, MDOA005025-PB, MDOA004878-PA, MDOA015235-PB, MDOA015841-PA, MDOA010150-PA, MDOA006459-PB, MDOA006302-PA, MDOA004036-PA, MDOA013427-PA, MDOA011756-PC, MDOA009445-PA, MDOA007341-PA, MDOA009727-PA, MDOA014778-PA, MDOA012699-PA, MDOA001627-PA, MDOA012339-PA, MDOA006311-PA, MDOA004488-PA, MDOA000049-PA, MDOA009233-PA, MDOA013452-PA, MDOA010231-PB, MDOA011072-PA, MDOA005978-PA, MDOA000661-PB
Stomoxys calcitrans SCALC 33 SCAU014697-PA, SCAU009789-PA, SCAU007249-PA, SCAU005933-PA, SCAU011085-PA, SCAU007728-PB, SCAU014041-PA, SCAU005447-PA, SCAU014260-PA, SCAU013524-PA, SCAU000476-PA, SCAU009711-PA, SCAU007133-PA, SCAU011047-PA, SCAU015002-PA, SCAU016146-PA, SCAU012351-PA, SCAU008472-PA, SCAU011519-PA, SCAU014054-PA, SCAU008053-PA, SCAU009677-PA, SCAU004822-PA, SCAU004022-PA, SCAU001880-PA, SCAU005601-PA, SCAU008831-PA, SCAU008473-PA, SCAU009909-PA, SCAU013104-PA, SCAU011259-PA, SCAU001116-PC, SCAU000361-PA
Glossina brevipalpis GBREV 6 GBRI010081-PA, GBRI003789-PA, GBRI003790-PA, GBRI032193-PA, GBRI003787-PA, GBRI003795-PA
Glossina palpalis GPALP 7 GPPI003673-PA, GPPI034728-PA, GPPI001178-PA, GPPI001170-PA, GPPI001179-PA, GPPI001176-PA, GPPI001175-PA
Glossina austeni GAUST 10 GAUT015389-PA, GAUT015385-PA, GAUT040666-PA, GAUT018916-PA, GAUT046239-PA, GAUT015371-PA, GAUT015384-PA, GAUT046241-PA, GAUT015387-PA, GAUT015388-PA
Glossina pallidipes GPALL 8 GPAI018389-PA, GPAI048180-PA, GPAI049225-PA, GPAI018388-PA, GPAI048179-PA, GPAI037142-PA, GPAI048178-PA, GPAI048177-PA
Glossina morsitans GMORS 9 GMOY007678-PA, GMOY004774-PA, GMOY010311-PA, GMOY006211-PA, GMOY006212-PA, GMOY006213-PA, GMOY006215-PA, GMOY003730-PA, GMOY006214-PA

Gene tree

Chironomidae-wide analysis

The Orthogroup for the longest transcript (g2513.t1) is OG0003877. Other genes in this orthogroup contains the following. [This data uses ab initio gene models predicted in Yoshida et al 2022, so most genes are not registered in public databases. Please contact the authors for more information on these data.]

Conservation

Organism Abb. ID Ortholog ID
Podonomus sp PODON TRINITY_DN1666_c4_g2_i4.p1, TRINITY_DN23814_c0_g1_i11.p1, TRINITY_DN2528_c0_g1_i6.p1
Parochlus steinenii PSTEI PSG04457
Trissopelopia nemorum TNEMO TRINITY_DN907_c0_g3_i1.p1
Paraheptagyia tonnoiri PTONN TRINITY_DN30027_c0_g1_i1.p1
Telmatogeton pecinata TPECI TRINITY_DN5827_c0_g1_i3.p1
Cricotopus draysoni CDRAY TRINITY_DN8846_c0_g1_i1.p1, TRINITY_DN11800_c0_g1_i1.p1
Clunio marinus CMARI CRL07638.1
Cardiocladius sp CARDI TRINITY_DN2029_c0_g1_i10.p1
Belgica antarctica BANTA IU25_01700-mRNA-1
Kiefferophyes invenustulus KINVE TRINITY_DN56938_c0_g1_i2.p1, TRINITY_DN9700_c0_g1_i11.p1
Chironomus riparius CRIPA g13926.t1
Chironomus columbiensis CCOLU TRINITY_DN4049_c0_g1_i1.p1
Chironomus tentans CTENT g11981.t1
Chironomus dilutus CDILU TRINITY_DN2807_c0_g1_i3.p1
Polypedilum nubifer PNUBI Pn.00325
Polypedilum vanderplanki PVAND g2513.t1
Polypedilum pembai PPEMB g4956.t1
Culicoides sonorensis CSONO CSON002274-1
Aedes aegypti lvpagwg AAEGYL AAEL012266-PA, AAEL008017-PA, AAEL008018-PA, AAEL025214-PA
Anopheles gambiae AGAMB AGAP000194-PA, AGAP000193-PA, AGAP010414-PA, AGAP000192-PA

Gene tree

Expression profile for this gene

Gene-level expression profile

Raw TPM values

Expression profile of isoforms

A heatmap representing isoforms with TPM > 0 in at least one sample. Expression profiles were are clustered based on the spearman correlation