Gene loci information

Isoforms of this gene

  • There are 1 isoforms that are expressed from this gene.
  • The longest transcript is g45.t1
  • List of isoforms

g45.t1

The exon-intron structure of all isoforms are indicated below. CDS regions are colored in green. TSS and TTs that were predicted with CTR-Seq data are indicated in solid circle and squares, respectively.

KEGG

Orthology

This gene did not have any KEGG Ortholog annotations (KAAS, GHOSTZ).

Gene conservation patterns

Diptera wide analysis

The Orthogroup for the longest transcript (g45.t1) is OG0000008. Other genes in this orthogroup contains the following. This list is ordered by phylogeny determined by OrthoFinder analysis. Genes from ENSEMBL are linked to their corresponding pages. For P. nubifer and P. vanderplanki, they are linked to the Midgebase1 and Midgebase2 pages.

Conservation

Organism Abb. ID No. Orthologs Ortholog ID
Atta cephalotes ACEPH 5 XP_012060496.1, XP_012060475.1, XP_012058508.1, XP_012056174.1, XP_012062211.1
Apis mellifera AMELL 29 GB47279-PA, GB40286-PA, GB49888-PA, GB46842-PA, GB49875-PA, GB52023-PA, GB49890-PA, GB45746-PA, GB42284-PA, GB49894-PA, GB40288-PA, GB48738-PA, GB46814-PA, GB40285-PA, GB49892-PA, GB49891-PA, GB49877-PA, GB40248-PA, GB51383-PA, GB48993-PA, GB40287-PA, GB49876-PA, GB49887-PA, GB40284-PA, GB45748-PA, GB49885-PA, GB49878-PA, GB55257-PA, GB49886-PA
Culicoides sonorensis CSONO 13 CSON003753-1, CSON003181-1, CSON003273-1, CSON012846-1, CSON005506-1, CSON013847-1, CSON002647-1, CSON011992-1, CSON006989-1, CSON001397-1, CSON003180-1, CSON000236-1, CSON014287-1
Polypedilum nubifer PNUBI 25 Pn.14799, Pn.13936, Pn.16763, Pn.13160, Pn.16760, Pn.05361, Pn.04795, Pn.14798, Pn.14797, Pn.14796, Pn.13937, Pn.11078, Pn.14803, Pn.16762, Pn.01944, Pn.05707, Pn.14801, Pn.05363, Pn.13938, Pn.13939, Pn.05365, Pn.13940, Pn.05364, Pn.14800, Pn.05362
Polypedilum vanderplanki PVAND 33 g60.t1, g56.t1, g54.t1, g58.t1, g52.t1, g7567.t1, g12864.t1, g4589.t1, g50.t1, g4849.t1, g53.t1, g15289.t1, g15290.t1, g62.t1, g48.t1, g4848.t1, g61.t1, g15292.t1, g46.t1, g4588.t1, g15817.t1, g63.t1, g51.t1, g43.t1, g47.t1, g15291.t1, g1088.t1, g15288.t1, g2249.t1, g45.t1, g55.t1, g2248.t1, g16739.t1
Polypedilum pembai PPEMB 29 g2638.t1, g2637.t1, g10779.t1, g14607.t1, g2633.t1, g2631.t1, g9857.t1, g9322.t1, g2628.t1, g9321.t1, g3314.t1, g2635.t1, g2630.t1, g9319.t1, g2640.t1, g11044.t1, g9320.t1, g1688.t1, g8042.t1, g14606.t1, g2636.t1, g12137.t1, g2627.t1, g2639.t1, g2629.t1, g2634.t1, g2632.t1, g10778.t1, g574.t1
Belgica antarctica BANTA 11 IU25_06261-mRNA-1, IU25_01059-mRNA-1, IU25_01058-mRNA-1, IU25_00722-mRNA-1, IU25_06002-mRNA-1, IU25_09406-mRNA-1, IU25_06833-mRNA-1, IU25_06059-mRNA-1, IU25_06832-mRNA-1, IU25_03650-mRNA-1, IU25_08749-mRNA-1
Clunio marinus CMARI 8 CRK99482.1, CRL05220.1, CRL05219.1, CRK91124.1, CRL05217.1, CRL02226.1, CRL05227.1, CRL03720.1
Aedes aegypti lvpagwg AAEGYL 22 AAEL017061-PA, AAEL009128-PA, AAEL009120-PA, AAEL009124-PA, AAEL009121-PA, AAEL017556-PC, AAEL014893-PA, AAEL014891-PB, AAEL017539-PA, AAEL010158-PB, AAEL009132-PB, AAEL009137-PA, AAEL009117-PA, AAEL009133-PA, AAEL009127-PA, AAEL017297-PA, AAEL010151-PB, AAEL026582-PA, AAEL009126-PA, AAEL009125-PA, AAEL009138-PA, AAEL009122-PA
Culex quinquefasciatus quinquefasciatus CQUINQ 32 EDS26139.1, EDS44713.1, EDS26134.1, EDS44716.1, EDS26138.1, EDS44709.1, EDS32056.1, EDS44710.1, EDS44714.1, EDS32055.1, EDS44715.1, EDS44711.1, EDS26133.1, EDS26140.1, EDS38450.1, EDS26137.1, EDS26136.1, EDS38451.1, EDS32051.1, EDS38434.1, EDS44705.1, EDS35555.1, EDS45780.1, EDS44708.1, EDS38462.1, EDS38448.1, EDS44707.1, EDS26787.1, EDS44712.1, EDS38449.1, EDS32053.1, EDS32054.1
Culex quinquefasciatus CQUIN 32 CPIJ019705-PA, CPIJ005957-PA, CPIJ003376-PA, CPIJ016853-PA, CPIJ017462-PA, CPIJ005955-PA, CPIJ005900-PA, CPIJ019704-PA, CPIJ003375-PA, CPIJ005956-PA, CPIJ003378-PA, CPIJ016849-PA, CPIJ019703-PA, CPIJ016846-PA, CPIJ005953-PA, CPIJ016854-PA, CPIJ016855-PA, CPIJ016848-PA, CPIJ003389-PA, CPIJ016851-PA, CPIJ019702-PA, CPIJ016856-PA, CPIJ011129-PA, CPIJ016852-PA, CPIJ019700-PA, CPIJ003377-PA, CPIJ005952-PA, CPIJ005958-PA, CPIJ016850-PA, CPIJ016857-PA, CPIJ005959-PA, CPIJ003361-PA
Anopheles atroparvus AATRO 16 AATE001716-PA, AATE013389-PA, AATE012713-PA, AATE007802-PA, AATE000295-PA, AATE020700-PA, AATE013000-PA, AATE011402-PA, AATE013080-PA, AATE006465-PA, AATE018616-PA, AATE007323-PA, AATE015748-PA, AATE017577-PA, AATE021704-PA, AATE021705-PA
Anopheles sinensis china ASINEC 19 ASIC003137-PA, ASIC004048-PA, ASIC003129-PA, ASIC010653-PA, ASIC004047-PA, ASIC003128-PA, ASIC004044-PA, ASIC004046-PA, ASIC003135-PA, ASIC003136-PA, ASIC004049-PA, ASIC003139-PA, ASIC004045-PA, ASIC010654-PA, ASIC006840-PA, ASIC006839-PA, ASIC006842-PA, ASIC004039-PA, ASIC006838-PA
Anopheles dirus ADIRU 13 ADIR016078-PA, ADIR016072-PA, ADIR016098-PA, ADIR016076-PA, ADIR016102-PA, ADIR003458-PA, ADIR016071-PA, ADIR016073-PA, ADIR016100-PA, ADIR006361-PA, ADIR016070-PA, ADIR016074-PA, ADIR016077-PA
Anopheles farauti AFARA 13 AFAF004261-PA, AFAF016712-PA, AFAF002454-PA, AFAF003983-PA, AFAF008656-PA, AFAF005455-PA, AFAF005068-PA, AFAF017829-PA, AFAF016458-PA, AFAF004163-PA, AFAF020660-PA, AFAF012687-PA, AFAF016931-PA
Anopheles epiroticus AEPIR 17 AEPI015027-PA, AEPI015036-PA, AEPI015028-PA, AEPI015029-PA, AEPI015024-PA, AEPI015159-PA, AEPI015025-PA, AEPI015037-PA, AEPI015157-PA, AEPI015016-PA, AEPI015021-PA, AEPI015158-PA, AEPI015017-PA, AEPI015035-PA, AEPI015038-PA, AEPI015022-PA, AEPI015020-PA
Anopheles christyi ACHRI 8 ACHR015114-PA, ACHR004412-PA, ACHR005245-PA, ACHR008941-PA, ACHR007036-PA, ACHR015112-PA, ACHR004411-PA, ACHR015113-PA
Anopheles merus AMERU 17 AMEM003319-PA, AMEM010016-PA, AMEM008081-PA, AMEM006839-PA, AMEM019062-PA, AMEM005608-PA, AMEM002055-PA, AMEM018995-PA, AMEM014988-PA, AMEM015621-PA, AMEM013940-PA, AMEM018996-PA, AMEM011190-PA, AMEM002801-PA, AMEM010114-PA, AMEM000453-PA, AMEM006849-PA
Anopheles melas AMELA 18 AMEC018698-PA, AMEC005657-PA, AMEC016650-PA, AMEC002287-PA, AMEC017319-PA, AMEC016657-PA, AMEC015176-PA, AMEC008026-PA, AMEC003657-PA, AMEC013664-PA, AMEC006521-PA, AMEC012249-PA, AMEC013105-PA, AMEC006357-PA, AMEC012826-PA, AMEC018365-PA, AMEC004950-PA, AMEC008939-PA
Anopheles arabiensis AARAB 18 AARA004677-PA, AARA015642-PA, AARA015643-PA, AARA015644-PA, AARA015817-PA, AARA015798-PA, AARA004676-PA, AARA015789-PA, AARA015797-PA, AARA015796-PA, AARA015816-PA, AARA015788-PA, AARA004921-PA, AARA015787-PA, AARA015790-PA, AARA015800-PA, AARA015799-PA, AARA015791-PA
Anopheles coluzzii ACOLU 16 ACOM043127-PA, ACOM030355-PA, ACOM030349-PA, ACOM030348-PA, ACOM043130-PA, ACOM037569-PA, ACOM037568-PA, ACOM043126-PA, ACOM037571-PA, ACOM030354-PA, ACOM037567-PA, ACOM030351-PA, ACOM043128-PA, ACOM030356-PA, ACOM037570-PA, ACOM043129-PA
Anopheles coluzzii ngousso ACOLUN 18 ACON008209-PA, ACON008212-PA, ACON008207-PA, ACON008204-PA, ACON008206-PA, ACON008213-PA, ACON002865-PA, ACON002868-PA, ACON008208-PA, ACON013128-PA, ACON008203-PA, ACON012855-PA, ACON002862-PA, ACON008210-PA, ACON008214-PA, ACON002867-PA, ACON002866-PA, ACON002869-PA
Anopheles gambiae AGAMB 18 AGAP002869-PA, AGAP008209-PA, AGAP002866-PA, AGAP008206-PA, AGAP002868-PA, AGAP008208-PA, AGAP012855-PA, AGAP013128-PA, AGAP008204-PA, AGAP008212-PA, AGAP008207-PA, AGAP008213-PA, AGAP008210-PA, AGAP002867-PA, AGAP002865-PA, AGAP002862-PA, AGAP008214-PA, AGAP008203-PA
Anopheles quadriannulatus AQUAD 18 AQUA016044-PA, AQUA015980-PA, AQUA015939-PA, AQUA015907-PA, AQUA015996-PA, AQUA015906-PA, AQUA016045-PA, AQUA016000-PA, AQUA015997-PA, AQUA015937-PA, AQUA015978-PA, AQUA015940-PA, AQUA015979-PA, AQUA010542-PA, AQUA016046-PA, AQUA015938-PA, AQUA015976-PA, AQUA015981-PA
Anopheles minimus AMINI 12 AMIN016109-PA, AMIN006067-PA, AMIN016108-PA, AMIN006066-PA, AMIN003222-PA, AMIN006494-PA, AMIN006068-PA, AMIN016110-PA, AMIN016112-PA, AMIN006069-PA, AMIN016107-PA, AMIN016106-PA
Anopheles culicifacies ACULI 22 ACUA014797-PA, ACUA014070-PA, ACUA028009-PA, ACUA004667-PA, ACUA024793-PA, ACUA022181-PA, ACUA007205-PA, ACUA002823-PA, ACUA002167-PA, ACUA025948-PA, ACUA018140-PA, ACUA022042-PA, ACUA004175-PA, ACUA021425-PA, ACUA022152-PA, ACUA015589-PA, ACUA025674-PA, ACUA008332-PA, ACUA023058-PA, ACUA020263-PA, ACUA025166-PA, ACUA006792-PA
Anopheles funestus AFUNE 21 AFUN015888-PA, AFUN015961-PA, AFUN015960-PA, AFUN020895-PA, AFUN015794-PA, AFUN015962-PA, AFUN015785-PA, AFUN019365-PA, AFUN015802-PA, AFUN010918-PA, AFUN020636-PA, AFUN010921-PA, AFUN019475-PA, AFUN015889-PA, AFUN015786-PA, AFUN015797-PA, AFUN015792-PA, AFUN019401-PA, AFUN015796-PA, AFUN015795-PA, AFUN015801-PA
Anopheles stephensi indian ASTEPI 6 ASTEI03059-PA, ASTEI03060-PA, ASTEI03057-PA, ASTEI03056-PA, ASTEI00453-PA, ASTEI03058-PA
Anopheles stephensi ASTEP 19 ASTE016001-PA, ASTE015954-PA, ASTE015905-PA, ASTE015974-PA, ASTE015949-PA, ASTE015907-PA, ASTE015950-PA, ASTE005066-PA, ASTE005067-PA, ASTE016002-PA, ASTE015906-PA, ASTE015973-PA, ASTE015853-PA, ASTE015947-PA, ASTE015975-PA, ASTE015945-PA, ASTE015904-PA, ASTE015948-PA, ASTE015953-PA
Anopheles albimanus AALBI 18 AALB015620-PA, AALB015575-PA, AALB015572-PA, AALB015585-PA, AALB015589-PA, AALB015622-PA, AALB015737-PA, AALB015574-PA, AALB015576-PA, AALB001852-PA, AALB015584-PA, AALB001849-PA, AALB015588-PA, AALB015619-PA, AALB015621-PA, AALB015623-PA, AALB015735-PA, AALB015736-PA
Anopheles darlingi ADARL 19 ADAC002556-PA, ADAC002555-PA, ADAC010280-PA, ADAC002563-PA, ADAC002559-PA, ADAC002560-PA, ADAC010276-PA, ADAC010278-PA, ADAC002567-PA, ADAC002557-PA, ADAC002562-PA, ADAC010279-PA, ADAC010277-PA, ADAC002558-PA, ADAC002565-PA, ADAC002566-PA, ADAC001783-PA, ADAC001784-PA, ADAC002561-PA
Drosophila willistoni DWILL 17 FBpp0250659, FBpp0250949, FBpp0248540, FBpp0251294, FBpp0250656, FBpp0250654, FBpp0378568, FBpp0250658, FBpp0244786, FBpp0376273, FBpp0250657, FBpp0250951, FBpp0250950, FBpp0379692, FBpp0244784, FBpp0250655, FBpp0250652
Drosophila pseudoobscura DPSEU 10 FBpp0277141, FBpp0287837, FBpp0278323, FBpp0278326, FBpp0276199, FBpp0278324, FBpp0278327, FBpp0276198, FBpp0278328, FBpp0278329
Drosophila persimilis DPERS 11 FBpp0174478, FBpp0175080, FBpp0175817, FBpp0175816, FBpp0190749, FBpp0174480, FBpp0174476, FBpp0174481, FBpp0174479, FBpp0174482, FBpp0174477
Drosophila ananassae DANAN 13 FBpp0115558, FBpp0116980, FBpp0115494, FBpp0115771, FBpp0115829, FBpp0115492, FBpp0115557, FBpp0115772, FBpp0350793, FBpp0115493, FBpp0341569, FBpp0115828, FBpp0115827
Drosophila melanogaster DMELA 13 FBpp0309923, FBpp0087770, FBpp0289404, FBpp0086583, FBpp0086580, FBpp0084553, FBpp0289405, FBpp0085466, FBpp0086581, FBpp0311645, FBpp0086582, FBpp0086585, FBpp0086586
Drosophila sechellia DSECH 15 FBpp0203054, FBpp0202326, FBpp0201644, FBpp0203055, FBpp0203058, FBpp0202521, FBpp0201646, FBpp0201647, FBpp0203057, FBpp0202522, FBpp0191870, FBpp0199485, FBpp0203056, FBpp0202157, FBpp0201645
Drosophila simulans DSIMU 12 FBpp0315040, FBpp0224047, FBpp0208702, FBpp0221042, FBpp0209484, FBpp0224049, FBpp0323030, FBpp0318022, FBpp0319765, FBpp0318326, FBpp0209489, FBpp0209485
Drosophila erecta DEREC 12 FBpp0141912, FBpp0140933, FBpp0130099, FBpp0139035, FBpp0140931, FBpp0367312, FBpp0140932, FBpp0139033, FBpp0142836, FBpp0129181, FBpp0371323, FBpp0129343
Drosophila yakuba DYAKU 14 FBpp0268748, FBpp0258630, FBpp0263995, FBpp0258628, FBpp0257286, FBpp0257285, FBpp0258627, FBpp0264219, FBpp0269475, FBpp0267950, FBpp0264218, FBpp0258629, FBpp0257284, FBpp0258631
Drosophila virilis DVIRI 10 FBpp0235043, FBpp0234596, FBpp0234595, FBpp0236137, FBpp0235041, FBpp0236136, FBpp0226763, FBpp0235003, FBpp0236139, FBpp0236135
Drosophila mojavensis DMOJA 13 FBpp0167917, FBpp0169446, FBpp0167525, FBpp0167524, FBpp0170111, FBpp0169447, FBpp0167523, FBpp0170110, FBpp0170068, FBpp0167526, FBpp0167918, FBpp0167921, FBpp0169445
Drosophila grimshawi DGRIM 14 FBpp0154041, FBpp0405126, FBpp0155004, FBpp0144604, FBpp0154675, FBpp0155006, FBpp0422389, FBpp0403395, FBpp0155001, FBpp0418260, FBpp0416122, FBpp0154711, FBpp0154712, FBpp0155005
Lucilia cuprina LCUPR 8 KNC24551, KNC33651, KNC33396, KNC33684, KNC33646, KNC33652, KNC33683, KNC33647
Musca domestica MDOME 27 MDOA001039-PB, MDOA005576-PA, MDOA012058-PA, MDOA009487-PA, MDOA004600-PA, MDOA003763-PA, MDOA011819-PA, MDOA001765-PA, MDOA005138-PB, MDOA009902-PA, MDOA014502-PA, MDOA013678-PA, MDOA001337-PA, MDOA002883-PB, MDOA011691-PA, MDOA005094-PA, MDOA014819-PA, MDOA014116-PA, MDOA001447-PA, MDOA007743-PA, MDOA012471-PA, MDOA016778-PA, MDOA005584-PB, MDOA014776-PB, MDOA015036-PA, MDOA013071-PB, MDOA005995-PB
Stomoxys calcitrans SCALC 27 SCAU010268-PA, SCAU010711-PA, SCAU008261-PA, SCAU009249-PA, SCAU015645-PA, SCAU010974-PA, SCAU004657-PA, SCAU001885-PA, SCAU000794-PA, SCAU009304-PA, SCAU000185-PA, SCAU008895-PA, SCAU009128-PA, SCAU005854-PA, SCAU000508-PA, SCAU011105-PA, SCAU015413-PA, SCAU000330-PA, SCAU000605-PA, SCAU013818-PA, SCAU012921-PA, SCAU015670-PA, SCAU003193-PA, SCAU011447-PA, SCAU010740-PB, SCAU001402-PA, SCAU002120-PA
Glossina brevipalpis GBREV 5 GBRI042867-PA, GBRI019126-PA, GBRI043268-PA, GBRI019139-PA, GBRI019125-PA
Glossina palpalis GPALP 6 GPPI018554-PA, GPPI005898-PA, GPPI018558-PA, GPPI011929-PA, GPPI044183-PA, GPPI018553-PA
Glossina austeni GAUST 3 GAUT048610-PA, GAUT048611-PA, GAUT002925-PA
Glossina pallidipes GPALL 7 GPAI028847-PA, GPAI020990-PA, GPAI020978-PA, GPAI020981-PA, GPAI014971-PA, GPAI025857-PA, GPAI022706-PA
Glossina morsitans GMORS 3 GMOY010635-PA, GMOY010636-PA, GMOY003204-PA

Gene tree

Chironomidae-wide analysis

The Orthogroup for the longest transcript (g45.t1) is OG0001193. Other genes in this orthogroup contains the following. [This data uses ab initio gene models predicted in Yoshida et al 2022, so most genes are not registered in public databases. Please contact the authors for more information on these data.]

Conservation

Organism Abb. ID Ortholog ID
Podonomus sp PODON TRINITY_DN32203_c0_g1_i2.p1, TRINITY_DN22414_c2_g1_i1.p1, TRINITY_DN2851_c3_g1_i1.p1, TRINITY_DN54749_c0_g1_i1.p1, TRINITY_DN44059_c0_g1_i4.p1, TRINITY_DN17815_c0_g1_i1.p1, TRINITY_DN26548_c0_g1_i1.p1, TRINITY_DN28274_c0_g1_i1.p2, TRINITY_DN3586_c0_g1_i11.p1, TRINITY_DN28366_c0_g1_i1.p1, TRINITY_DN43004_c0_g1_i1.p1, TRINITY_DN139445_c0_g1_i1.p1, TRINITY_DN18814_c0_g1_i1.p1
Parochlus steinenii PSTEI PSG01440, PSG04216
Trissopelopia nemorum TNEMO TRINITY_DN14443_c0_g1_i1.p1, TRINITY_DN17237_c0_g1_i1.p1
Paraheptagyia tonnoiri PTONN TRINITY_DN8539_c0_g1_i3.p1, TRINITY_DN6458_c0_g1_i1.p1, TRINITY_DN3837_c0_g1_i1.p1, TRINITY_DN14772_c0_g1_i1.p1
Telmatogeton pecinata TPECI TRINITY_DN32331_c0_g1_i1.p1, TRINITY_DN27600_c0_g1_i1.p1
Cricotopus draysoni CDRAY TRINITY_DN55695_c0_g1_i1.p1, TRINITY_DN20026_c0_g1_i1.p1, TRINITY_DN96189_c0_g1_i1.p1
Clunio marinus CMARI none
Cardiocladius sp CARDI TRINITY_DN7334_c0_g1_i2.p1, TRINITY_DN52044_c0_g1_i1.p1, TRINITY_DN16762_c0_g1_i1.p1, TRINITY_DN38140_c0_g1_i1.p1, TRINITY_DN37093_c0_g1_i1.p1
Belgica antarctica BANTA none
Kiefferophyes invenustulus KINVE TRINITY_DN5995_c0_g1_i2.p1, TRINITY_DN260568_c0_g1_i1.p1, TRINITY_DN239889_c0_g1_i1.p1, TRINITY_DN239831_c0_g1_i1.p1, TRINITY_DN209806_c0_g1_i1.p1, TRINITY_DN62615_c0_g3_i1.p1, TRINITY_DN62615_c0_g1_i1.p1, TRINITY_DN177577_c0_g1_i1.p1, TRINITY_DN50164_c0_g1_i1.p1
Chironomus riparius CRIPA g4645.t1, g17790.t1
Chironomus columbiensis CCOLU TRINITY_DN8760_c0_g2_i1.p1, TRINITY_DN10576_c0_g1_i3.p1, TRINITY_DN4218_c0_g1_i4.p1, TRINITY_DN6376_c0_g1_i2.p1
Chironomus tentans CTENT none
Chironomus dilutus CDILU none
Polypedilum nubifer PNUBI none
Polypedilum vanderplanki PVAND g43.t1, g53.t1, g45.t1
Polypedilum pembai PPEMB none
Culicoides sonorensis CSONO CSON005506-1
Aedes aegypti lvpagwg AAEGYL none
Anopheles gambiae AGAMB AGAP008210-PA

Gene tree

Expression profile for this gene

Gene-level expression profile

Raw TPM values

Expression profile of isoforms

A heatmap representing isoforms with TPM > 0 in at least one sample. Expression profiles were are clustered based on the spearman correlation