Gene loci information

Isoforms of this gene

  • There are 2 isoforms that are expressed from this gene.
  • The longest transcript is g7689.t1
  • List of isoforms

g7689.t1, g7689.t2

The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively.

KEGG

Orthology

This gene did not have any KEGG Ortholog annotations (KAAS, GHOSTZ).

Gene conservation patterns

Diptera wide analysis

The Orthogroup for the longest transcript (g7689.t1) is OG0000184. Other genes in this orthogroup contains the following. This list is ordered by phylogeny determined by OrthoFinder analysis. Genes from ENSEMBL are linked to their corresponding pages. For P. nubifer and P. vanderplanki, they are linked to the Midgebase1 and Midgebase2 pages.

Conservation

Organism Abb. ID No. Orthologs Ortholog ID
Atta cephalotes ACEPH 1 XP_012059134.1
Apis mellifera AMELL 1 GB53848-PA
Culicoides sonorensis CSONO 5 CSON001640-1, CSON001639-1, CSON001642-1, CSON014034-1, CSON000976-1
Polypedilum nubifer PNUBI 3 Pn.12302, Pn.11712, Pn.02145
Polypedilum vanderplanki PVAND 4 g166.t1, g7689.t1, g7693.t1, g7692.t1
Polypedilum pembai PPEMB 2 g8138.t1, g7999.t1
Belgica antarctica BANTA 3 IU25_05307-mRNA-1, IU25_06486-mRNA-1, IU25_03133-mRNA-1
Clunio marinus CMARI 2 CRL06743.1, CRK88796.1
Aedes aegypti lvpagwg AAEGYL 3 AAEL003214-PA, AAEL005676-PA, AAEL026165-PA
Culex quinquefasciatus quinquefasciatus CQUINQ 3 EDS36038.1, EDS27453.1, EDS36037.1
Culex quinquefasciatus CQUIN 3 CPIJ001082-PA, CPIJ010861-PA, CPIJ010860-PA
Anopheles atroparvus AATRO 3 AATE001444-PA, AATE016789-PA, AATE006942-PA
Anopheles sinensis china ASINEC 4 ASIC018863-PA, ASIC018864-PA, ASIC010436-PA, ASIC010435-PA
Anopheles dirus ADIRU 2 ADIR004263-PA, ADIR004337-PA
Anopheles farauti AFARA 3 AFAF004074-PA, AFAF000613-PA, AFAF016048-PA
Anopheles epiroticus AEPIR 1 AEPI006779-PA
Anopheles christyi ACHRI 2 ACHR007006-PA, ACHR005028-PA
Anopheles merus AMERU 2 AMEM018237-PA, AMEM004133-PA
Anopheles melas AMELA 4 AMEC000084-PA, AMEC013417-PA, AMEC013748-PA, AMEC001725-PA
Anopheles arabiensis AARAB 3 AARA017418-PA, AARA017417-PA, AARA011455-PA
Anopheles coluzzii ACOLU 3 ACOM031546-PA, ACOM031545-PA, ACOM027801-PA
Anopheles coluzzii ngousso ACOLUN 3 ACON005283-PA, ACON006907-PA, ACON006906-PA
Anopheles gambiae AGAMB 3 AGAP006906-PA, AGAP005283-PA, AGAP006907-PA
Anopheles quadriannulatus AQUAD 2 AQUA000286-PA, AQUA001864-PA
Anopheles minimus AMINI 2 AMIN010767-PA, AMIN007685-PA
Anopheles culicifacies ACULI 3 ACUA023906-PA, ACUA022458-PA, ACUA015279-PA
Anopheles funestus AFUNE 3 AFUN018878-PA, AFUN018831-PA, AFUN008467-PA
Anopheles stephensi indian ASTEPI 3 ASTEI04589-PA, ASTEI11315-PA, ASTEI10203-PA
Anopheles stephensi ASTEP 2 ASTE011150-PA, ASTE005619-PA
Anopheles albimanus AALBI 2 AALB004394-PA, AALB004909-PA
Anopheles darlingi ADARL 2 ADAC001321-PA, ADAC001320-PA
Drosophila willistoni DWILL 5 FBpp0377518, FBpp0375012, FBpp0241471, FBpp0248665, FBpp0243337
Drosophila pseudoobscura DPSEU 5 FBpp0276791, FBpp0282288, FBpp0275040, FBpp0275039, FBpp0333409
Drosophila persimilis DPERS 6 FBpp0189327, FBpp0182181, FBpp0189328, FBpp0187191, FBpp0174742, FBpp0188557
Drosophila ananassae DANAN 8 FBpp0342180, FBpp0343088, FBpp0120069, FBpp0127084, FBpp0121341, FBpp0116715, FBpp0120068, FBpp0127085
Drosophila melanogaster DMELA 5 FBpp0082310, FBpp0082289, FBpp0074957, FBpp0074955, FBpp0086611
Drosophila sechellia DSECH 5 FBpp0205789, FBpp0205788, FBpp0207389, FBpp0205602, FBpp0201673
Drosophila simulans DSIMU 5 FBpp0224069, FBpp0217326, FBpp0210783, FBpp0210784, FBpp0218881
Drosophila erecta DEREC 5 FBpp0134333, FBpp0140956, FBpp0138339, FBpp0135574, FBpp0134334
Drosophila yakuba DYAKU 5 FBpp0354050, FBpp0267134, FBpp0257309, FBpp0271301, FBpp0267135
Drosophila virilis DVIRI 5 FBpp0228698, FBpp0228890, FBpp0235908, FBpp0227504, FBpp0227505
Drosophila mojavensis DMOJA 4 FBpp0173640, FBpp0162163, FBpp0162162, FBpp0172376
Drosophila grimshawi DGRIM 6 FBpp0420427, FBpp0413556, FBpp0156826, FBpp0148173, FBpp0414161, FBpp0149246
Lucilia cuprina LCUPR 2 KNC21374, KNC25705
Musca domestica MDOME 4 MDOA015540-PB, MDOA005874-PA, MDOA004212-PA, MDOA002981-PA
Stomoxys calcitrans SCALC 4 SCAU003423-PA, SCAU008862-PA, SCAU009852-PA, SCAU009293-PB
Glossina brevipalpis GBREV 5 GBRI015717-PA, GBRI015707-PA, GBRI015712-PA, GBRI027595-PA, GBRI015713-PA
Glossina palpalis GPALP 5 GPPI042634-PA, GPPI035844-PA, GPPI035836-PA, GPPI042635-PA, GPPI000768-PA
Glossina austeni GAUST 6 GAUT029607-PA, GAUT029604-PA, GAUT025650-PA, GAUT029599-PA, GAUT029601-PA, GAUT029600-PA
Glossina pallidipes GPALL 5 GPAI036929-PA, GPAI024635-PA, GPAI036938-PA, GPAI036934-PA, GPAI036936-PA
Glossina morsitans GMORS 6 GMOY012375-PA, GMOY012373-PA, GMOY012372-PA, GMOY010456-PA, GMOY002974-PA, GMOY012374-PA

Gene tree

Chironomidae-wide analysis

The Orthogroup for the longest transcript (g7689.t1) is OG0002131. Other genes in this orthogroup contains the following. [This data uses ab initio gene models predicted in Yoshida et al 2022, so most genes are not registered in public databases. Please contact the authors for more information on these data.]

Conservation

Organism Abb. ID Ortholog ID
Podonomus sp PODON TRINITY_DN0_c2346_g1_i1.p2, TRINITY_DN4967_c0_g1_i17.p1
Parochlus steinenii PSTEI PSG00803
Trissopelopia nemorum TNEMO TRINITY_DN8067_c0_g1_i5.p1, TRINITY_DN3805_c0_g1_i11.p1, TRINITY_DN10075_c0_g1_i3.p1, TRINITY_DN37_c0_g1_i3.p1
Paraheptagyia tonnoiri PTONN TRINITY_DN10361_c0_g1_i1.p1, TRINITY_DN6193_c0_g1_i1.p1
Telmatogeton pecinata TPECI TRINITY_DN11535_c0_g1_i3.p1, TRINITY_DN8171_c3_g1_i1.p1, TRINITY_DN11340_c0_g1_i1.p1
Cricotopus draysoni CDRAY TRINITY_DN6909_c0_g1_i1.p1
Clunio marinus CMARI CRL06743.1
Cardiocladius sp CARDI TRINITY_DN13668_c0_g1_i2.p1, TRINITY_DN3262_c0_g1_i7.p1, TRINITY_DN12705_c0_g1_i4.p1
Belgica antarctica BANTA IU25_05307-mRNA-1
Kiefferophyes invenustulus KINVE TRINITY_DN42586_c0_g1_i1.p1, TRINITY_DN22147_c0_g2_i2.p1, TRINITY_DN22147_c0_g1_i3.p1, TRINITY_DN162110_c0_g1_i1.p1
Chironomus riparius CRIPA g16475.t1
Chironomus columbiensis CCOLU TRINITY_DN6205_c0_g1_i1.p1
Chironomus tentans CTENT g11022.t1
Chironomus dilutus CDILU TRINITY_DN1502_c0_g2_i3.p1
Polypedilum nubifer PNUBI Pn.11712, Pn.02145
Polypedilum vanderplanki PVAND g7689.t1, g7693.t1, g7692.t1
Polypedilum pembai PPEMB g7999.t1
Culicoides sonorensis CSONO CSON001640-1, CSON001639-1, CSON001642-1
Aedes aegypti lvpagwg AAEGYL AAEL005676-PA, AAEL026165-PA
Anopheles gambiae AGAMB AGAP006906-PA, AGAP006907-PA

Gene tree

Expression profile for this gene

Gene-level expression profile

Raw TPM values

Expression profile of isoforms

A heatmap representing isoforms with TPM > 0 in at least one sample. Expression profiles were are clustered based on the spearman correlation